BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP11_FL5_P22
(812 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U50135-6|AAN63429.1| 925|Caenorhabditis elegans Hypothetical pr... 105 3e-23
U23511-13|AAC46800.1| 770|Caenorhabditis elegans Hypothetical p... 44 1e-04
U40945-6|AAS80346.1| 437|Caenorhabditis elegans Hypothetical pr... 35 0.060
U40945-5|AAS80344.1| 617|Caenorhabditis elegans Hypothetical pr... 35 0.060
Z70780-6|CAA94823.1| 614|Caenorhabditis elegans Hypothetical pr... 35 0.080
Z81529-12|CAB04303.1| 492|Caenorhabditis elegans Hypothetical p... 34 0.11
AL023816-5|CAA19434.1| 492|Caenorhabditis elegans Hypothetical ... 34 0.11
U41273-2|AAA82454.2| 306|Caenorhabditis elegans Hypothetical pr... 33 0.18
AC025721-1|AAK29910.1| 295|Caenorhabditis elegans Hypothetical ... 32 0.42
Z73102-2|CAB63428.1| 341|Caenorhabditis elegans Hypothetical pr... 31 0.74
Z73102-1|CAA97419.1| 298|Caenorhabditis elegans Hypothetical pr... 31 0.74
Z70208-5|CAA94134.1| 201|Caenorhabditis elegans Hypothetical pr... 31 0.74
AF025464-4|AAB71017.3| 310|Caenorhabditis elegans Mnat (menage ... 31 0.74
Z81556-2|CAB04525.2| 445|Caenorhabditis elegans Hypothetical pr... 31 0.98
U67953-1|AAQ91892.1| 398|Caenorhabditis elegans Hypothetical pr... 31 0.98
U80442-6|AAB37669.1| 294|Caenorhabditis elegans Hypothetical pr... 30 1.7
AL117202-18|CAB57896.3| 765|Caenorhabditis elegans Hypothetical... 30 1.7
U40414-1|AAA81404.2| 543|Caenorhabditis elegans Hypothetical pr... 30 2.3
AF101318-6|AAC69348.2| 946|Caenorhabditis elegans Hypothetical ... 30 2.3
Z83127-3|CAB05629.2| 291|Caenorhabditis elegans Hypothetical pr... 29 3.0
U40799-2|AAA81480.1| 712|Caenorhabditis elegans Hypothetical pr... 29 3.0
AL032639-3|CAA21635.1| 283|Caenorhabditis elegans Hypothetical ... 29 3.0
AC006607-11|AAN63459.1| 1080|Caenorhabditis elegans Hypothetical... 29 3.0
AC006607-10|AAN63458.1| 1114|Caenorhabditis elegans Hypothetical... 29 3.0
AC006607-6|AAF60370.2| 496|Caenorhabditis elegans Hypothetical ... 29 3.0
U23511-12|AAC46798.2| 610|Caenorhabditis elegans Hypothetical p... 29 4.0
U23449-4|AAC24299.2| 534|Caenorhabditis elegans Hypothetical pr... 29 4.0
AL032651-2|CAB60579.1| 272|Caenorhabditis elegans Hypothetical ... 29 4.0
AF016677-3|AAL11110.2| 216|Caenorhabditis elegans Hypothetical ... 29 4.0
Z81505-1|CAB04122.1| 673|Caenorhabditis elegans Hypothetical pr... 29 5.2
U20864-11|AAV58867.1| 583|Caenorhabditis elegans C. elegans ADA... 29 5.2
U20864-10|AAK68355.1| 596|Caenorhabditis elegans C. elegans ADA... 29 5.2
AC024849-1|AAK68546.2| 374|Caenorhabditis elegans Hypothetical ... 29 5.2
AC024826-17|AAF60789.1| 662|Caenorhabditis elegans Hypothetical... 29 5.2
Z93393-11|CAB07698.2| 536|Caenorhabditis elegans Hypothetical p... 28 6.9
Z19156-1|CAA79563.1| 160|Caenorhabditis elegans Hypothetical pr... 28 6.9
U41010-4|AAV28333.1| 1622|Caenorhabditis elegans Hypothetical pr... 28 6.9
U23454-9|AAC46522.2| 249|Caenorhabditis elegans Hypothetical pr... 28 6.9
AF088285-1|AAC98292.1| 536|Caenorhabditis elegans caspase-relat... 28 6.9
AF040651-1|AAB95013.4| 691|Caenorhabditis elegans Nhl (ring fin... 28 6.9
AC025724-1|AAG23375.2| 4177|Caenorhabditis elegans Enhancer of e... 28 6.9
AC006607-7|AAL00855.1| 789|Caenorhabditis elegans Hypothetical ... 28 6.9
Z81118-6|CAI46578.1| 1203|Caenorhabditis elegans Hypothetical pr... 28 9.1
Z81118-5|CAB03330.2| 1205|Caenorhabditis elegans Hypothetical pr... 28 9.1
Z81050-13|CAB02857.3| 448|Caenorhabditis elegans Hypothetical p... 28 9.1
Z22177-12|CAA80152.1| 974|Caenorhabditis elegans Hypothetical p... 28 9.1
Z19155-5|CAA79562.1| 974|Caenorhabditis elegans Hypothetical pr... 28 9.1
U80449-2|AAB37826.1| 112|Caenorhabditis elegans Hypothetical pr... 28 9.1
U61955-6|AAC24408.2| 505|Caenorhabditis elegans Hypothetical pr... 28 9.1
U58754-5|AAB00672.2| 330|Caenorhabditis elegans Serpentine rece... 28 9.1
U39997-9|AAA81101.2| 468|Caenorhabditis elegans Hypothetical pr... 28 9.1
AY032860-1|AAK52089.1| 1205|Caenorhabditis elegans EEA1 protein. 28 9.1
AC017117-2|AAF16617.1| 295|Caenorhabditis elegans Hypothetical ... 28 9.1
AC006608-5|ABC71834.1| 311|Caenorhabditis elegans Hypothetical ... 28 9.1
AC006608-4|AAF39758.2| 381|Caenorhabditis elegans Hypothetical ... 28 9.1
>U50135-6|AAN63429.1| 925|Caenorhabditis elegans Hypothetical
protein C52E12.1 protein.
