Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP11_FL5_P19
(834 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
X53583-1|CAA37652.1| 576|Drosophila melanogaster alpha-2-subuni... 44 3e-04
X52274-1|CAA36517.1| 576|Drosophila melanogaster nicotinic acet... 44 3e-04
X07194-1|CAA30172.1| 567|Drosophila melanogaster mature acetylc... 44 3e-04
AY058446-1|AAL13675.1| 576|Drosophila melanogaster GH22843p pro... 44 3e-04
AE014297-3556|AAF56303.1| 576|Drosophila melanogaster CG6844-PB... 44 3e-04
AE014297-3555|AAF56302.2| 576|Drosophila melanogaster CG6844-PA... 44 3e-04
AE014297-3553|AAF56301.2| 567|Drosophila melanogaster CG5610-PA... 43 5e-04
Y15594-1|CAA75689.1| 776|Drosophila melanogaster nicotinic acet... 42 0.001
Y15593-1|CAA75688.1| 795|Drosophila melanogaster nicotinic acet... 42 0.001
AE014298-1164|AAF46361.2| 783|Drosophila melanogaster CG2302-PA... 42 0.001
X78349-1|CAA55144.1| 686|Drosophila melanogaster Grd protein. 41 0.002
AE014296-2969|AAF49298.2| 686|Drosophila melanogaster CG7446-PA... 41 0.002
AJ272159-1|CAB77445.1| 568|Drosophila melanogaster nicotinic ac... 40 0.003
X55676-1|CAA39211.1| 500|Drosophila melanogaster second beta su... 39 0.007
AY089498-1|AAL90236.1| 238|Drosophila melanogaster GH09870p pro... 39 0.007
AE014297-3558|AAN13998.1| 304|Drosophila melanogaster CG6798-PB... 39 0.007
AE014297-3557|AAF56304.1| 519|Drosophila melanogaster CG6798-PA... 39 0.007
AF321449-1|AAM13396.1| 523|Drosophila melanogaster nicotinic ac... 39 0.010
AF321445-1|AAM13392.1| 494|Drosophila melanogaster nicotinic ac... 39 0.010
AE014134-1705|AAS64671.1| 523|Drosophila melanogaster CG4128-PE... 39 0.010
AE014134-1704|AAF52817.3| 494|Drosophila melanogaster CG4128-PA... 39 0.010
EF458626-1|ABO26063.1| 560|Drosophila melanogaster nicotinic ac... 38 0.017
AY036614-1|AAK67257.1| 219|Drosophila melanogaster nicotinic ac... 38 0.017
AJ554210-1|CAD86936.1| 542|Drosophila melanogaster nicotinic ac... 38 0.017
AE014298-2837|AAS65410.1| 219|Drosophila melanogaster CG32538-P... 38 0.017
AE014298-2836|AAS65409.1| 560|Drosophila melanogaster CG32538-P... 38 0.017
AE014298-2835|AAF48950.3| 541|Drosophila melanogaster CG32538-P... 38 0.017
X04016-3|CAA27641.1| 521|Drosophila melanogaster nicotinic AChR... 38 0.022
X07956-1|CAA30778.1| 521|Drosophila melanogaster protein ( D. m... 37 0.030
M20316-1|AAA28311.1| 521|Drosophila melanogaster protein ( D.me... 37 0.030
AE014296-848|AAF47900.1| 521|Drosophila melanogaster CG11348-PA... 37 0.030
BT011147-1|AAR82815.1| 508|Drosophila melanogaster GH15518p pro... 36 0.068
AY060225-1|AAL25264.1| 121|Drosophila melanogaster GH01410p pro... 36 0.068
AY036613-1|AAK67256.1| 482|Drosophila melanogaster nicotinic ac... 36 0.068
AJ554209-1|CAD86935.1| 494|Drosophila melanogaster nicotinic ac... 36 0.068
AF321447-1|AAM13394.1| 494|Drosophila melanogaster nicotinic ac... 36 0.068
AF321446-1|AAM13393.1| 494|Drosophila melanogaster nicotinic ac... 36 0.068
AF272778-1|AAM13390.1| 807|Drosophila melanogaster nicotinic ac... 36 0.068
AE014134-2462|AAF53374.3| 570|Drosophila melanogaster CG32975-P... 36 0.068
AE014134-2461|AAS64703.1| 808|Drosophila melanogaster CG32975-P... 36 0.068
AE014134-2460|AAS64702.1| 786|Drosophila melanogaster CG32975-P... 36 0.068
AE014134-1707|ABC65885.1| 121|Drosophila melanogaster CG4128-PF... 36 0.068
AE014134-1703|AAS64670.1| 494|Drosophila melanogaster CG4128-PB... 36 0.068
AE014134-1702|AAN10709.2| 494|Drosophila melanogaster CG4128-PC... 36 0.068
AF321448-1|AAM13395.1| 509|Drosophila melanogaster nicotinic ac... 36 0.090
AE014134-1706|AAS64672.1| 509|Drosophila melanogaster CG4128-PD... 36 0.090
BT022901-1|AAY55317.1| 612|Drosophila melanogaster IP12579p pro... 32 0.84
AF045471-1|AAF18569.1| 388|Drosophila melanogaster DNtR protein. 32 0.84
AE014298-2285|AAF48539.3| 572|Drosophila melanogaster CG8916-PA... 32 0.84
AE013599-3342|AAF46805.1| 585|Drosophila melanogaster CG6698-PA... 32 0.84
AY069859-1|AAL40004.1| 313|Drosophila melanogaster SD10415p pro... 29 7.8
AE013599-450|AAF59230.1| 1379|Drosophila melanogaster CG2105-PA,... 29 7.8
AE013599-449|AAS64900.1| 1397|Drosophila melanogaster CG2105-PB,... 29 7.8
>X53583-1|CAA37652.1| 576|Drosophila melanogaster alpha-2-subunit
nicotinic acetylcholinereceptor precursor protein.
