Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP11_FL5_P09
(809 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U58738-4|AAB00604.1| 358|Caenorhabditis elegans Hypothetical pr... 57 2e-08
AF043700-1|AAB97571.2| 328|Caenorhabditis elegans Hypothetical ... 42 5e-04
AF036692-9|AAB88330.1| 389|Caenorhabditis elegans Hypothetical ... 40 0.003
AF016663-3|AAC70878.1| 1170|Caenorhabditis elegans Hypothetical ... 38 0.011
AF100669-1|AAK39265.1| 931|Caenorhabditis elegans Hypothetical ... 36 0.026
U58755-13|AAB00702.1| 348|Caenorhabditis elegans Collagen prote... 29 3.9
AF039044-12|AAG24130.2| 405|Caenorhabditis elegans Hypothetical... 29 5.2
AF016688-9|AAN65322.1| 816|Caenorhabditis elegans Hypothetical ... 29 5.2
AF016688-8|AAB66079.2| 848|Caenorhabditis elegans Hypothetical ... 29 5.2
Z69302-8|CAA93261.3| 420|Caenorhabditis elegans Hypothetical pr... 28 9.1
U41274-7|AAA82463.1| 1610|Caenorhabditis elegans Hypothetical pr... 28 9.1
>U58738-4|AAB00604.1| 358|Caenorhabditis elegans Hypothetical
protein F31A9.6 protein.
Length = 358
Score = 56.8 bits (131), Expect = 2e-08
Identities = 49/188 (26%), Positives = 85/188 (45%), Gaps = 2/188 (1%)
Frame = +2
Query: 8 FSLFINDIPRSPPTQLAL--FADDTTVYYSSRNKSLIASKLQSAALTLGQWFRKWRIDIN 181
F +++NDI P ++A FADDT +Y +S K+ + LQSA + W + ++ +N
Sbjct: 88 FGIYVNDISSILPEKVACKQFADDTKLY-ASTPKTESENNLQSALDAVVDWTKGSKLTLN 146
Query: 182 PAKSTAVLFQRGXXXXXXXXXXXXXXXXXXXXFGQPIPWARKVKYLGVTLDASMTFRPHI 361
+K+ V + G PI + LG + + F H
Sbjct: 147 QSKTVHVTVGKRRIDFKYHLD------------GYPIERKAITRDLGFLISEKLDFSDHW 194
Query: 362 KTVRDRAAFILGRLYPMICKRSKMSLRNKVTLYKTCIRPVMTYASVVFAHAARTHIDTLQ 541
+ + A F L ++ K S + + + LYKT IRP + Y +VV + ++ T++
Sbjct: 195 RKCINLAKFQLANMFN---KYSTSNKKLMILLYKTFIRPRLEYGTVVSSPTKKSDEKTIE 251
Query: 542 SLQSRFCR 565
S+Q+ F R
Sbjct: 252 SVQNAFTR 259
>AF043700-1|AAB97571.2| 328|Caenorhabditis elegans Hypothetical
protein K09H9.4 protein.
Length = 328
Score = 41.9 bits (94), Expect = 5e-04
Identities = 40/166 (24%), Positives = 70/166 (42%)
Frame = +2
Query: 68 DDTTVYYSSRNKSLIASKLQSAALTLGQWFRKWRIDINPAKSTAVLFQRGXXXXXXXXXX 247
DDT +Y S+ K+ + LQ+A + W R ++ ++ +K+ V R
Sbjct: 80 DDTKLYVSTP-KAETENNLQAALDAVVDWTRGAKLTLSQSKTVHVTVGRCRKDFKYHLD- 137
Query: 248 XXXXXXXXXXFGQPIPWARKVKYLGVTLDASMTFRPHIKTVRDRAAFILGRLYPMICKRS 427
G PI + LG + + F H K + A F L ++ +
Sbjct: 138 -----------GYPIERKTITRDLGFLISEKLDFSEHWKKSINLAKFQLANIFNQYSTSN 186
Query: 428 KMSLRNKVTLYKTCIRPVMTYASVVFAHAARTHIDTLQSLQSRFCR 565
K + + LYKT IRP + Y +VV + ++ ++S+Q+ F R
Sbjct: 187 KKLM---ILLYKTFIRPRLEYGTVVSSPTKKSDEKAIESVQNAFTR 229
>AF036692-9|AAB88330.1| 389|Caenorhabditis elegans Hypothetical
protein C44B12.7 protein.