Length = 925
Score = 105 bits (253), Expect = 3e-23
Identities = 59/162 (36%), Positives = 82/162 (50%), Gaps = 8/162 (4%)
Frame = +3
Query: 183 CVVCFKNVLYYSIGECDHPVCFECSTRMRVLCLQNECPICRK--DLLRVVFTDSIHPYKE 356
C +C K + IG C HPVC EC RMR+L CP+CR D+L TD
Sbjct: 89 CDICCKKNDVFGIGSCRHPVCAECVIRMRILGNSKTCPVCRSDIDILSFCTTDDDLANVP 148
Query: 357 LGNRE--YPDRLFERQYKIVFCSEDIKNAYENLLENRCKIC----DKIPPFRNFSLLNDH 518
L ++ +PD E +Y I F ++ YE L + CKIC + F +F L H
Sbjct: 149 LSFKKTAHPD---EDRYDIRFSNKIAGTKYEKYLAHVCKICKTDDGERLEFPSFMSLRQH 205
Query: 519 MKRVHEGFFCDLCVNHLKIFTNERRCYTRQELAHHRRKGDLE 644
M HE +C +C ++L +F+ ER+ YTR +L H R GD +
Sbjct: 206 MASRHEQSYCHICTDNLNLFSRERKTYTRDQLQRHMRSGDFD 247
Score = 53.2 bits (122), Expect = 2e-07
Identities = 18/35 (51%), Positives = 26/35 (74%)
Frame = +1
Query: 643 NDTSHRGHPLCEFCXKRFMDPDELYRHLRKEHLYC 747
+D S +GHP C FC ++F+D + YRHLRK+H +C
Sbjct: 247 DDKSFKGHPQCLFCEQKFLDEENRYRHLRKDHFFC 281
>U23511-13|AAC46800.1| 770|Caenorhabditis elegans Hypothetical
protein C32D5.11 protein.
Length = 770
Score = 44.4 bits (100), Expect = 1e-04
Identities = 29/101 (28%), Positives = 46/101 (45%), Gaps = 4/101 (3%)
Frame = +3
Query: 84 SEFNKTLGYRNAFTES*INNTTIMSEAQANENTCVVCFKNVLYYS--IGECDHPVCFECS 257
+ F KT+G ++ E I + + S E C +C I C+H CF C
Sbjct: 37 NSFIKTMG--DSGVEPVIPSPSTSSNNPVEELQCTICLSTRFSQECRIEGCNHSFCFSCI 94
Query: 258 TRMRVLCLQNECPICRKDLLRVV--FTDSIHPYKELGNREY 374
+ L+ CP+CRKD+ +V F++ KE+ +EY
Sbjct: 95 SEWVCQSLRPSCPMCRKDVDKVSYDFSEQKLGQKEIAIKEY 135
>U40945-6|AAS80346.1| 437|Caenorhabditis elegans Hypothetical
protein F10D7.5c protein.
Length = 437
Score = 35.1 bits (77), Expect = 0.060
Identities = 19/58 (32%), Positives = 29/58 (50%), Gaps = 2/58 (3%)
Frame = +3
Query: 165 QANE-NTCVVCFKNVLYYSIGECDHP-VCFECSTRMRVLCLQNECPICRKDLLRVVFT 332
+ NE + C +C + + C H +CFEC R+ L + CPICR + V+ T
Sbjct: 379 EVNEGDECTICMDAPVNSVLYTCGHMCMCFECGRRL--LTTKGTCPICRAPVQDVIKT 434
>U40945-5|AAS80344.1| 617|Caenorhabditis elegans Hypothetical
protein F10D7.5a protein.
Length = 617
Score = 35.1 bits (77), Expect = 0.060
Identities = 19/58 (32%), Positives = 29/58 (50%), Gaps = 2/58 (3%)
Frame = +3
Query: 165 QANE-NTCVVCFKNVLYYSIGECDHP-VCFECSTRMRVLCLQNECPICRKDLLRVVFT 332
+ NE + C +C + + C H +CFEC R+ L + CPICR + V+ T
Sbjct: 559 EVNEGDECTICMDAPVNSVLYTCGHMCMCFECGRRL--LTTKGTCPICRAPVQDVIKT 614
>Z70780-6|CAA94823.1| 614|Caenorhabditis elegans Hypothetical
protein F46B6.7 protein.