Length = 576
Score = 44.0 bits (99), Expect = 3e-04
Identities = 30/90 (33%), Positives = 45/90 (50%), Gaps = 8/90 (8%)
Frame = +3
Query: 141 MIDSLLATYDRESPPDSK----IVVNLTLHLRHA---NIRESESTVRILADLQMNWIDKR 299
+ D LL+ Y+R P S ++V L L L N+++ T + L+ W D +
Sbjct: 48 LYDDLLSNYNRLIRPVSNNTDTVLVKLGLRLSQLIDLNLKDQILTTNVW--LEHEWQDHK 105
Query: 300 LSWNAGEWGCSTWL-VSSERLWRPDVVLLN 386
W+ E+G T L V SE +W PD+VL N
Sbjct: 106 FKWDPSEYGGVTELYVPSEHIWLPDIVLYN 135
>X52274-1|CAA36517.1| 576|Drosophila melanogaster nicotinic
acetylcholine receptoralpha subunit protein.
Length = 576
Score = 44.0 bits (99), Expect = 3e-04
Identities = 30/90 (33%), Positives = 45/90 (50%), Gaps = 8/90 (8%)
Frame = +3
Query: 141 MIDSLLATYDRESPPDSK----IVVNLTLHLRHA---NIRESESTVRILADLQMNWIDKR 299
+ D LL+ Y+R P S ++V L L L N+++ T + L+ W D +
Sbjct: 48 LYDDLLSNYNRLIRPVSNNTDTVLVKLGLRLSQLIDLNLKDQILTTNVW--LEHEWQDHK 105
Query: 300 LSWNAGEWGCSTWL-VSSERLWRPDVVLLN 386
W+ E+G T L V SE +W PD+VL N
Sbjct: 106 FKWDPSEYGGVTELYVPSEHIWLPDIVLYN 135
>X07194-1|CAA30172.1| 567|Drosophila melanogaster mature
acetylcholine receptoralpha-like subunit protein.
Length = 567
Score = 44.0 bits (99), Expect = 3e-04
Identities = 27/90 (30%), Positives = 43/90 (47%), Gaps = 8/90 (8%)
Frame = +3
Query: 141 MIDSLLATYDRESPP----DSKIVVNLTLHLRH---ANIRESESTVRILADLQMNWIDKR 299
+ D LL+ Y+R P ++ V + L L N++ T + ++ W D +
Sbjct: 28 LYDDLLSNYNRLIRPVGNNSDRLTVKMGLRLSQLIDVNLKNQIMTTNVW--VEQEWNDYK 85
Query: 300 LSWNAGEWG-CSTWLVSSERLWRPDVVLLN 386
L WN ++G T V SE +W PD+VL N
Sbjct: 86 LKWNPDDYGGVDTLHVPSEHIWHPDIVLYN 115
>AY058446-1|AAL13675.1| 576|Drosophila melanogaster GH22843p
protein.
Length = 576
Score = 44.0 bits (99), Expect = 3e-04
Identities = 30/90 (33%), Positives = 45/90 (50%), Gaps = 8/90 (8%)
Frame = +3
Query: 141 MIDSLLATYDRESPPDSK----IVVNLTLHLRHA---NIRESESTVRILADLQMNWIDKR 299
+ D LL+ Y+R P S ++V L L L N+++ T + L+ W D +
Sbjct: 48 LYDDLLSNYNRLIRPVSNNTDTVLVKLGLRLSQLIDLNLKDQILTTNVW--LEHEWQDHK 105
Query: 300 LSWNAGEWGCSTWL-VSSERLWRPDVVLLN 386
W+ E+G T L V SE +W PD+VL N
Sbjct: 106 FKWDPSEYGGVTELYVPSEHIWLPDIVLYN 135
>AE014297-3556|AAF56303.1| 576|Drosophila melanogaster CG6844-PB,
isoform B protein.
Length = 576
Score = 44.0 bits (99), Expect = 3e-04
Identities = 30/90 (33%), Positives = 45/90 (50%), Gaps = 8/90 (8%)
Frame = +3
Query: 141 MIDSLLATYDRESPPDSK----IVVNLTLHLRHA---NIRESESTVRILADLQMNWIDKR 299
+ D LL+ Y+R P S ++V L L L N+++ T + L+ W D +
Sbjct: 48 LYDDLLSNYNRLIRPVSNNTDTVLVKLGLRLSQLIDLNLKDQILTTNVW--LEHEWQDHK 105
Query: 300 LSWNAGEWGCSTWL-VSSERLWRPDVVLLN 386
W+ E+G T L V SE +W PD+VL N
Sbjct: 106 FKWDPSEYGGVTELYVPSEHIWLPDIVLYN 135
>AE014297-3555|AAF56302.2| 576|Drosophila melanogaster CG6844-PA,
isoform A protein.
Length = 576
Score = 44.0 bits (99), Expect = 3e-04
Identities = 30/90 (33%), Positives = 45/90 (50%), Gaps = 8/90 (8%)
Frame = +3
Query: 141 MIDSLLATYDRESPPDSK----IVVNLTLHLRHA---NIRESESTVRILADLQMNWIDKR 299
+ D LL+ Y+R P S ++V L L L N+++ T + L+ W D +
Sbjct: 48 LYDDLLSNYNRLIRPVSNNTDTVLVKLGLRLSQLIDLNLKDQILTTNVW--LEHEWQDHK 105
Query: 300 LSWNAGEWGCSTWL-VSSERLWRPDVVLLN 386
W+ E+G T L V SE +W PD+VL N
Sbjct: 106 FKWDPSEYGGVTELYVPSEHIWLPDIVLYN 135
>AE014297-3553|AAF56301.2| 567|Drosophila melanogaster CG5610-PA
protein.
Length = 567
Score = 43.2 bits (97), Expect = 5e-04
Identities = 27/90 (30%), Positives = 43/90 (47%), Gaps = 8/90 (8%)
Frame = +3
Query: 141 MIDSLLATYDRESPP----DSKIVVNLTLHLRH---ANIRESESTVRILADLQMNWIDKR 299
+ D LL+ Y+R P ++ V + L L N++ T + ++ W D +
Sbjct: 28 LYDDLLSNYNRLIRPVGNNSDRLTVKMGLRLSQLIDVNLKNQIMTTNVW--VEQEWNDYK 85
Query: 300 LSWNAGEWG-CSTWLVSSERLWRPDVVLLN 386
L WN ++G T V SE +W PD+VL N
Sbjct: 86 LKWNPDDYGGVDTLHVPSEHIWLPDIVLYN 115
>Y15594-1|CAA75689.1| 776|Drosophila melanogaster nicotinic
acetylcholine receptoralpha 3 subunit protein.