Length = 389
Score = 39.5 bits (88), Expect = 0.003
Identities = 23/84 (27%), Positives = 41/84 (48%)
Frame = +2
Query: 287 PIPWARKVKYLGVTLDASMTFRPHIKTVRDRAAFILGRLYPMICKRSKMSLRNKVTLYKT 466
PI + + LG+ D+ +TF+PHIK + + L R ++ + L+KT
Sbjct: 188 PISPSNIARDLGILTDSKLTFKPHIKKI---VSLALLRCKQLLKSFKSLCPEFYCNLFKT 244
Query: 467 CIRPVMTYASVVFAHAARTHIDTL 538
I P++ Y S V++ + + TL
Sbjct: 245 YILPLIEYGSAVYSPKPSSSLSTL 268
>AF016663-3|AAC70878.1| 1170|Caenorhabditis elegans Hypothetical
protein F21E9.1 protein.
Length = 1170
Score = 37.5 bits (83), Expect = 0.011
Identities = 42/169 (24%), Positives = 70/169 (41%), Gaps = 2/169 (1%)
Frame = +2
Query: 8 FSLFIND--IPRSPPTQLALFADDTTVYYSSRNKSLIASKLQSAALTLGQWFRKWRIDIN 181
F LFIN+ I +P ++ FADD ++++ + +Q++ + W + + +
Sbjct: 892 FILFINNLLIDLAPTINISCFADDVKIFHTD------PTIIQNSIDIIVSWSKLNELPLA 945
Query: 182 PAKSTAVLFQRGXXXXXXXXXXXXXXXXXXXXFGQPIPWARKVKYLGVTLDASMTFRPHI 361
P KS L G G PI + V+ LG+ D + F HI
Sbjct: 946 PTKSA--LLALGTRNKNQSYSVD----------GVPITPSSTVRDLGLITDCKLKFEHHI 993
Query: 362 KTVRDRAAFILGRLYPMICKRSKMSLRNKVTLYKTCIRPVMTYASVVFA 508
V + + R ++ S S + LYKT + P+M Y S V+A
Sbjct: 994 VKV---SCLAMLRSKQILKAFSSNSPKFYAHLYKTYVAPIMNYCSEVYA 1039
>AF100669-1|AAK39265.1| 931|Caenorhabditis elegans Hypothetical
protein R11E3.3 protein.
Length = 931
Score = 36.3 bits (80), Expect = 0.026
Identities = 25/118 (21%), Positives = 46/118 (38%)
Frame = +2
Query: 8 FSLFINDIPRSPPTQLALFADDTTVYYSSRNKSLIASKLQSAALTLGQWFRKWRIDINPA 187
F+ ++ D+P T L +ADD ++ + A K+Q + ++ ++ + I+
Sbjct: 544 FTFYLKDMPTQQDTMLISYADDMSIIARDKKIEKAAEKVQLHIDEIAKYLKERGMSISAE 603
Query: 188 KSTAVLFQRGXXXXXXXXXXXXXXXXXXXXFGQPIPWARKVKYLGVTLDASMTFRPHI 361
KST +F PIP K LG+TL+ + H+
Sbjct: 604 KSTVTVFS--------CDPKEHKTKPDIYWMDDPIPVINAPKLLGITLNTMTGTKDHV 653
>U58755-13|AAB00702.1| 348|Caenorhabditis elegans Collagen protein
113 protein.