Length = 614
Score = 34.7 bits (76), Expect = 0.080
Identities = 18/41 (43%), Positives = 25/41 (60%)
Frame = +3
Query: 405 IVFCSEDIKNAYENLLENRCKICDKIPPFRNFSLLNDHMKR 527
+VF +E I++ E L N C C+KI P RN L DHM++
Sbjct: 339 LVFVTEYIEHLKEKLHRNECIYCEKIFPDRN--TLMDHMRK 377
>Z81529-12|CAB04303.1| 492|Caenorhabditis elegans Hypothetical
protein T05G11.1 protein.
Length = 492
Score = 34.3 bits (75), Expect = 0.11
Identities = 12/28 (42%), Positives = 16/28 (57%)
Frame = +1
Query: 670 LCEFCXKRFMDPDELYRHLRKEHLYCHL 753
LC C K F D + L H R+ H+ CH+
Sbjct: 13 LCGICGKYFSDDESLREHRRQRHMTCHM 40
>AL023816-5|CAA19434.1| 492|Caenorhabditis elegans Hypothetical
protein T05G11.1 protein.
Length = 492
Score = 34.3 bits (75), Expect = 0.11
Identities = 12/28 (42%), Positives = 16/28 (57%)
Frame = +1
Query: 670 LCEFCXKRFMDPDELYRHLRKEHLYCHL 753
LC C K F D + L H R+ H+ CH+
Sbjct: 13 LCGICGKYFSDDESLREHRRQRHMTCHM 40
>U41273-2|AAA82454.2| 306|Caenorhabditis elegans Hypothetical
protein C26B9.6 protein.
Length = 306
Score = 33.5 bits (73), Expect = 0.18
Identities = 15/57 (26%), Positives = 27/57 (47%), Gaps = 1/57 (1%)
Frame = +3
Query: 165 QANENTCVVCF-KNVLYYSIGECDHPVCFECSTRMRVLCLQNECPICRKDLLRVVFT 332
Q + + C +C+ K + I C H C+ C + N+CP+CR + +F+
Sbjct: 101 QQDHDICYICYYKLTIPTRIENCGHEFCYVCLKSN--FAMGNDCPVCRGKISPSLFS 155
>AC025721-1|AAK29910.1| 295|Caenorhabditis elegans Hypothetical
protein Y48G8AL.9 protein.
Length = 295
Score = 32.3 bits (70), Expect = 0.42
Identities = 11/22 (50%), Positives = 15/22 (68%)
Frame = +1
Query: 673 CEFCXKRFMDPDELYRHLRKEH 738
C+ C RF+D D L H+R+EH
Sbjct: 256 CKLCGTRFLDMDPLLTHIRQEH 277
>Z73102-2|CAB63428.1| 341|Caenorhabditis elegans Hypothetical
protein B0035.1b protein.
Length = 341
Score = 31.5 bits (68), Expect = 0.74
Identities = 13/37 (35%), Positives = 19/37 (51%)
Frame = +1
Query: 667 PLCEFCXKRFMDPDELYRHLRKEHLYCHLV*CRWKXF 777
P C +C + F D L +H + +H CH+ C K F
Sbjct: 11 PWCWYCNREFDDEKILIQHQKAKHFKCHI--CHKKLF 45
>Z73102-1|CAA97419.1| 298|Caenorhabditis elegans Hypothetical
protein B0035.1a protein.
Length = 298
Score = 31.5 bits (68), Expect = 0.74
Identities = 13/37 (35%), Positives = 19/37 (51%)
Frame = +1
Query: 667 PLCEFCXKRFMDPDELYRHLRKEHLYCHLV*CRWKXF 777
P C +C + F D L +H + +H CH+ C K F
Sbjct: 11 PWCWYCNREFDDEKILIQHQKAKHFKCHI--CHKKLF 45
>Z70208-5|CAA94134.1| 201|Caenorhabditis elegans Hypothetical
protein F54B11.5 protein.
Length = 201
Score = 31.5 bits (68), Expect = 0.74
Identities = 14/52 (26%), Positives = 22/52 (42%)
Frame = +3
Query: 150 IMSEAQANENTCVVCFKNVLYYSIGECDHPVCFECSTRMRVLCLQNECPICR 305
I+++ E CV+C +N+ + C H C C CPIC+
Sbjct: 118 ILTQTSDVEGNCVICMENINDLLL-PCLHAFCIRCIANEMEYRHDFSCPICK 168
>AF025464-4|AAB71017.3| 310|Caenorhabditis elegans Mnat (menage a
trois) tfiih subunitprotein 1 protein.
Length = 310
Score = 31.5 bits (68), Expect = 0.74
Identities = 20/79 (25%), Positives = 33/79 (41%)
Frame = +3
Query: 207 LYYSIGECDHPVCFECSTRMRVLCLQNECPICRKDLLRVVFTDSIHPYKELGNREYPDRL 386
L I EC HP+C C + L N C +C + L + F + I+ + + R
Sbjct: 17 LVMMINECGHPLCKNCVDNIFALNSGN-CHVCNRVLRKNNFREQIYEDPLIDKETFLRRK 75
Query: 387 FERQYKIVFCSEDIKNAYE 443
+ Y + +D +N E
Sbjct: 76 LRKIYNLK--QDDFENLRE 92
>Z81556-2|CAB04525.2| 445|Caenorhabditis elegans Hypothetical
protein F58G1.2 protein.