Length = 776
Score = 41.9 bits (94), Expect = 0.001
Identities = 25/90 (27%), Positives = 44/90 (48%), Gaps = 8/90 (8%)
Frame = +3
Query: 141 MIDSLLATYDRESPPDSKIVVNLTLHLR-------HANIRESESTVRILADLQMNWIDKR 299
+ D LL+ Y++ P + LT+ ++ N++ T + ++ +W D +
Sbjct: 10 LYDDLLSNYNKLVRPVVNVTDALTVRIKLKLSQLIDVNLKNQIMTTNLW--VEQSWYDYK 67
Query: 300 LSWNAGEWGCSTWL-VSSERLWRPDVVLLN 386
L W E+G L V S+ +WRPD+VL N
Sbjct: 68 LKWEPKEYGGVEMLHVPSDHIWRPDIVLYN 97
>Y15593-1|CAA75688.1| 795|Drosophila melanogaster nicotinic
acetylcholine receptoralpha 3 subunit protein.
Length = 795
Score = 41.9 bits (94), Expect = 0.001
Identities = 25/90 (27%), Positives = 44/90 (48%), Gaps = 8/90 (8%)
Frame = +3
Query: 141 MIDSLLATYDRESPPDSKIVVNLTLHLR-------HANIRESESTVRILADLQMNWIDKR 299
+ D LL+ Y++ P + LT+ ++ N++ T + ++ +W D +
Sbjct: 29 LYDDLLSNYNKLVRPVVNVTDALTVRIKLKLSQLIDVNLKNQIMTTNLW--VEQSWYDYK 86
Query: 300 LSWNAGEWGCSTWL-VSSERLWRPDVVLLN 386
L W E+G L V S+ +WRPD+VL N
Sbjct: 87 LKWEPKEYGGVEMLHVPSDHIWRPDIVLYN 116
>AE014298-1164|AAF46361.2| 783|Drosophila melanogaster CG2302-PA
protein.
Length = 783
Score = 41.9 bits (94), Expect = 0.001
Identities = 25/90 (27%), Positives = 44/90 (48%), Gaps = 8/90 (8%)
Frame = +3
Query: 141 MIDSLLATYDRESPPDSKIVVNLTLHLR-------HANIRESESTVRILADLQMNWIDKR 299
+ D LL+ Y++ P + LT+ ++ N++ T + ++ +W D +
Sbjct: 29 LYDDLLSNYNKLVRPVVNVTDALTVRIKLKLSQLIDVNLKNQIMTTNLW--VEQSWYDYK 86
Query: 300 LSWNAGEWGCSTWL-VSSERLWRPDVVLLN 386
L W E+G L V S+ +WRPD+VL N
Sbjct: 87 LKWEPKEYGGVEMLHVPSDHIWRPDIVLYN 116
>X78349-1|CAA55144.1| 686|Drosophila melanogaster Grd protein.
Length = 686
Score = 40.7 bits (91), Expect = 0.002
Identities = 23/96 (23%), Positives = 45/96 (46%), Gaps = 4/96 (4%)
Frame = +3
Query: 111 ECENATSLSLMIDSLLATYDRESPPD---SKIVVNLTLHLRHAN-IRESESTVRILADLQ 278
+ N ++S ++D+LL YD PD + + + +R I E + T + +
Sbjct: 102 QSNNHANISELLDNLLRGYDNSIRPDFGGPPATIEVDIMVRSMGPISEVDMTYSMDCYFR 161
Query: 279 MNWIDKRLSWNAGEWGCSTWLVSSERLWRPDVVLLN 386
+W+DKRL++ + + + R+W+PD N
Sbjct: 162 QSWVDKRLAFEGAQDTLALSVSMLARIWKPDTYFYN 197
>AE014296-2969|AAF49298.2| 686|Drosophila melanogaster CG7446-PA
protein.
Length = 686
Score = 40.7 bits (91), Expect = 0.002
Identities = 23/96 (23%), Positives = 45/96 (46%), Gaps = 4/96 (4%)
Frame = +3
Query: 111 ECENATSLSLMIDSLLATYDRESPPD---SKIVVNLTLHLRHAN-IRESESTVRILADLQ 278
+ N ++S ++D+LL YD PD + + + +R I E + T + +
Sbjct: 102 QSNNHANISELLDNLLRGYDNSIRPDFGGPPATIEVDIMVRSMGPISEVDMTYSMDCYFR 161
Query: 279 MNWIDKRLSWNAGEWGCSTWLVSSERLWRPDVVLLN 386
+W+DKRL++ + + + R+W+PD N
Sbjct: 162 QSWVDKRLAFEGAQDTLALSVSMLARIWKPDTYFYN 197
>AJ272159-1|CAB77445.1| 568|Drosophila melanogaster nicotinic
acetylcholine receptorDalpha 4 subunit protein.
Length = 568
Score = 40.3 bits (90), Expect = 0.003
Identities = 24/88 (27%), Positives = 47/88 (53%), Gaps = 6/88 (6%)
Frame = +3
Query: 141 MIDSLLATYDRESPP--DSKIVVNLTLHLRHANIRESESTVRILAD---LQMNWIDKRLS 305
+ D LL+ Y++ P ++ V+ + + L+ + + + +I+ ++ +W D +L
Sbjct: 44 LYDDLLSNYNKLVRPVVNTTDVLKVCIKLKLSQLIDVNLKNQIMTTNLWVEQSWYDYKLR 103
Query: 306 WNAGEWGCSTWL-VSSERLWRPDVVLLN 386
W E+G L V S+ +WRPD+VL N
Sbjct: 104 WEPKEYGGVHMLHVPSDHIWRPDIVLYN 131
>X55676-1|CAA39211.1| 500|Drosophila melanogaster second beta
subunit of nicotinicacetylcholine receptor protein.
Length = 500
Score = 39.1 bits (87), Expect = 0.007
Identities = 27/88 (30%), Positives = 43/88 (48%), Gaps = 6/88 (6%)
Frame = +3
Query: 141 MIDSLLATYDRESPPDSKIVVNLT--LHLRHANIRESESTVRILAD---LQMNWIDKRLS 305
+ D LL+ Y+R P LT L L+ + + E +++ ++ W D +L
Sbjct: 14 LYDDLLSNYNRLIRPVVNNTETLTVWLGLKLSQLIEVNLKNQVMTTNLWVKQRWFDYKLR 73
Query: 306 WNAGEWGCSTWL-VSSERLWRPDVVLLN 386
W+ E+G L V SE +W PD+VL N
Sbjct: 74 WDPEEYGGVEQLYVPSEHIWVPDIVLYN 101
>AY089498-1|AAL90236.1| 238|Drosophila melanogaster GH09870p
protein.