Length = 348
Score = 29.1 bits (62), Expect = 3.9
Identities = 14/32 (43%), Positives = 17/32 (53%)
Frame = -2
Query: 595 PHEPRSPDG*PAKAGL*GLEGVYVCAGRVSEH 500
P+ PR P G P + G G EG GR+ EH
Sbjct: 153 PNGPRGPTGPPGETGPSGPEGPPGNPGRIGEH 184
>AF039044-12|AAG24130.2| 405|Caenorhabditis elegans Hypothetical
protein F48G7.11 protein.
Length = 405
Score = 28.7 bits (61), Expect = 5.2
Identities = 22/75 (29%), Positives = 37/75 (49%), Gaps = 1/75 (1%)
Frame = +2
Query: 377 RAAFILGRLYPMICKRSKMSLRNKVTLYKTCIRPVMTYASVVFAHAARTHIDTLQSLQSR 556
RA + M+C+R SL++++ K C R M Y + + + +T D + S SR
Sbjct: 37 RAVMRSAKSQDMVCERESCSLKDRIQCCKIC-RLKMCYDAGMDPNKFQTGRDLISS-SSR 94
Query: 557 FCRL-AVGAPWFVRN 598
L +VG+P + N
Sbjct: 95 SSNLSSVGSPQSLAN 109
>AF016688-9|AAN65322.1| 816|Caenorhabditis elegans Hypothetical
protein F18A12.8b protein.
Length = 816
Score = 28.7 bits (61), Expect = 5.2
Identities = 18/61 (29%), Positives = 28/61 (45%)
Frame = +2
Query: 5 GFSLFINDIPRSPPTQLALFADDTTVYYSSRNKSLIASKLQSAALTLGQWFRKWRIDINP 184
G+ ND+P+ L L D+ YY KS++ + + L + F K DI+P
Sbjct: 579 GYPDVTNDLPKLDKQYLGLSISDSDTYYYIMKKSVVWMQSREFQ-KLTKPFDKHEFDISP 637
Query: 185 A 187
A
Sbjct: 638 A 638
>AF016688-8|AAB66079.2| 848|Caenorhabditis elegans Hypothetical
protein F18A12.8a protein.
Length = 848
Score = 28.7 bits (61), Expect = 5.2
Identities = 18/61 (29%), Positives = 28/61 (45%)
Frame = +2
Query: 5 GFSLFINDIPRSPPTQLALFADDTTVYYSSRNKSLIASKLQSAALTLGQWFRKWRIDINP 184
G+ ND+P+ L L D+ YY KS++ + + L + F K DI+P
Sbjct: 579 GYPDVTNDLPKLDKQYLGLSISDSDTYYYIMKKSVVWMQSREFQ-KLTKPFDKHEFDISP 637
Query: 185 A 187
A
Sbjct: 638 A 638
>Z69302-8|CAA93261.3| 420|Caenorhabditis elegans Hypothetical
protein F40F8.5 protein.
Length = 420
Score = 27.9 bits (59), Expect = 9.1
Identities = 11/22 (50%), Positives = 14/22 (63%)
Frame = +3
Query: 726 PNPDHVGASHRRRPXHVLTDPS 791
PN DH+G +H RR + DPS
Sbjct: 242 PNVDHIGHNHHRRKRNHDDDPS 263
>U41274-7|AAA82463.1| 1610|Caenorhabditis elegans Hypothetical
protein T04G9.1 protein.
Length = 1610
Score = 27.9 bits (59), Expect = 9.1
Identities = 19/59 (32%), Positives = 25/59 (42%), Gaps = 6/59 (10%)
Frame = +1
Query: 220 LTAYFLPH*EEKYHTPD---HPLRP---TYTLG*EGQVPGSHPGCIHDIPPAYKNSPRS 378
L F PH ++ P+ +PLRP T +P P +H IPP Y RS
Sbjct: 60 LNQRFGPHYNRRFTQPNGAPYPLRPHSDTRNAHRVYPIPVEPPQRVHSIPPVYHRQKRS 118
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,372,960
Number of Sequences: 27780
Number of extensions: 369613
Number of successful extensions: 954
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 915
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 953
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1987863822
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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