Length = 445
Score = 31.1 bits (67), Expect = 0.98
Identities = 16/42 (38%), Positives = 19/42 (45%)
Frame = +1
Query: 667 PLCEFCXKRFMDPDELYRHLRKEHLYCHLV*CRWKXFLLCLH 792
P C FC KRF + HL K+H C F+ CLH
Sbjct: 229 PQCPFCDKRFRNDISFNNHLTKKHPEC-------AEFVQCLH 263
>U67953-1|AAQ91892.1| 398|Caenorhabditis elegans Hypothetical
protein ZC13.1b protein.
Length = 398
Score = 31.1 bits (67), Expect = 0.98
Identities = 20/69 (28%), Positives = 31/69 (44%)
Frame = +3
Query: 114 NAFTES*INNTTIMSEAQANENTCVVCFKNVLYYSIGECDHPVCFECSTRMRVLCLQNEC 293
N T+S + ++ E E C VC ++L EC H C C L ++ C
Sbjct: 318 NLLTDSSVGTKSVDHE----EQPCAVCHGDLLQPIKLECTHVFCKFCIETW--LDQKSTC 371
Query: 294 PICRKDLLR 320
PICR ++ +
Sbjct: 372 PICRAEVTK 380
>U80442-6|AAB37669.1| 294|Caenorhabditis elegans Hypothetical
protein T20F5.7 protein.
Length = 294
Score = 30.3 bits (65), Expect = 1.7
Identities = 22/82 (26%), Positives = 35/82 (42%), Gaps = 7/82 (8%)
Frame = +3
Query: 180 TCVVCFKN----VLYYSIGECDHPVCFECSTRMR---VLCLQNECPICRKDLLRVVFTDS 338
TC++C + + C H VC EC+ +R L CP CR+ R V
Sbjct: 14 TCLICIREFDTKTRKPKVLHCGHTVCEECTDNLRDFNAPLLVVRCPTCRQFTKRPVAESC 73
Query: 339 IHPYKELGNREYPDRLFERQYK 404
++ +G ++ FER+ K
Sbjct: 74 NTNFQLMGYLAEKEK-FEREKK 94
>AL117202-18|CAB57896.3| 765|Caenorhabditis elegans Hypothetical
protein Y47D3A.22 protein.
Length = 765
Score = 30.3 bits (65), Expect = 1.7
Identities = 13/47 (27%), Positives = 23/47 (48%)
Frame = +3
Query: 174 ENTCVVCFKNVLYYSIGECDHPVCFECSTRMRVLCLQNECPICRKDL 314
E C +C ++ + C H C +C+ + L+ +C ICRK +
Sbjct: 717 ETNCAICM-DLKIAVVFNCGHTACVDCADK-----LKKQCHICRKTI 757
>U40414-1|AAA81404.2| 543|Caenorhabditis elegans Hypothetical
protein F53B3.1 protein.
Length = 543
Score = 29.9 bits (64), Expect = 2.3
Identities = 11/24 (45%), Positives = 14/24 (58%)
Frame = +1
Query: 667 PLCEFCXKRFMDPDELYRHLRKEH 738
P C FC KRF + L +H K+H
Sbjct: 327 PQCPFCDKRFRNEFSLKKHFAKKH 350
Score = 29.1 bits (62), Expect = 4.0
Identities = 9/32 (28%), Positives = 17/32 (53%)
Frame = +1
Query: 673 CEFCXKRFMDPDELYRHLRKEHLYCHLV*CRW 768
C FC +F+ P +L +H + H++ C +
Sbjct: 415 CSFCNMKFLTPRKLRKHKKMSHVFTKTFQCHF 446
>AF101318-6|AAC69348.2| 946|Caenorhabditis elegans Hypothetical
protein Y73C8C.8 protein.
Length = 946
Score = 29.9 bits (64), Expect = 2.3
Identities = 23/102 (22%), Positives = 44/102 (43%)
Frame = +3
Query: 240 VCFECSTRMRVLCLQNECPICRKDLLRVVFTDSIHPYKELGNREYPDRLFERQYKIVFCS 419
+ FE VL ++N K +++ K + RE+ FERQ + +
Sbjct: 766 ILFEMLKAQAVLEVENPMNKINKMTSKLIQVSKNRENKIISKREFI--YFERQIRGY--T 821
Query: 420 EDIKNAYENLLENRCKICDKIPPFRNFSLLNDHMKRVHEGFF 545
++++N + + N D+IP RNF +D + ++ F
Sbjct: 822 KEVENRIKIIRSNEQISSDQIPELRNFPTFSDEFLKAYKDTF 863
>Z83127-3|CAB05629.2| 291|Caenorhabditis elegans Hypothetical
protein T23F6.3 protein.
Length = 291
Score = 29.5 bits (63), Expect = 3.0
Identities = 20/70 (28%), Positives = 30/70 (42%), Gaps = 2/70 (2%)
Frame = +3
Query: 183 CVVCFKN-VLYYSIGECDHPV-CFECSTRMRVLCLQNECPICRKDLLRVVFTDSIHPYKE 356
C VCF+ V C + + C C R Q CP+CR+ R + T + P +
Sbjct: 210 CTVCFETPVDPQGCNRCMNVIGCKTCVQRWHRSSTQPSCPLCRR---RWIATPDVSPMEI 266
Query: 357 LGNREYPDRL 386
+ +R RL
Sbjct: 267 IKSRRQSFRL 276
>U40799-2|AAA81480.1| 712|Caenorhabditis elegans Hypothetical
protein F42C5.4 protein.