Length = 238
Score = 39.1 bits (87), Expect = 0.007
Identities = 27/88 (30%), Positives = 43/88 (48%), Gaps = 6/88 (6%)
Frame = +3
Query: 141 MIDSLLATYDRESPPDSKIVVNLT--LHLRHANIRESESTVRILAD---LQMNWIDKRLS 305
+ D LL+ Y+R P LT L L+ + + E +++ ++ W D +L
Sbjct: 33 LYDDLLSNYNRLIRPVVNNTETLTVWLGLKLSQLIEVNLKNQVMTTNLWVKQRWFDYKLR 92
Query: 306 WNAGEWGCSTWL-VSSERLWRPDVVLLN 386
W+ E+G L V SE +W PD+VL N
Sbjct: 93 WDPEEYGGVEQLYVPSEHIWVPDIVLYN 120
>AE014297-3558|AAN13998.1| 304|Drosophila melanogaster CG6798-PB,
isoform B protein.
Length = 304
Score = 39.1 bits (87), Expect = 0.007
Identities = 27/88 (30%), Positives = 43/88 (48%), Gaps = 6/88 (6%)
Frame = +3
Query: 141 MIDSLLATYDRESPPDSKIVVNLT--LHLRHANIRESESTVRILAD---LQMNWIDKRLS 305
+ D LL+ Y+R P LT L L+ + + E +++ ++ W D +L
Sbjct: 33 LYDDLLSNYNRLIRPVVNNTETLTVWLGLKLSQLIEVNLKNQVMTTNLWVKQRWFDYKLR 92
Query: 306 WNAGEWGCSTWL-VSSERLWRPDVVLLN 386
W+ E+G L V SE +W PD+VL N
Sbjct: 93 WDPEEYGGVEQLYVPSEHIWVPDIVLYN 120
>AE014297-3557|AAF56304.1| 519|Drosophila melanogaster CG6798-PA,
isoform A protein.
Length = 519
Score = 39.1 bits (87), Expect = 0.007
Identities = 27/88 (30%), Positives = 43/88 (48%), Gaps = 6/88 (6%)
Frame = +3
Query: 141 MIDSLLATYDRESPPDSKIVVNLT--LHLRHANIRESESTVRILAD---LQMNWIDKRLS 305
+ D LL+ Y+R P LT L L+ + + E +++ ++ W D +L
Sbjct: 33 LYDDLLSNYNRLIRPVVNNTETLTVWLGLKLSQLIEVNLKNQVMTTNLWVKQRWFDYKLR 92
Query: 306 WNAGEWGCSTWL-VSSERLWRPDVVLLN 386
W+ E+G L V SE +W PD+VL N
Sbjct: 93 WDPEEYGGVEQLYVPSEHIWVPDIVLYN 120
>AF321449-1|AAM13396.1| 523|Drosophila melanogaster nicotinic
acetylcholine receptorDalpha6 subunit variant type V
protein.
Length = 523
Score = 38.7 bits (86), Expect = 0.010
Identities = 24/88 (27%), Positives = 42/88 (47%), Gaps = 6/88 (6%)
Frame = +3
Query: 141 MIDSLLATYDRESPP----DSKIVVNLTLHLRHA-NIRESESTVRILADLQMNWIDKRLS 305
+++ LL+TY+ P + V L L+ ++ E + A L + W D L
Sbjct: 33 LLNHLLSTYNTLERPVANESEPLEVKFGLTLQQIIDVDEKNQILTTNAWLNLEWNDYNLR 92
Query: 306 WNAGEW-GCSTWLVSSERLWRPDVVLLN 386
WN E+ G ++ +LW+PDV++ N
Sbjct: 93 WNETEYGGVKDLRITPNKLWKPDVLMYN 120
>AF321445-1|AAM13392.1| 494|Drosophila melanogaster nicotinic
acetylcholine receptorDalpha6 subunit variant type I
protein.
Length = 494
Score = 38.7 bits (86), Expect = 0.010
Identities = 24/88 (27%), Positives = 42/88 (47%), Gaps = 6/88 (6%)
Frame = +3
Query: 141 MIDSLLATYDRESPP----DSKIVVNLTLHLRHA-NIRESESTVRILADLQMNWIDKRLS 305
+++ LL+TY+ P + V L L+ ++ E + A L + W D L
Sbjct: 33 LLNHLLSTYNTLERPVANESEPLEVKFGLTLQQIIDVDEKNQILTTNAWLNLEWNDYNLR 92
Query: 306 WNAGEW-GCSTWLVSSERLWRPDVVLLN 386
WN E+ G ++ +LW+PDV++ N
Sbjct: 93 WNETEYGGVKDLRITPNKLWKPDVLMYN 120
>AE014134-1705|AAS64671.1| 523|Drosophila melanogaster CG4128-PE,
isoform E protein.
Length = 523
Score = 38.7 bits (86), Expect = 0.010
Identities = 24/88 (27%), Positives = 42/88 (47%), Gaps = 6/88 (6%)
Frame = +3
Query: 141 MIDSLLATYDRESPP----DSKIVVNLTLHLRHA-NIRESESTVRILADLQMNWIDKRLS 305
+++ LL+TY+ P + V L L+ ++ E + A L + W D L
Sbjct: 33 LLNHLLSTYNTLERPVANESEPLEVKFGLTLQQIIDVDEKNQILTTNAWLNLEWNDYNLR 92
Query: 306 WNAGEW-GCSTWLVSSERLWRPDVVLLN 386
WN E+ G ++ +LW+PDV++ N
Sbjct: 93 WNETEYGGVKDLRITPNKLWKPDVLMYN 120
>AE014134-1704|AAF52817.3| 494|Drosophila melanogaster CG4128-PA,
isoform A protein.
Length = 494
Score = 38.7 bits (86), Expect = 0.010
Identities = 24/88 (27%), Positives = 42/88 (47%), Gaps = 6/88 (6%)
Frame = +3
Query: 141 MIDSLLATYDRESPP----DSKIVVNLTLHLRHA-NIRESESTVRILADLQMNWIDKRLS 305
+++ LL+TY+ P + V L L+ ++ E + A L + W D L
Sbjct: 33 LLNHLLSTYNTLERPVANESEPLEVKFGLTLQQIIDVDEKNQILTTNAWLNLEWNDYNLR 92
Query: 306 WNAGEW-GCSTWLVSSERLWRPDVVLLN 386
WN E+ G ++ +LW+PDV++ N
Sbjct: 93 WNETEYGGVKDLRITPNKLWKPDVLMYN 120
>EF458626-1|ABO26063.1| 560|Drosophila melanogaster nicotinic
acetylcholine receptorDalpha7 protein.
Length = 560
Score = 37.9 bits (84), Expect = 0.017
Identities = 16/39 (41%), Positives = 24/39 (61%), Gaps = 1/39 (2%)
Frame = +3
Query: 273 LQMNWIDKRLSWNAGEWGCSTWL-VSSERLWRPDVVLLN 386
L++ W D L WN+ E+G L + RLW+PDV++ N
Sbjct: 113 LKLEWNDMNLRWNSSEFGGVRDLRIPPHRLWKPDVLMYN 151
>AY036614-1|AAK67257.1| 219|Drosophila melanogaster nicotinic
acetylcholine receptorDalpha7 subunit protein.
Length = 219
Score = 37.9 bits (84), Expect = 0.017
Identities = 16/39 (41%), Positives = 24/39 (61%), Gaps = 1/39 (2%)
Frame = +3
Query: 273 LQMNWIDKRLSWNAGEWGCSTWL-VSSERLWRPDVVLLN 386
L++ W D L WN+ E+G L + RLW+PDV++ N
Sbjct: 113 LKLEWNDMNLRWNSSEFGGVRDLRIPPHRLWKPDVLMYN 151
>AJ554210-1|CAD86936.1| 542|Drosophila melanogaster nicotinic
acetylcholine receptorsubunit Dalpha7 protein.
Length = 542
Score = 37.9 bits (84), Expect = 0.017
Identities = 16/39 (41%), Positives = 24/39 (61%), Gaps = 1/39 (2%)
Frame = +3
Query: 273 LQMNWIDKRLSWNAGEWGCSTWL-VSSERLWRPDVVLLN 386
L++ W D L WN+ E+G L + RLW+PDV++ N
Sbjct: 91 LKLEWNDMNLRWNSSEFGGVRDLRIPPHRLWKPDVLMYN 129
>AE014298-2837|AAS65410.1| 219|Drosophila melanogaster CG32538-PC,
isoform C protein.
Length = 219
Score = 37.9 bits (84), Expect = 0.017
Identities = 16/39 (41%), Positives = 24/39 (61%), Gaps = 1/39 (2%)
Frame = +3
Query: 273 LQMNWIDKRLSWNAGEWGCSTWL-VSSERLWRPDVVLLN 386
L++ W D L WN+ E+G L + RLW+PDV++ N
Sbjct: 113 LKLEWNDMNLRWNSSEFGGVRDLRIPPHRLWKPDVLMYN 151
>AE014298-2836|AAS65409.1| 560|Drosophila melanogaster CG32538-PA,
isoform A protein.
Length = 560
Score = 37.9 bits (84), Expect = 0.017
Identities = 16/39 (41%), Positives = 24/39 (61%), Gaps = 1/39 (2%)
Frame = +3
Query: 273 LQMNWIDKRLSWNAGEWGCSTWL-VSSERLWRPDVVLLN 386
L++ W D L WN+ E+G L + RLW+PDV++ N
Sbjct: 113 LKLEWNDMNLRWNSSEFGGVRDLRIPPHRLWKPDVLMYN 151
>AE014298-2835|AAF48950.3| 541|Drosophila melanogaster CG32538-PB,
isoform B protein.
Length = 541
Score = 37.9 bits (84), Expect = 0.017
Identities = 16/39 (41%), Positives = 24/39 (61%), Gaps = 1/39 (2%)
Frame = +3
Query: 273 LQMNWIDKRLSWNAGEWGCSTWL-VSSERLWRPDVVLLN 386
L++ W D L WN+ E+G L + RLW+PDV++ N
Sbjct: 94 LKLEWNDMNLRWNSSEFGGVRDLRIPPHRLWKPDVLMYN 132
>X04016-3|CAA27641.1| 521|Drosophila melanogaster nicotinic AChR
protein.
Length = 521
Score = 37.5 bits (83), Expect = 0.022
Identities = 14/53 (26%), Positives = 29/53 (54%), Gaps = 1/53 (1%)
Frame = +3
Query: 231 NIRESESTVRILADLQMNWIDKRLSWNAGEW-GCSTWLVSSERLWRPDVVLLN 386
N+ E ++ L++ W D +L W+ ++ G + +++W+PD+VL N
Sbjct: 66 NVNEKNQVMKSNVWLRLVWYDYQLQWDEADYGGIGVLRLPPDKVWKPDIVLFN 118
>X07956-1|CAA30778.1| 521|Drosophila melanogaster protein ( D.
melanogaster ardgene exons 1-2 (fragment Xba-IN2 of
gARD5) for nicotinicacetylcholine receptor. ).
Length = 521
Score = 37.1 bits (82), Expect = 0.030
Identities = 14/53 (26%), Positives = 29/53 (54%), Gaps = 1/53 (1%)
Frame = +3
Query: 231 NIRESESTVRILADLQMNWIDKRLSWNAGEW-GCSTWLVSSERLWRPDVVLLN 386
N+ E ++ L++ W D +L W+ ++ G + +++W+PD+VL N
Sbjct: 66 NVNEKNQIMKSNVWLRLVWYDYQLQWDEADYGGIGVLRLPPDKVWKPDIVLFN 118
>M20316-1|AAA28311.1| 521|Drosophila melanogaster protein (
D.melanogaster acetylcholinereceptor-related protein
mRNA, complete cds. ).