Length = 712
Score = 29.5 bits (63), Expect = 3.0
Identities = 11/34 (32%), Positives = 19/34 (55%)
Frame = +3
Query: 219 IGECDHPVCFECSTRMRVLCLQNECPICRKDLLR 320
+ C+H +C +C + ECPIC++ L+R
Sbjct: 51 VSSCNHSLCSQCFDKF------TECPICKEPLVR 78
>AL032639-3|CAA21635.1| 283|Caenorhabditis elegans Hypothetical
protein Y38F1A.2 protein.
Length = 283
Score = 29.5 bits (63), Expect = 3.0
Identities = 15/68 (22%), Positives = 26/68 (38%), Gaps = 4/68 (5%)
Frame = +3
Query: 114 NAFTES*INNTTIMSEAQANENTCVVCFKNVLYYSIGECDHPVCFECS----TRMRVLCL 281
NA I I + + C +C N + + +C H C EC + + +
Sbjct: 82 NAERNQIITQRRISEALHQSSHECPICLANASFPVLTDCGHIFCCECIIQYWQQSKAIVT 141
Query: 282 QNECPICR 305
+C +CR
Sbjct: 142 PCDCAMCR 149
>AC006607-11|AAN63459.1| 1080|Caenorhabditis elegans Hypothetical
protein C09E7.8b protein.
Length = 1080
Score = 29.5 bits (63), Expect = 3.0
Identities = 20/72 (27%), Positives = 33/72 (45%), Gaps = 3/72 (4%)
Frame = +3
Query: 111 RNAFTES*INNTTIMSEAQANENTCVVCFKNVLYYSIG---ECDHPVCFECSTRMRVLCL 281
R F++ I +I S + ++ C +C + + +C EC+T+ L
Sbjct: 1003 RKLFSQPNIVTASITS-TELDDTECAICLDEMTNFKETIKCQCRRRFHLECATKW--LNE 1059
Query: 282 QNECPICRKDLL 317
+ ECP CRK LL
Sbjct: 1060 KRECPTCRKLLL 1071
>AC006607-10|AAN63458.1| 1114|Caenorhabditis elegans Hypothetical
protein C09E7.8a protein.
Length = 1114
Score = 29.5 bits (63), Expect = 3.0
Identities = 20/72 (27%), Positives = 33/72 (45%), Gaps = 3/72 (4%)
Frame = +3
Query: 111 RNAFTES*INNTTIMSEAQANENTCVVCFKNVLYYSIG---ECDHPVCFECSTRMRVLCL 281
R F++ I +I S + ++ C +C + + +C EC+T+ L
Sbjct: 1037 RKLFSQPNIVTASITS-TELDDTECAICLDEMTNFKETIKCQCRRRFHLECATKW--LNE 1093
Query: 282 QNECPICRKDLL 317
+ ECP CRK LL
Sbjct: 1094 KRECPTCRKLLL 1105
>AC006607-6|AAF60370.2| 496|Caenorhabditis elegans Hypothetical
protein C09E7.5 protein.
Length = 496
Score = 29.5 bits (63), Expect = 3.0
Identities = 18/65 (27%), Positives = 32/65 (49%), Gaps = 5/65 (7%)
Frame = +3
Query: 138 NNTTIMS--EAQANENTCVVCFKNVLYYSIG---ECDHPVCFECSTRMRVLCLQNECPIC 302
NNT +S ++ ++ C +C + + + EC +C+T+ L + ECP C
Sbjct: 425 NNTVTVSAPSSELDDTECAICLEEMYNFKETIKCECRRRFHSKCATKW--LNEKRECPTC 482
Query: 303 RKDLL 317
RK +L
Sbjct: 483 RKLML 487
>U23511-12|AAC46798.2| 610|Caenorhabditis elegans Hypothetical
protein C32D5.10 protein.
Length = 610
Score = 29.1 bits (62), Expect = 4.0
Identities = 13/50 (26%), Positives = 21/50 (42%), Gaps = 1/50 (2%)
Frame = +3
Query: 159 EAQANENTCVVCFKNVL-YYSIGECDHPVCFECSTRMRVLCLQNECPICR 305
E E C VC ++ S+ +C H C++C CP+C+
Sbjct: 33 EIDEPEEECSVCKNEIIDTTSLSDCCHEFCYDCIVGWLTKGSGPFCPMCK 82
>U23449-4|AAC24299.2| 534|Caenorhabditis elegans Hypothetical
protein K06A1.5 protein.
Length = 534
Score = 29.1 bits (62), Expect = 4.0
Identities = 12/44 (27%), Positives = 25/44 (56%)
Frame = +3
Query: 489 FRNFSLLNDHMKRVHEGFFCDLCVNHLKIFTNERRCYTRQELAH 620
F+N+SLL++ +++ H + H K N+R ++E+A+
Sbjct: 30 FKNYSLLDEQLQQSHRSRSVSVNDEHFKGNVNDRLAVMKEEMAN 73
>AL032651-2|CAB60579.1| 272|Caenorhabditis elegans Hypothetical
protein Y6D1A.2 protein.
Length = 272
Score = 29.1 bits (62), Expect = 4.0
Identities = 11/28 (39%), Positives = 15/28 (53%)
Frame = +3
Query: 225 ECDHPVCFECSTRMRVLCLQNECPICRK 308
+C H +C EC TR+ +CP RK
Sbjct: 202 DCGHTICHECITRIHKPTEPFKCPFDRK 229
>AF016677-3|AAL11110.2| 216|Caenorhabditis elegans Hypothetical
protein ZK1240.9 protein.