Length = 521
Score = 37.1 bits (82), Expect = 0.030
Identities = 14/53 (26%), Positives = 29/53 (54%), Gaps = 1/53 (1%)
Frame = +3
Query: 231 NIRESESTVRILADLQMNWIDKRLSWNAGEW-GCSTWLVSSERLWRPDVVLLN 386
N+ E ++ L++ W D +L W+ ++ G + +++W+PD+VL N
Sbjct: 66 NVNEKNQIMKSNVWLRLVWYDYQLQWDEADYGGIGVLRLPPDKVWKPDIVLFN 118
>AE014296-848|AAF47900.1| 521|Drosophila melanogaster CG11348-PA,
isoform A protein.
Length = 521
Score = 37.1 bits (82), Expect = 0.030
Identities = 14/53 (26%), Positives = 29/53 (54%), Gaps = 1/53 (1%)
Frame = +3
Query: 231 NIRESESTVRILADLQMNWIDKRLSWNAGEW-GCSTWLVSSERLWRPDVVLLN 386
N+ E ++ L++ W D +L W+ ++ G + +++W+PD+VL N
Sbjct: 66 NVNEKNQIMKSNVWLRLVWYDYQLQWDEADYGGIGVLRLPPDKVWKPDIVLFN 118
>BT011147-1|AAR82815.1| 508|Drosophila melanogaster GH15518p
protein.
Length = 508
Score = 35.9 bits (79), Expect = 0.068
Identities = 23/88 (26%), Positives = 41/88 (46%), Gaps = 6/88 (6%)
Frame = +3
Query: 141 MIDSLLATYDRESPP----DSKIVVNLTLHLRHA-NIRESESTVRILADLQMNWIDKRLS 305
+++ LL+TY+ P + V L L+ ++ E + L + W D L
Sbjct: 47 LLNHLLSTYNTLERPVANESEPLEVKFGLTLQQIIDVDEKNQLLITNLWLSLEWNDYNLR 106
Query: 306 WNAGEW-GCSTWLVSSERLWRPDVVLLN 386
WN E+ G ++ +LW+PDV++ N
Sbjct: 107 WNETEYGGVKDLRITPNKLWKPDVLMYN 134
>AY060225-1|AAL25264.1| 121|Drosophila melanogaster GH01410p
protein.
Length = 121
Score = 35.9 bits (79), Expect = 0.068
Identities = 23/88 (26%), Positives = 41/88 (46%), Gaps = 6/88 (6%)
Frame = +3
Query: 141 MIDSLLATYDRESPP----DSKIVVNLTLHLRHA-NIRESESTVRILADLQMNWIDKRLS 305
+++ LL+TY+ P + V L L+ ++ E + L + W D L
Sbjct: 33 LLNHLLSTYNTLERPVANESEPLEVKFGLTLQQIIDVDEKNQLLITNLWLSLEWNDYNLR 92
Query: 306 WNAGEW-GCSTWLVSSERLWRPDVVLLN 386
WN E+ G ++ +LW+PDV++ N
Sbjct: 93 WNETEYGGVKDLRITPNKLWKPDVLMYN 120
>AY036613-1|AAK67256.1| 482|Drosophila melanogaster nicotinic
acetylcholine receptorDalpha5 subunit protein.
Length = 482
Score = 35.9 bits (79), Expect = 0.068
Identities = 13/39 (33%), Positives = 22/39 (56%), Gaps = 1/39 (2%)
Frame = +3
Query: 273 LQMNWIDKRLSWNAGEW-GCSTWLVSSERLWRPDVVLLN 386
L++ W D L WN ++ G + R+W+PDV++ N
Sbjct: 365 LKLEWNDMNLRWNTSDYGGVKDLRIPPHRIWKPDVLMYN 403
>AJ554209-1|CAD86935.1| 494|Drosophila melanogaster nicotinic
acetylcholine receptorsubunit Dalpha6 protein.
Length = 494
Score = 35.9 bits (79), Expect = 0.068
Identities = 23/88 (26%), Positives = 41/88 (46%), Gaps = 6/88 (6%)
Frame = +3
Query: 141 MIDSLLATYDRESPP----DSKIVVNLTLHLRHA-NIRESESTVRILADLQMNWIDKRLS 305
+++ LL+TY+ P + V L L+ ++ E + L + W D L
Sbjct: 33 LLNHLLSTYNTLERPVANESEPLEVKFGLTLQQIIDVDEKNQLLITNLWLSLEWNDYNLR 92
Query: 306 WNAGEW-GCSTWLVSSERLWRPDVVLLN 386
WN E+ G ++ +LW+PDV++ N
Sbjct: 93 WNETEYGGVKDLRITPNKLWKPDVLMYN 120
>AF321447-1|AAM13394.1| 494|Drosophila melanogaster nicotinic
acetylcholine receptorDalpha6 subunit variant type III
protein.
Length = 494
Score = 35.9 bits (79), Expect = 0.068
Identities = 23/88 (26%), Positives = 41/88 (46%), Gaps = 6/88 (6%)
Frame = +3
Query: 141 MIDSLLATYDRESPP----DSKIVVNLTLHLRHA-NIRESESTVRILADLQMNWIDKRLS 305
+++ LL+TY+ P + V L L+ ++ E + L + W D L
Sbjct: 33 LLNHLLSTYNTLERPVANESEPLEVKFGLTLQQIIDVDEKNQLLITNLWLSLEWNDYNLR 92
Query: 306 WNAGEW-GCSTWLVSSERLWRPDVVLLN 386
WN E+ G ++ +LW+PDV++ N
Sbjct: 93 WNETEYGGVKDLRITPNKLWKPDVLMYN 120
>AF321446-1|AAM13393.1| 494|Drosophila melanogaster nicotinic
acetylcholine receptorDalpha6 subunit variant type II
protein.
Length = 494
Score = 35.9 bits (79), Expect = 0.068
Identities = 23/88 (26%), Positives = 41/88 (46%), Gaps = 6/88 (6%)
Frame = +3
Query: 141 MIDSLLATYDRESPP----DSKIVVNLTLHLRHA-NIRESESTVRILADLQMNWIDKRLS 305
+++ LL+TY+ P + V L L+ ++ E + L + W D L
Sbjct: 33 LLNHLLSTYNTLERPVANESEPLEVKFGLTLQQIIDVDEKNQLLITNLWLSLEWNDYNLR 92
Query: 306 WNAGEW-GCSTWLVSSERLWRPDVVLLN 386
WN E+ G ++ +LW+PDV++ N
Sbjct: 93 WNETEYGGVKDLRITPNKLWKPDVLMYN 120
>AF272778-1|AAM13390.1| 807|Drosophila melanogaster nicotinic
acetylcholine receptorDalpha5 subunit protein.