Length = 216
Score = 29.1 bits (62), Expect = 4.0
Identities = 11/28 (39%), Positives = 17/28 (60%)
Frame = +3
Query: 225 ECDHPVCFECSTRMRVLCLQNECPICRK 308
+C H VC C+T++ + L CP CR+
Sbjct: 26 KCGHSVCQNCATQL-ITALLIICPFCRE 52
>Z81505-1|CAB04122.1| 673|Caenorhabditis elegans Hypothetical
protein F16A11.1 protein.
Length = 673
Score = 28.7 bits (61), Expect = 5.2
Identities = 14/56 (25%), Positives = 26/56 (46%), Gaps = 1/56 (1%)
Frame = +3
Query: 150 IMSEAQANENTCVVCFKNVLYYSIGECDHP-VCFECSTRMRVLCLQNECPICRKDL 314
++ + E+ C +CF ++ C+H C +C M + CP+CRK +
Sbjct: 553 LLEKEHIPEDYCTICFAAPGSTTLLPCNHDGFCSDCCNMM------DHCPLCRKPI 602
>U20864-11|AAV58867.1| 583|Caenorhabditis elegans C. elegans ADA-2
protein, isoform b protein.
Length = 583
Score = 28.7 bits (61), Expect = 5.2
Identities = 13/32 (40%), Positives = 17/32 (53%)
Frame = +3
Query: 189 VCFKNVLYYSIGECDHPVCFECSTRMRVLCLQ 284
VCF L + + H CFEC R+ +LC Q
Sbjct: 10 VCFNCTL--RVDQTIHVKCFECPLRICILCFQ 39
>U20864-10|AAK68355.1| 596|Caenorhabditis elegans C. elegans ADA-2
protein, isoform a protein.
Length = 596
Score = 28.7 bits (61), Expect = 5.2
Identities = 13/32 (40%), Positives = 17/32 (53%)
Frame = +3
Query: 189 VCFKNVLYYSIGECDHPVCFECSTRMRVLCLQ 284
VCF L + + H CFEC R+ +LC Q
Sbjct: 23 VCFNCTL--RVDQTIHVKCFECPLRICILCFQ 52
>AC024849-1|AAK68546.2| 374|Caenorhabditis elegans Hypothetical
protein Y67D8B.1 protein.
Length = 374
Score = 28.7 bits (61), Expect = 5.2
Identities = 12/33 (36%), Positives = 17/33 (51%)
Frame = +3
Query: 204 VLYYSIGECDHPVCFECSTRMRVLCLQNECPIC 302
+L +G C H +C C+T + N CPIC
Sbjct: 29 ILVPVLGACLHSICILCATGLE---SPNSCPIC 58
>AC024826-17|AAF60789.1| 662|Caenorhabditis elegans Hypothetical
protein Y55F3AM.14 protein.
Length = 662
Score = 28.7 bits (61), Expect = 5.2
Identities = 13/38 (34%), Positives = 20/38 (52%)
Frame = +1
Query: 619 IIDVKVTLNDTSHRGHPLCEFCXKRFMDPDELYRHLRK 732
I+ V ++ D G+ C FC K++ LY H+RK
Sbjct: 340 ILPVAGSVTDHQMVGNYECTFCNKKYPYASSLYIHMRK 377
>Z93393-11|CAB07698.2| 536|Caenorhabditis elegans Hypothetical
protein Y48E1B.13a protein.
Length = 536
Score = 28.3 bits (60), Expect = 6.9
Identities = 13/49 (26%), Positives = 25/49 (51%)
Frame = +3
Query: 330 TDSIHPYKELGNREYPDRLFERQYKIVFCSEDIKNAYENLLENRCKICD 476
T + KE +++ +F+R+ K C E +K ++ LL N + C+
Sbjct: 88 TKQVEKRKEPFSQKEIYAVFQRRIKSELCIETVKKKFQPLLPNAIQTCE 136
>Z19156-1|CAA79563.1| 160|Caenorhabditis elegans Hypothetical
protein T02C1.1 protein.
Length = 160
Score = 28.3 bits (60), Expect = 6.9
Identities = 14/41 (34%), Positives = 18/41 (43%)
Frame = +3
Query: 183 CVVCFKNVLYYSIGECDHPVCFECSTRMRVLCLQNECPICR 305
C VC + I EC H C C L + +CP+CR
Sbjct: 8 CAVCLDFFVEPCIIECGHSYCRFCIESH--LNINEKCPLCR 46
>U41010-4|AAV28333.1| 1622|Caenorhabditis elegans Hypothetical protein
T05A12.4a protein.
Length = 1622
Score = 28.3 bits (60), Expect = 6.9
Identities = 9/31 (29%), Positives = 16/31 (51%)
Frame = +3
Query: 183 CVVCFKNVLYYSIGECDHPVCFECSTRMRVL 275
C +C ++ + + C H +C C +MR L
Sbjct: 1346 CPICCASIDCFMVFTCGHRICQNCFEKMRAL 1376
>U23454-9|AAC46522.2| 249|Caenorhabditis elegans Hypothetical
protein C10A4.8 protein.
Length = 249
Score = 28.3 bits (60), Expect = 6.9
Identities = 17/41 (41%), Positives = 22/41 (53%), Gaps = 3/41 (7%)
Frame = +3
Query: 444 NLLENRCKICDKIPPFRNFSLLNDHMKRVHEG---FFCDLC 557
NL + RC +CDK F + L H KR+H G F C+ C
Sbjct: 164 NLKKYRCDVCDK--TFSRSNTLITH-KRIHTGEKPFKCEHC 201
>AF088285-1|AAC98292.1| 536|Caenorhabditis elegans caspase-related
protein 1A protein.
Length = 536
Score = 28.3 bits (60), Expect = 6.9
Identities = 13/49 (26%), Positives = 25/49 (51%)
Frame = +3
Query: 330 TDSIHPYKELGNREYPDRLFERQYKIVFCSEDIKNAYENLLENRCKICD 476
T + KE +++ +F+R+ K C E +K ++ LL N + C+
Sbjct: 88 TKQVEKRKEPFSQKEIYAVFQRRIKSELCIETVKKKFQPLLPNAIQTCE 136
>AF040651-1|AAB95013.4| 691|Caenorhabditis elegans Nhl (ring finger
b-box coiled coil)domain containing protein 3 protein.
Length = 691
Score = 28.3 bits (60), Expect = 6.9
Identities = 17/62 (27%), Positives = 27/62 (43%), Gaps = 6/62 (9%)
Frame = +3
Query: 141 NTTIMSEAQANENTCVVCFK-NVLYYSIGECDHPVCFECSTRMRVLCLQNE-----CPIC 302
N SE +TC+ + N + C H VC C T++ L + + CP+C
Sbjct: 14 NVDDFSETFLTCSTCLYTYDGNTRKPKLLPCSHSVCLFCVTQLAELSPETQPPTLRCPLC 73
Query: 303 RK 308
R+
Sbjct: 74 RE 75
>AC025724-1|AAG23375.2| 4177|Caenorhabditis elegans Enhancer of efl-1
mutant phenotypeprotein 1 protein.
Length = 4177
Score = 28.3 bits (60), Expect = 6.9
Identities = 18/50 (36%), Positives = 28/50 (56%), Gaps = 3/50 (6%)
Frame = +3
Query: 315 LRVVFTDSIHPYKELGNREYPDRLFE--RQYKIV-FCSEDIKNAYENLLE 455
L +V D+IHP EL +P E +++ I C ED+KN ++L+E
Sbjct: 1618 LLLVSNDTIHPCAELIVSIFPAMTEEWRKEHLIAEICGEDLKNMAKSLVE 1667
>AC006607-7|AAL00855.1| 789|Caenorhabditis elegans Hypothetical
protein C09E7.9 protein.
Length = 789
Score = 28.3 bits (60), Expect = 6.9
Identities = 19/72 (26%), Positives = 33/72 (45%), Gaps = 3/72 (4%)
Frame = +3
Query: 111 RNAFTES*INNTTIMSEAQANENTCVVCFKNVLYYSIG---ECDHPVCFECSTRMRVLCL 281
R F++ I ++ S + ++ C +C + + EC +C+T+ L
Sbjct: 712 RKLFSQPDIVTASVPS-TELDDTECAICLDEMTNFKETIKCECRRRFHLKCATKW--LNE 768
Query: 282 QNECPICRKDLL 317
+ ECP CRK LL
Sbjct: 769 KRECPTCRKLLL 780
>Z81118-6|CAI46578.1| 1203|Caenorhabditis elegans Hypothetical
protein T10G3.5b protein.
Length = 1203
Score = 27.9 bits (59), Expect = 9.1
Identities = 14/32 (43%), Positives = 14/32 (43%)
Frame = +1
Query: 643 NDTSHRGHPLCEFCXKRFMDPDELYRHLRKEH 738
ND G LC C PDEL H KEH
Sbjct: 41 NDQEIEGF-LCPMCMVELGGPDELTVHFEKEH 71
>Z81118-5|CAB03330.2| 1205|Caenorhabditis elegans Hypothetical
protein T10G3.5a protein.
Length = 1205
Score = 27.9 bits (59), Expect = 9.1
Identities = 14/32 (43%), Positives = 14/32 (43%)
Frame = +1
Query: 643 NDTSHRGHPLCEFCXKRFMDPDELYRHLRKEH 738
ND G LC C PDEL H KEH
Sbjct: 41 NDQEIEGF-LCPMCMVELGGPDELTVHFEKEH 71
>Z81050-13|CAB02857.3| 448|Caenorhabditis elegans Hypothetical
protein C50B6.8 protein.
Length = 448
Score = 27.9 bits (59), Expect = 9.1
Identities = 19/60 (31%), Positives = 26/60 (43%), Gaps = 5/60 (8%)
Frame = +3
Query: 141 NTTIMSEAQANE-----NTCVVCFKNVLYYSIGECDHPVCFECSTRMRVLCLQNECPICR 305
N T SE+ A + + C +C K Y D P C C T R LC+ + IC+
Sbjct: 31 NRTARSESPARQRHQRPSECSICGKTANGYHY---DVPSCNGCKTFFRRLCVSEKSFICK 87
>Z22177-12|CAA80152.1| 974|Caenorhabditis elegans Hypothetical
protein F54G8.4 protein.
Length = 974
Score = 27.9 bits (59), Expect = 9.1
Identities = 12/45 (26%), Positives = 18/45 (40%), Gaps = 1/45 (2%)
Frame = +3
Query: 180 TCVVCFKNVLYYSIGECDHPVCFECSTRMRVLCLQN-ECPICRKD 311
TC +C + C H C+ C +N +CP CR +
Sbjct: 42 TCPICLDRYKQPKLLPCQHTFCYPCLESCADTLHRNLKCPECRAE 86
>Z19155-5|CAA79562.1| 974|Caenorhabditis elegans Hypothetical
protein F54G8.4 protein.
Length = 974
Score = 27.9 bits (59), Expect = 9.1
Identities = 12/45 (26%), Positives = 18/45 (40%), Gaps = 1/45 (2%)
Frame = +3
Query: 180 TCVVCFKNVLYYSIGECDHPVCFECSTRMRVLCLQN-ECPICRKD 311
TC +C + C H C+ C +N +CP CR +
Sbjct: 42 TCPICLDRYKQPKLLPCQHTFCYPCLESCADTLHRNLKCPECRAE 86
>U80449-2|AAB37826.1| 112|Caenorhabditis elegans Hypothetical
protein R10A10.2 protein.
Length = 112
Score = 27.9 bits (59), Expect = 9.1
Identities = 12/34 (35%), Positives = 18/34 (52%)
Frame = +3
Query: 210 YYSIGECDHPVCFECSTRMRVLCLQNECPICRKD 311
Y G+C+H C T+ + N CP+C+KD
Sbjct: 73 YVVWGDCNHSFHHCCMTQW--IRQNNRCPLCQKD 104
>U61955-6|AAC24408.2| 505|Caenorhabditis elegans Hypothetical
protein M03D4.4a protein.
Length = 505
Score = 27.9 bits (59), Expect = 9.1
Identities = 12/23 (52%), Positives = 13/23 (56%)
Frame = +1
Query: 670 LCEFCXKRFMDPDELYRHLRKEH 738
LC C F DEL RH R+EH
Sbjct: 6 LCRDCSGAFHSLDELQRHEREEH 28
>U58754-5|AAB00672.2| 330|Caenorhabditis elegans Serpentine
receptor, class sx protein14 protein.
Length = 330
Score = 27.9 bits (59), Expect = 9.1
Identities = 18/61 (29%), Positives = 28/61 (45%), Gaps = 4/61 (6%)
Frame = -1
Query: 251 LETYGMVTLAN*VVQNV----LETNYASILVRLSLRHDCCIVYLGFSKSVSVTECFIKFR 84
LE +G+ N VV + L T Y IL L+ H C++Y S SV + ++
Sbjct: 21 LEVFGLFGNINLVVLTIRKKSLRTKYGCILGILATLHTLCLLYELVDMSFSVAASYYYYK 80
Query: 83 V 81
+
Sbjct: 81 I 81
>U39997-9|AAA81101.2| 468|Caenorhabditis elegans Hypothetical
protein F56D1.1 protein.
Length = 468
Score = 27.9 bits (59), Expect = 9.1
Identities = 11/27 (40%), Positives = 16/27 (59%)
Frame = +1
Query: 649 TSHRGHPLCEFCXKRFMDPDELYRHLR 729
T HP C FC K+F P++L H++
Sbjct: 74 TKDEFHP-CPFCEKKFRYPNKLREHIK 99
>AY032860-1|AAK52089.1| 1205|Caenorhabditis elegans EEA1 protein.
Length = 1205
Score = 27.9 bits (59), Expect = 9.1
Identities = 14/32 (43%), Positives = 14/32 (43%)
Frame = +1
Query: 643 NDTSHRGHPLCEFCXKRFMDPDELYRHLRKEH 738
ND G LC C PDEL H KEH
Sbjct: 41 NDQEIEGF-LCPMCMVELGGPDELTVHFEKEH 71
>AC017117-2|AAF16617.1| 295|Caenorhabditis elegans Hypothetical
protein F43C11.7 protein.
Length = 295
Score = 27.9 bits (59), Expect = 9.1
Identities = 11/27 (40%), Positives = 16/27 (59%)
Frame = +3
Query: 228 CDHPVCFECSTRMRVLCLQNECPICRK 308
C H +C CS+++ V + CP CRK
Sbjct: 27 CGHSICKACSSKL-VSNFKILCPFCRK 52
>AC006608-5|ABC71834.1| 311|Caenorhabditis elegans Hypothetical
protein C15F1.5b protein.
Length = 311
Score = 27.9 bits (59), Expect = 9.1
Identities = 12/27 (44%), Positives = 15/27 (55%), Gaps = 1/27 (3%)
Frame = +3
Query: 225 ECDHPVCFECSTRMRVLCLQN-ECPIC 302
ECDH VC +C M C +N + P C
Sbjct: 129 ECDHDVCIKCIGSMLDECEKNGKSPAC 155
>AC006608-4|AAF39758.2| 381|Caenorhabditis elegans Hypothetical
protein C15F1.5a protein.
Length = 381
Score = 27.9 bits (59), Expect = 9.1
Identities = 12/27 (44%), Positives = 15/27 (55%), Gaps = 1/27 (3%)
Frame = +3
Query: 225 ECDHPVCFECSTRMRVLCLQN-ECPIC 302
ECDH VC +C M C +N + P C
Sbjct: 199 ECDHDVCIKCIGSMLDECEKNGKSPAC 225
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,994,456
Number of Sequences: 27780
Number of extensions: 421027
Number of successful extensions: 1601
Number of sequences better than 10.0: 55
Number of HSP's better than 10.0 without gapping: 1453
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1599
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1998381620
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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