Length = 807
Score = 35.9 bits (79), Expect = 0.068
Identities = 13/39 (33%), Positives = 22/39 (56%), Gaps = 1/39 (2%)
Frame = +3
Query: 273 LQMNWIDKRLSWNAGEW-GCSTWLVSSERLWRPDVVLLN 386
L++ W D L WN ++ G + R+W+PDV++ N
Sbjct: 364 LKLEWNDMNLRWNTSDYGGVKDLRIPPHRIWKPDVLMYN 402
>AE014134-2462|AAF53374.3| 570|Drosophila melanogaster CG32975-PA,
isoform A protein.
Length = 570
Score = 35.9 bits (79), Expect = 0.068
Identities = 13/39 (33%), Positives = 22/39 (56%), Gaps = 1/39 (2%)
Frame = +3
Query: 273 LQMNWIDKRLSWNAGEW-GCSTWLVSSERLWRPDVVLLN 386
L++ W D L WN ++ G + R+W+PDV++ N
Sbjct: 316 LKLEWNDMNLRWNTSDYGGVKDLRIPPHRIWKPDVLMYN 354
>AE014134-2461|AAS64703.1| 808|Drosophila melanogaster CG32975-PB,
isoform B protein.
Length = 808
Score = 35.9 bits (79), Expect = 0.068
Identities = 13/39 (33%), Positives = 22/39 (56%), Gaps = 1/39 (2%)
Frame = +3
Query: 273 LQMNWIDKRLSWNAGEW-GCSTWLVSSERLWRPDVVLLN 386
L++ W D L WN ++ G + R+W+PDV++ N
Sbjct: 365 LKLEWNDMNLRWNTSDYGGVKDLRIPPHRIWKPDVLMYN 403
>AE014134-2460|AAS64702.1| 786|Drosophila melanogaster CG32975-PC,
isoform C protein.
Length = 786
Score = 35.9 bits (79), Expect = 0.068
Identities = 13/39 (33%), Positives = 22/39 (56%), Gaps = 1/39 (2%)
Frame = +3
Query: 273 LQMNWIDKRLSWNAGEW-GCSTWLVSSERLWRPDVVLLN 386
L++ W D L WN ++ G + R+W+PDV++ N
Sbjct: 365 LKLEWNDMNLRWNTSDYGGVKDLRIPPHRIWKPDVLMYN 403
>AE014134-1707|ABC65885.1| 121|Drosophila melanogaster CG4128-PF,
isoform F protein.
Length = 121
Score = 35.9 bits (79), Expect = 0.068
Identities = 23/88 (26%), Positives = 41/88 (46%), Gaps = 6/88 (6%)
Frame = +3
Query: 141 MIDSLLATYDRESPP----DSKIVVNLTLHLRHA-NIRESESTVRILADLQMNWIDKRLS 305
+++ LL+TY+ P + V L L+ ++ E + L + W D L
Sbjct: 33 LLNHLLSTYNTLERPVANESEPLEVKFGLTLQQIIDVDEKNQLLITNLWLSLEWNDYNLR 92
Query: 306 WNAGEW-GCSTWLVSSERLWRPDVVLLN 386
WN E+ G ++ +LW+PDV++ N
Sbjct: 93 WNETEYGGVKDLRITPNKLWKPDVLMYN 120
>AE014134-1703|AAS64670.1| 494|Drosophila melanogaster CG4128-PB,
isoform B protein.
Length = 494
Score = 35.9 bits (79), Expect = 0.068
Identities = 23/88 (26%), Positives = 41/88 (46%), Gaps = 6/88 (6%)
Frame = +3
Query: 141 MIDSLLATYDRESPP----DSKIVVNLTLHLRHA-NIRESESTVRILADLQMNWIDKRLS 305
+++ LL+TY+ P + V L L+ ++ E + L + W D L
Sbjct: 33 LLNHLLSTYNTLERPVANESEPLEVKFGLTLQQIIDVDEKNQLLITNLWLSLEWNDYNLR 92
Query: 306 WNAGEW-GCSTWLVSSERLWRPDVVLLN 386
WN E+ G ++ +LW+PDV++ N
Sbjct: 93 WNETEYGGVKDLRITPNKLWKPDVLMYN 120
>AE014134-1702|AAN10709.2| 494|Drosophila melanogaster CG4128-PC,
isoform C protein.
Length = 494
Score = 35.9 bits (79), Expect = 0.068
Identities = 23/88 (26%), Positives = 41/88 (46%), Gaps = 6/88 (6%)
Frame = +3
Query: 141 MIDSLLATYDRESPP----DSKIVVNLTLHLRHA-NIRESESTVRILADLQMNWIDKRLS 305
+++ LL+TY+ P + V L L+ ++ E + L + W D L
Sbjct: 33 LLNHLLSTYNTLERPVANESEPLEVKFGLTLQQIIDVDEKNQLLITNLWLSLEWNDYNLR 92
Query: 306 WNAGEW-GCSTWLVSSERLWRPDVVLLN 386
WN E+ G ++ +LW+PDV++ N
Sbjct: 93 WNETEYGGVKDLRITPNKLWKPDVLMYN 120
>AF321448-1|AAM13395.1| 509|Drosophila melanogaster nicotinic
acetylcholine receptorDalpha6 subunit variant type IV
protein.
Length = 509
Score = 35.5 bits (78), Expect = 0.090
Identities = 14/39 (35%), Positives = 22/39 (56%), Gaps = 1/39 (2%)
Frame = +3
Query: 273 LQMNWIDKRLSWNAGEW-GCSTWLVSSERLWRPDVVLLN 386
L + W D L WN E+ G ++ +LW+PDV++ N
Sbjct: 97 LSLEWNDYNLRWNETEYGGVKDLRITPNKLWKPDVLMYN 135
>AE014134-1706|AAS64672.1| 509|Drosophila melanogaster CG4128-PD,
isoform D protein.
Length = 509
Score = 35.5 bits (78), Expect = 0.090
Identities = 14/39 (35%), Positives = 22/39 (56%), Gaps = 1/39 (2%)
Frame = +3
Query: 273 LQMNWIDKRLSWNAGEW-GCSTWLVSSERLWRPDVVLLN 386
L + W D L WN E+ G ++ +LW+PDV++ N
Sbjct: 97 LSLEWNDYNLRWNETEYGGVKDLRITPNKLWKPDVLMYN 135
>BT022901-1|AAY55317.1| 612|Drosophila melanogaster IP12579p
protein.
Length = 612
Score = 32.3 bits (70), Expect = 0.84
Identities = 21/91 (23%), Positives = 41/91 (45%), Gaps = 5/91 (5%)
Frame = +3
Query: 129 SLSLMIDSLLATYDRESPPDS----KIVVNLTLHLRHAN-IRESESTVRILADLQMNWID 293
++S+++++LL Y++ P VV + +R + E + + + W D
Sbjct: 107 NISMILENLLKRYEQSQLPTHGQGVPTVVQTNILIRSMGPVSELDMDYSMDCYFRQYWRD 166
Query: 294 KRLSWNAGEWGCSTWLVSSERLWRPDVVLLN 386
KRLS+ S + +++WRPD N
Sbjct: 167 KRLSFKGPIKSLSLSIKMLDKIWRPDTYFYN 197
>AF045471-1|AAF18569.1| 388|Drosophila melanogaster DNtR protein.
Length = 388
Score = 32.3 bits (70), Expect = 0.84
Identities = 18/88 (20%), Positives = 38/88 (43%), Gaps = 1/88 (1%)
Frame = +3
Query: 126 TSLSLMIDSLLATYDRESPPDSKIVVNLTLHLRHANIRESESTVRILADLQMNWIDKRLS 305
T ++ L + S P + ++ R ++ S ++ + M+W D RL
Sbjct: 17 TKTEKLLSHLNIQAENASMPANLSSISFHFQTRSLAYEQTSSLLQTRMHMMMHWRDSRLV 76
Query: 306 WNAGEWG-CSTWLVSSERLWRPDVVLLN 386
W ++G ++ R+W+P + +LN
Sbjct: 77 WKPEDFGSLESFEHPDLRIWKPHMNVLN 104
>AE014298-2285|AAF48539.3| 572|Drosophila melanogaster CG8916-PA
protein.
Length = 572
Score = 32.3 bits (70), Expect = 0.84
Identities = 21/91 (23%), Positives = 41/91 (45%), Gaps = 5/91 (5%)
Frame = +3
Query: 129 SLSLMIDSLLATYDRESPPDS----KIVVNLTLHLRHAN-IRESESTVRILADLQMNWID 293
++S+++++LL Y++ P VV + +R + E + + + W D
Sbjct: 93 NISMILENLLKRYEQSQLPTHGQGVPTVVQTNILIRSMGPVSELDMDYSMDCYFRQYWRD 152
Query: 294 KRLSWNAGEWGCSTWLVSSERLWRPDVVLLN 386
KRLS+ S + +++WRPD N
Sbjct: 153 KRLSFKGPIKSLSLSIKMLDKIWRPDTYFYN 183
>AE013599-3342|AAF46805.1| 585|Drosophila melanogaster CG6698-PA
protein.
Length = 585
Score = 32.3 bits (70), Expect = 0.84
Identities = 18/88 (20%), Positives = 38/88 (43%), Gaps = 1/88 (1%)
Frame = +3
Query: 126 TSLSLMIDSLLATYDRESPPDSKIVVNLTLHLRHANIRESESTVRILADLQMNWIDKRLS 305
T ++ L + S P + ++ R ++ S ++ + M+W D RL
Sbjct: 214 TKTEKLLSHLNIQAENASMPANLSSISFHFQTRSLAYEQTSSLLQTRMHMMMHWRDSRLV 273
Query: 306 WNAGEWG-CSTWLVSSERLWRPDVVLLN 386
W ++G ++ R+W+P + +LN
Sbjct: 274 WKPEDFGSLESFEHPDLRIWKPHMNVLN 301
>AY069859-1|AAL40004.1| 313|Drosophila melanogaster SD10415p
protein.
Length = 313
Score = 29.1 bits (62), Expect = 7.8
Identities = 16/82 (19%), Positives = 34/82 (41%), Gaps = 1/82 (1%)
Frame = +3
Query: 126 TSLSLMIDSLLATYDRESPPDSKIVVNLTLHLRHANIRESESTVRILADLQMNWIDKRLS 305
T ++ L + S P + ++ R ++ S ++ + M+W D RL
Sbjct: 214 TKTEKLLSHLNIQAENASMPANLSSISFHFQTRSLAYEQTSSLLQTRMHMMMHWRDSRLV 273
Query: 306 WNAGEWG-CSTWLVSSERLWRP 368
W ++G ++ R+W+P
Sbjct: 274 WKPEDFGSLESFEHPDLRIWKP 295
>AE013599-450|AAF59230.1| 1379|Drosophila melanogaster CG2105-PA,
isoform A protein.
Length = 1379
Score = 29.1 bits (62), Expect = 7.8
Identities = 19/50 (38%), Positives = 27/50 (54%)
Frame = +3
Query: 102 SAAECENATSLSLMIDSLLATYDRESPPDSKIVVNLTLHLRHANIRESES 251
S + E A+SL+L ++SLL YD++ K V L L +I ES S
Sbjct: 28 SRSRSERASSLALPLNSLLDFYDKQQ-EQCKSVTLLPLPSNSGSISESSS 76
>AE013599-449|AAS64900.1| 1397|Drosophila melanogaster CG2105-PB,
isoform B protein.
Length = 1397
Score = 29.1 bits (62), Expect = 7.8
Identities = 19/50 (38%), Positives = 27/50 (54%)
Frame = +3
Query: 102 SAAECENATSLSLMIDSLLATYDRESPPDSKIVVNLTLHLRHANIRESES 251
S + E A+SL+L ++SLL YD++ K V L L +I ES S
Sbjct: 28 SRSRSERASSLALPLNSLLDFYDKQQ-EQCKSVTLLPLPSNSGSISESSS 76
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 30,647,684
Number of Sequences: 53049
Number of extensions: 646207
Number of successful extensions: 1598
Number of sequences better than 10.0: 53
Number of HSP's better than 10.0 without gapping: 1459
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1554
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 3962724636
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -