Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP11_FL5_P01
(844 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AL110479-15|CAB54361.2| 400|Caenorhabditis elegans Hypothetical... 39 0.005
U42839-9|AAC69013.3| 355|Caenorhabditis elegans Ligand-gated io... 38 0.007
Z81512-8|CAH19099.1| 509|Caenorhabditis elegans Hypothetical pr... 38 0.009
Z81512-7|CAD54133.1| 504|Caenorhabditis elegans Hypothetical pr... 38 0.009
AL033515-2|CAH19093.1| 509|Caenorhabditis elegans Hypothetical ... 38 0.009
AL033515-1|CAD54179.1| 504|Caenorhabditis elegans Hypothetical ... 38 0.009
AL033511-2|CAH19091.1| 509|Caenorhabditis elegans Hypothetical ... 38 0.009
AL033511-1|CAA22072.2| 504|Caenorhabditis elegans Hypothetical ... 38 0.009
Z67737-1|CAA91536.2| 399|Caenorhabditis elegans Hypothetical pr... 37 0.021
AF038614-9|AAB92062.2| 445|Caenorhabditis elegans Hypothetical ... 37 0.021
Z78417-4|CAB01685.2| 531|Caenorhabditis elegans Hypothetical pr... 35 0.063
X98600-1|CAA67197.1| 511|Caenorhabditis elegans alpha nicotinic... 35 0.083
X98599-1|CAA67196.1| 511|Caenorhabditis elegans alpha nicotinic... 35 0.083
U88175-2|AAB42282.2| 511|Caenorhabditis elegans Uncoordinated p... 35 0.083
Z78540-1|CAB01736.1| 409|Caenorhabditis elegans Hypothetical pr... 34 0.15
AC006834-2|AAF40009.1| 562|Caenorhabditis elegans Acetylcholine... 34 0.15
L23649-2|AAA27911.2| 433|Caenorhabditis elegans Coelomocyte upt... 33 0.19
AY611497-1|AAT42012.1| 433|Caenorhabditis elegans CUP-4 protein. 33 0.19
AF022973-5|AAC25797.4| 479|Caenorhabditis elegans Acetylcholine... 33 0.19
AC024783-1|AAY86294.1| 404|Caenorhabditis elegans Hypothetical ... 33 0.34
Z99281-1|CAB16504.2| 439|Caenorhabditis elegans Hypothetical pr... 32 0.44
Z67737-5|CAA91541.2| 401|Caenorhabditis elegans Hypothetical pr... 32 0.44
Z50029-2|CAA90341.3| 537|Caenorhabditis elegans Hypothetical pr... 32 0.44
AF016445-13|AAC69055.3| 371|Caenorhabditis elegans Ligand-gated... 32 0.44
AC084197-41|AAG23462.3| 493|Caenorhabditis elegans Ligand-gated... 32 0.44
Z66500-2|CAA91304.2| 500|Caenorhabditis elegans Hypothetical pr... 32 0.59
U39855-1|AAA81080.3| 615|Caenorhabditis elegans Hypothetical pr... 32 0.59
AF288374-1|AAK83056.1| 502|Caenorhabditis elegans nicotinic ace... 32 0.59
AC006708-21|AAF60421.3| 502|Caenorhabditis elegans Uncoordinate... 32 0.59
Z67737-2|CAA91537.3| 400|Caenorhabditis elegans Hypothetical pr... 31 1.0
X83887-1|CAA58764.1| 498|Caenorhabditis elegans alpha-1 subunit... 31 1.0
AY523511-1|AAR98633.1| 498|Caenorhabditis elegans acetylcholine... 31 1.0
AF022973-7|AAN84815.1| 480|Caenorhabditis elegans Acetylcholine... 31 1.0
AF022973-6|AAC25796.1| 498|Caenorhabditis elegans Acetylcholine... 31 1.0
Z99281-29|CAH04731.2| 438|Caenorhabditis elegans Hypothetical p... 30 1.8
Z92837-3|CAB07402.3| 502|Caenorhabditis elegans Hypothetical pr... 30 1.8
Z70266-4|CAA94206.3| 534|Caenorhabditis elegans Hypothetical pr... 30 2.4
AC024207-2|AAL77193.1| 425|Caenorhabditis elegans Hypothetical ... 30 2.4
AC024207-1|AAL77194.1| 428|Caenorhabditis elegans Hypothetical ... 30 2.4
Z67737-4|CAA91539.2| 401|Caenorhabditis elegans Hypothetical pr... 29 3.1
X86403-1|CAA60157.1| 575|Caenorhabditis elegans nicotinic acety... 29 3.1
U23525-1|AAK71377.1| 575|Caenorhabditis elegans Acetylcholine r... 29 3.1
Z54218-4|CAA90958.1| 1367|Caenorhabditis elegans Hypothetical pr... 29 4.1
Z49910-9|CAA90125.1| 1367|Caenorhabditis elegans Hypothetical pr... 29 4.1
U53337-6|AAA96188.2| 510|Caenorhabditis elegans Acetylcholine r... 29 4.1
U10401-10|AAA19062.2| 476|Caenorhabditis elegans Hypothetical p... 29 4.1
AF047656-7|AAC05108.2| 462|Caenorhabditis elegans Ligand-gated ... 29 4.1
AF016664-8|AAY44018.1| 397|Caenorhabditis elegans Hypothetical ... 29 4.1
AC024817-27|AAY86296.1| 636|Caenorhabditis elegans Hypothetical... 29 4.1
AC006808-1|AAF60813.1| 486|Caenorhabditis elegans Hypothetical ... 29 4.1
AF038606-6|AAB92023.2| 464|Caenorhabditis elegans Hypothetical ... 29 5.5
Z67737-3|CAA91538.2| 399|Caenorhabditis elegans Hypothetical pr... 28 7.2
AC084197-42|AAU87806.2| 544|Caenorhabditis elegans Acetylcholin... 28 7.2
Z83104-2|CAB54203.1| 563|Caenorhabditis elegans Hypothetical pr... 28 9.5
Z83104-1|CAB54204.1| 573|Caenorhabditis elegans Hypothetical pr... 28 9.5
Z70205-8|CAO78730.1| 270|Caenorhabditis elegans Hypothetical pr... 28 9.5
Z70205-7|CAA94120.2| 996|Caenorhabditis elegans Hypothetical pr... 28 9.5
Z67735-2|CAA91530.2| 403|Caenorhabditis elegans Hypothetical pr... 28 9.5
U88167-6|AAB42223.1| 461|Caenorhabditis elegans Acetylcholine r... 28 9.5
AL110490-4|CAB54450.1| 474|Caenorhabditis elegans Hypothetical ... 28 9.5
AF101309-5|ABD94097.1| 543|Caenorhabditis elegans Hypothetical ... 28 9.5
AF016674-6|AAB66129.1| 530|Caenorhabditis elegans Hypothetical ... 28 9.5
AB054992-1|BAB62002.1| 996|Caenorhabditis elegans peroxin protein. 28 9.5
>AL110479-15|CAB54361.2| 400|Caenorhabditis elegans Hypothetical
protein Y105C5B.16 protein.
Length = 400
Score = 38.7 bits (86), Expect = 0.005
Identities = 16/59 (27%), Positives = 30/59 (50%)
Frame = +2
Query: 164 YDRDSPPDSKIVVNLTLHLRHANIRESESTVRIQADLQMNWIDKRLSWNAGEWGCSTWL 340
YD ++P + L +L+ ++E + + + ++ W D RLSWNA W +T +
Sbjct: 64 YDNEAPKRYNYTIFL-YYLKLVEVQEPQEKISVVMEIMEYWYDARLSWNASAWQNTTMI 121
>U42839-9|AAC69013.3| 355|Caenorhabditis elegans Ligand-gated ion
channel protein 3 protein.
Length = 355
Score = 38.3 bits (85), Expect = 0.007
Identities = 25/88 (28%), Positives = 42/88 (47%), Gaps = 3/88 (3%)
Frame = +2
Query: 86 TCAIASAAECENATSLSLMIDSLLATYDRDSPPDSKIVVNLTLHLRHA-NIRESESTVRI 262
T +A +E +S S + LL +++ SPPD ++ ++ + L H I E +++
Sbjct: 56 TVGVAEFSEQYQGSS-SRLTRHLLEKHNKCSPPDGRVDISHNIELVHIIGINELNQNMQV 114
Query: 263 QADLQMNWIDKRLSWNAGEW-GCS-TWL 340
+ W D LSW E+ G TWL
Sbjct: 115 LVYIVQQWTDASLSWKVEEFRGIKHTWL 142
>Z81512-8|CAH19099.1| 509|Caenorhabditis elegans Hypothetical
protein Y44A6E.1b protein.
Length = 509
Score = 37.9 bits (84), Expect = 0.009
Identities = 19/70 (27%), Positives = 37/70 (52%), Gaps = 3/70 (4%)
Frame = +2
Query: 140 MIDSLLATYDRDSPPDSKIVVNLTLHLRHA-NIRESESTVRIQADLQMNWIDKRLSWNAG 316
+ + LL+ ++ ++PPD + V L L H I E + T+ + + +W+D L+W+
Sbjct: 70 LTEYLLSRHNLNAPPDGLLYVEYELELVHILGIDELKQTMTVLIYVDEHWVDPSLTWDPA 129
Query: 317 EWG--CSTWL 340
+G TW+
Sbjct: 130 LFGGITKTWI 139
>Z81512-7|CAD54133.1| 504|Caenorhabditis elegans Hypothetical
protein Y44A6E.1a protein.
Length = 504
Score = 37.9 bits (84), Expect = 0.009
Identities = 19/70 (27%), Positives = 37/70 (52%), Gaps = 3/70 (4%)
Frame = +2
Query: 140 MIDSLLATYDRDSPPDSKIVVNLTLHLRHA-NIRESESTVRIQADLQMNWIDKRLSWNAG 316
+ + LL+ ++ ++PPD + V L L H I E + T+ + + +W+D L+W+
Sbjct: 70 LTEYLLSRHNLNAPPDGLLYVEYELELVHILGIDELKQTMTVLIYVDEHWVDPSLTWDPA 129
Query: 317 EWG--CSTWL 340
+G TW+
Sbjct: 130 LFGGITKTWI 139
Score = 30.3 bits (65), Expect = 1.8
Identities = 14/45 (31%), Positives = 24/45 (53%), Gaps = 2/45 (4%)
Frame = +3
Query: 321 GAAALGWCPRERLWRPDVVLLNAAATTAGDYALR--ARVSNNGSV 449
G W P +++W PD+++ N A A+R AR+ NG++
Sbjct: 132 GGITKTWIPLDKIWVPDIIVFNMLAHEDLLSAVRAPARIHYNGTI 176
>AL033515-2|CAH19093.1| 509|Caenorhabditis elegans Hypothetical
protein Y44A6E.1b protein.
Length = 509
Score = 37.9 bits (84), Expect = 0.009
Identities = 19/70 (27%), Positives = 37/70 (52%), Gaps = 3/70 (4%)
Frame = +2
Query: 140 MIDSLLATYDRDSPPDSKIVVNLTLHLRHA-NIRESESTVRIQADLQMNWIDKRLSWNAG 316
+ + LL+ ++ ++PPD + V L L H I E + T+ + + +W+D L+W+
Sbjct: 70 LTEYLLSRHNLNAPPDGLLYVEYELELVHILGIDELKQTMTVLIYVDEHWVDPSLTWDPA 129
Query: 317 EWG--CSTWL 340
+G TW+
Sbjct: 130 LFGGITKTWI 139
>AL033515-1|CAD54179.1| 504|Caenorhabditis elegans Hypothetical
protein Y44A6E.1a protein.
Length = 504
Score = 37.9 bits (84), Expect = 0.009
Identities = 19/70 (27%), Positives = 37/70 (52%), Gaps = 3/70 (4%)
Frame = +2
Query: 140 MIDSLLATYDRDSPPDSKIVVNLTLHLRHA-NIRESESTVRIQADLQMNWIDKRLSWNAG 316
+ + LL+ ++ ++PPD + V L L H I E + T+ + + +W+D L+W+
Sbjct: 70 LTEYLLSRHNLNAPPDGLLYVEYELELVHILGIDELKQTMTVLIYVDEHWVDPSLTWDPA 129
Query: 317 EWG--CSTWL 340
+G TW+
Sbjct: 130 LFGGITKTWI 139
Score = 30.3 bits (65), Expect = 1.8
Identities = 14/45 (31%), Positives = 24/45 (53%), Gaps = 2/45 (4%)
Frame = +3
Query: 321 GAAALGWCPRERLWRPDVVLLNAAATTAGDYALR--ARVSNNGSV 449
G W P +++W PD+++ N A A+R AR+ NG++
Sbjct: 132 GGITKTWIPLDKIWVPDIIVFNMLAHEDLLSAVRAPARIHYNGTI 176
>AL033511-2|CAH19091.1| 509|Caenorhabditis elegans Hypothetical
protein Y44A6E.1b protein.
Length = 509
Score = 37.9 bits (84), Expect = 0.009
Identities = 19/70 (27%), Positives = 37/70 (52%), Gaps = 3/70 (4%)
Frame = +2
Query: 140 MIDSLLATYDRDSPPDSKIVVNLTLHLRHA-NIRESESTVRIQADLQMNWIDKRLSWNAG 316
+ + LL+ ++ ++PPD + V L L H I E + T+ + + +W+D L+W+
Sbjct: 70 LTEYLLSRHNLNAPPDGLLYVEYELELVHILGIDELKQTMTVLIYVDEHWVDPSLTWDPA 129
Query: 317 EWG--CSTWL 340
+G TW+
Sbjct: 130 LFGGITKTWI 139
>AL033511-1|CAA22072.2| 504|Caenorhabditis elegans Hypothetical
protein Y44A6E.1a protein.
Length = 504
Score = 37.9 bits (84), Expect = 0.009
Identities = 19/70 (27%), Positives = 37/70 (52%), Gaps = 3/70 (4%)
Frame = +2
Query: 140 MIDSLLATYDRDSPPDSKIVVNLTLHLRHA-NIRESESTVRIQADLQMNWIDKRLSWNAG 316
+ + LL+ ++ ++PPD + V L L H I E + T+ + + +W+D L+W+
Sbjct: 70 LTEYLLSRHNLNAPPDGLLYVEYELELVHILGIDELKQTMTVLIYVDEHWVDPSLTWDPA 129
Query: 317 EWG--CSTWL 340
+G TW+
Sbjct: 130 LFGGITKTWI 139
Score = 30.3 bits (65), Expect = 1.8
Identities = 14/45 (31%), Positives = 24/45 (53%), Gaps = 2/45 (4%)
Frame = +3
Query: 321 GAAALGWCPRERLWRPDVVLLNAAATTAGDYALR--ARVSNNGSV 449
G W P +++W PD+++ N A A+R AR+ NG++
Sbjct: 132 GGITKTWIPLDKIWVPDIIVFNMLAHEDLLSAVRAPARIHYNGTI 176
>Z67737-1|CAA91536.2| 399|Caenorhabditis elegans Hypothetical
protein T01H10.1 protein.
Length = 399
Score = 36.7 bits (81), Expect = 0.021
Identities = 18/53 (33%), Positives = 27/53 (50%)
Frame = +2
Query: 164 YDRDSPPDSKIVVNLTLHLRHANIRESESTVRIQADLQMNWIDKRLSWNAGEW 322
YD D+P + L +L+ + E E V + +L W D RLSWNA ++
Sbjct: 65 YDPDAPQRYNYTLFL-YNLKLIQVNEPEEQVSVVLELMEYWYDPRLSWNASDY 116
>AF038614-9|AAB92062.2| 445|Caenorhabditis elegans Hypothetical
protein F15E6.2 protein.
Length = 445
Score = 36.7 bits (81), Expect = 0.021
Identities = 18/80 (22%), Positives = 35/80 (43%)
Frame = +2
Query: 101 SAAECENATSLSLMIDSLLATYDRDSPPDSKIVVNLTLHLRHANIRESESTVRIQADLQM 280
S C+ + + TY + +K+V ++ + + I E V++ +
Sbjct: 54 SCHSCQGGDRAWKLRTHIQTTYQNATDNKTKVVRVESVRINNVEIDERRQNVKVFGRFVL 113
Query: 281 NWIDKRLSWNAGEWGCSTWL 340
+W D +SW+ +WG S WL
Sbjct: 114 SWNDTMVSWDKEQWGLS-WL 132
>Z78417-4|CAB01685.2| 531|Caenorhabditis elegans Hypothetical
protein C35C5.5 protein.
Length = 531
Score = 35.1 bits (77), Expect = 0.063
Identities = 19/70 (27%), Positives = 35/70 (50%), Gaps = 5/70 (7%)
Frame = +2
Query: 131 LSLMIDSLLATYDRDSPP----DSKIVVNLTLHL-RHANIRESESTVRIQADLQMNWIDK 295
+S ++++LL Y++ P + V +L R ++ E + L+M W DK
Sbjct: 29 VSQLLENLLTDYNKAVRPVHNASDALKVKFGANLCRLIDVDEVNQVLTTSLWLEMQWYDK 88
Query: 296 RLSWNAGEWG 325
+L+WN +WG
Sbjct: 89 KLTWNPTDWG 98
>X98600-1|CAA67197.1| 511|Caenorhabditis elegans alpha nicotinic
acetylcholine receptorsubunit protein.
Length = 511
Score = 34.7 bits (76), Expect = 0.083
Identities = 17/67 (25%), Positives = 33/67 (49%), Gaps = 5/67 (7%)
Frame = +2
Query: 140 MIDSLLATYDR----DSPPDSKIVVNLTLHLRHA-NIRESESTVRIQADLQMNWIDKRLS 304
+ D L+ Y+R + P+ + + L L L ++ E + + L+ WID++LS
Sbjct: 30 LYDDLMVNYNRHRRPSTSPNKPLTIKLKLRLSQIIDVHEIDQIMTCSVWLKQTWIDRKLS 89
Query: 305 WNAGEWG 325
W+ +G
Sbjct: 90 WDPVNYG 96
Score = 28.7 bits (61), Expect = 5.5
Identities = 14/46 (30%), Positives = 23/46 (50%), Gaps = 1/46 (2%)
Frame = +3
Query: 321 GAAALGWCPRERLWRPDVVLLNAAATTAG-DYALRARVSNNGSVSW 455
G + + P E +W PD+VL N A + + +A + G V+W
Sbjct: 96 GGVNVLYVPYEMIWVPDIVLYNNADSNYNITISTKATLHYTGEVTW 141
>X98599-1|CAA67196.1| 511|Caenorhabditis elegans alpha nicotinic
acetylcholine receptorsubunit protein.
Length = 511
Score = 34.7 bits (76), Expect = 0.083
Identities = 17/67 (25%), Positives = 33/67 (49%), Gaps = 5/67 (7%)
Frame = +2
Query: 140 MIDSLLATYDR----DSPPDSKIVVNLTLHLRHA-NIRESESTVRIQADLQMNWIDKRLS 304
+ D L+ Y+R + P+ + + L L L ++ E + + L+ WID++LS
Sbjct: 30 LYDDLMVNYNRHRRPSTSPNKPLTIKLKLRLSQIIDVHEIDQIMTCSVWLKQTWIDRKLS 89
Query: 305 WNAGEWG 325
W+ +G
Sbjct: 90 WDPVNYG 96
Score = 28.7 bits (61), Expect = 5.5
Identities = 14/46 (30%), Positives = 23/46 (50%), Gaps = 1/46 (2%)
Frame = +3
Query: 321 GAAALGWCPRERLWRPDVVLLNAAATTAG-DYALRARVSNNGSVSW 455
G + + P E +W PD+VL N A + + +A + G V+W
Sbjct: 96 GGVNVLYVPYEMIWVPDIVLYNNADSNYNITISTKATLHYTGEVTW 141
>U88175-2|AAB42282.2| 511|Caenorhabditis elegans Uncoordinated
protein 38 protein.
Length = 511
Score = 34.7 bits (76), Expect = 0.083
Identities = 17/67 (25%), Positives = 33/67 (49%), Gaps = 5/67 (7%)
Frame = +2
Query: 140 MIDSLLATYDR----DSPPDSKIVVNLTLHLRHA-NIRESESTVRIQADLQMNWIDKRLS 304
+ D L+ Y+R + P+ + + L L L ++ E + + L+ WID++LS
Sbjct: 30 LYDDLMVNYNRHRRPSTSPNKPLTIKLKLRLSQIIDVHEIDQIMTCSVWLKQTWIDRKLS 89
Query: 305 WNAGEWG 325
W+ +G
Sbjct: 90 WDPVNYG 96
Score = 28.7 bits (61), Expect = 5.5
Identities = 14/46 (30%), Positives = 23/46 (50%), Gaps = 1/46 (2%)
Frame = +3
Query: 321 GAAALGWCPRERLWRPDVVLLNAAATTAG-DYALRARVSNNGSVSW 455
G + + P E +W PD+VL N A + + +A + G V+W
Sbjct: 96 GGVNVLYVPYEMIWVPDIVLYNNADSNYNITISTKATLHYTGEVTW 141
>Z78540-1|CAB01736.1| 409|Caenorhabditis elegans Hypothetical
protein C33G3.3 protein.
Length = 409
Score = 33.9 bits (74), Expect = 0.15
Identities = 21/80 (26%), Positives = 36/80 (45%), Gaps = 2/80 (2%)
Frame = +2
Query: 116 ENATSLS-LMIDSLLATYDRDSPPDSKIVVNLT-LHLRHANIRESESTVRIQADLQMNWI 289
E+A L+ L I +A+ + + +N L+H + E + I L+++W
Sbjct: 33 ESAKKLAKLNIPHAIASIPPNYLSQQPVTINFAQFTLQHFELNEHLKDISIHGYLELSWH 92
Query: 290 DKRLSWNAGEWGCSTWLVSS 349
D RL WN W + +V S
Sbjct: 93 DDRLMWNQDTWKKNKLVVHS 112
>AC006834-2|AAF40009.1| 562|Caenorhabditis elegans Acetylcholine
receptor protein 6 protein.
Length = 562
Score = 33.9 bits (74), Expect = 0.15
Identities = 13/44 (29%), Positives = 25/44 (56%)
Frame = +2
Query: 230 NIRESESTVRIQADLQMNWIDKRLSWNAGEWGCSTWLVSSGTLV 361
++ E + + ++ L +W+D RLSWN E+G T + G ++
Sbjct: 44 DVHEKDQVITLKGTLIHHWLDYRLSWNPDEFGNITLMHFPGEML 87
Score = 27.9 bits (59), Expect = 9.5
Identities = 14/38 (36%), Positives = 19/38 (50%), Gaps = 1/38 (2%)
Frame = +3
Query: 345 PRERLWRPDVVLL-NAAATTAGDYALRARVSNNGSVSW 455
P E LW PD++L NA + + VS G V+W
Sbjct: 83 PGEMLWLPDIILYNNAHGSPWVSETTQVHVSFEGRVTW 120
>L23649-2|AAA27911.2| 433|Caenorhabditis elegans Coelomocyte uptake
defective protein4 protein.
Length = 433
Score = 33.5 bits (73), Expect = 0.19
Identities = 11/38 (28%), Positives = 22/38 (57%)
Frame = +2
Query: 197 VVNLTLHLRHANIRESESTVRIQADLQMNWIDKRLSWN 310
+V++ H+ H +I + E T+ + + M W D+ L W+
Sbjct: 74 IVDVHWHIIHVSINQREQTMTVHGHIYMRWFDEFLVWD 111
>AY611497-1|AAT42012.1| 433|Caenorhabditis elegans CUP-4 protein.
Length = 433
Score = 33.5 bits (73), Expect = 0.19
Identities = 11/38 (28%), Positives = 22/38 (57%)
Frame = +2
Query: 197 VVNLTLHLRHANIRESESTVRIQADLQMNWIDKRLSWN 310
+V++ H+ H +I + E T+ + + M W D+ L W+
Sbjct: 74 IVDVHWHIIHVSINQREQTMTVHGHIYMRWFDEFLVWD 111
>AF022973-5|AAC25797.4| 479|Caenorhabditis elegans Acetylcholine
receptor protein 15 protein.
Length = 479
Score = 33.5 bits (73), Expect = 0.19
Identities = 20/61 (32%), Positives = 34/61 (55%), Gaps = 5/61 (8%)
Frame = +2
Query: 140 MIDSLLATYDRDSPP--DSK--IVVNLTLHLRHA-NIRESESTVRIQADLQMNWIDKRLS 304
+I+ L++ Y R+ P DS +VV+L + L+ N+ E E + + A L+ W D+ L
Sbjct: 25 LINDLMSGYVREERPTLDSSKPVVVSLGVFLQQIINLSEKEEQLEVNAWLKFQWRDENLR 84
Query: 305 W 307
W
Sbjct: 85 W 85
>AC024783-1|AAY86294.1| 404|Caenorhabditis elegans Hypothetical
protein Y45G5AL.2 protein.
Length = 404
Score = 32.7 bits (71), Expect = 0.34
Identities = 14/49 (28%), Positives = 26/49 (53%)
Frame = +2
Query: 179 PPDSKIVVNLTLHLRHANIRESESTVRIQADLQMNWIDKRLSWNAGEWG 325
PP +I + L++ ++ + E E D + +W D RLSW+ ++G
Sbjct: 79 PPRFEITIQLSM-MKLVEVVEPEEKATFLFDYRADWYDTRLSWDPEDYG 126
>Z99281-1|CAB16504.2| 439|Caenorhabditis elegans Hypothetical
protein Y57G11C.2 protein.
Length = 439
Score = 32.3 bits (70), Expect = 0.44
Identities = 18/82 (21%), Positives = 38/82 (46%), Gaps = 5/82 (6%)
Frame = +2
Query: 110 ECENATSLSLMIDSLLATYDRDSPPDSK----IVVNLTLHLRHA-NIRESESTVRIQADL 274
E + T + D L+ YD P + +++N++++ + +E T+ ++
Sbjct: 21 EVDGITVAEQLKDVLMEGYDSSIRPVNNERDILIINISMNTMSVLTLDPAEETINFSSEF 80
Query: 275 QMNWIDKRLSWNAGEWGCSTWL 340
+ W D+ L WN ++ TWL
Sbjct: 81 ILQWKDEFLFWNKSDYNI-TWL 101
>Z67737-5|CAA91541.2| 401|Caenorhabditis elegans Hypothetical
protein T01H10.6 protein.
Length = 401
Score = 32.3 bits (70), Expect = 0.44
Identities = 13/36 (36%), Positives = 20/36 (55%)
Frame = +2
Query: 206 LTLHLRHANIRESESTVRIQADLQMNWIDKRLSWNA 313
L +L+ ++E E V + +L W D RLSWN+
Sbjct: 79 LLYYLKLVEVQEPEEKVSVVLELVEQWYDPRLSWNS 114
>Z50029-2|CAA90341.3| 537|Caenorhabditis elegans Hypothetical
protein ZC504.2 protein.
Length = 537
Score = 32.3 bits (70), Expect = 0.44
Identities = 12/36 (33%), Positives = 18/36 (50%)
Frame = +2
Query: 218 LRHANIRESESTVRIQADLQMNWIDKRLSWNAGEWG 325
+R ++ E + L+M W D RL W+ G WG
Sbjct: 59 IRIIDVDEVNQVLTTNLWLEMQWFDYRLMWDPGRWG 94
>AF016445-13|AAC69055.3| 371|Caenorhabditis elegans Ligand-gated
ion channel protein 1 protein.
Length = 371
Score = 32.3 bits (70), Expect = 0.44
Identities = 15/49 (30%), Positives = 26/49 (53%)
Frame = +2
Query: 179 PPDSKIVVNLTLHLRHANIRESESTVRIQADLQMNWIDKRLSWNAGEWG 325
PP +++ + + + L+ ++ E E V D W D+RL WN E+G
Sbjct: 51 PPITELKLTMAM-LKLVDVVEVEEKVTFLFDYLAEWTDQRLKWNPLEYG 98
>AC084197-41|AAG23462.3| 493|Caenorhabditis elegans Ligand-gated
ion channel protein 10 protein.
Length = 493
Score = 32.3 bits (70), Expect = 0.44
Identities = 23/93 (24%), Positives = 42/93 (45%), Gaps = 7/93 (7%)
Frame = +2
Query: 104 AAECENATSL----SLMIDSLLATYDRDSPP--DSKIVVNLTLHLRHA-NIRESESTVRI 262
A CEN +L S +++ + YDR P ++VN+T+ L ++E++
Sbjct: 57 ALNCENFRTLDNETSAILNDIFVGYDRRVLPFVQGPVLVNMTIVLGILIELKENQQLAAY 116
Query: 263 QADLQMNWIDKRLSWNAGEWGCSTWLVSSGTLV 361
W D RLSW+ ++ ++ T+V
Sbjct: 117 VISHTQRWYDGRLSWDPSKYRGQREVIVPQTMV 149
>Z66500-2|CAA91304.2| 500|Caenorhabditis elegans Hypothetical
protein T05C12.2 protein.
Length = 500
Score = 31.9 bits (69), Expect = 0.59
Identities = 15/33 (45%), Positives = 22/33 (66%), Gaps = 1/33 (3%)
Frame = +3
Query: 354 RLWRPDVVLLNAAATT-AGDYALRARVSNNGSV 449
+LWRPDV+L N+ + + Y+ R VS+NG V
Sbjct: 106 KLWRPDVLLFNSVSESFDSTYSSRFIVSSNGDV 138
>U39855-1|AAA81080.3| 615|Caenorhabditis elegans Hypothetical
protein F18G5.4 protein.
Length = 615
Score = 31.9 bits (69), Expect = 0.59
Identities = 13/41 (31%), Positives = 25/41 (60%), Gaps = 2/41 (4%)
Frame = +3
Query: 339 WCPRERLWRPDVVLLNAAATT--AGDYALRARVSNNGSVSW 455
+ P R+W+PD++L+N A A + V+++G+V+W
Sbjct: 188 YIPHARIWKPDIILVNNAIREYYASLVSTDVMVTSDGNVTW 228
Score = 30.7 bits (66), Expect = 1.4
Identities = 11/28 (39%), Positives = 16/28 (57%)
Frame = +2
Query: 239 ESESTVRIQADLQMNWIDKRLSWNAGEW 322
E + ++ L +NW+D RLSWN W
Sbjct: 154 ERNQALTTRSWLNINWMDPRLSWNESLW 181
>AF288374-1|AAK83056.1| 502|Caenorhabditis elegans nicotinic
acetylcholine receptoralpha subunit protein.
Length = 502
Score = 31.9 bits (69), Expect = 0.59
Identities = 17/49 (34%), Positives = 28/49 (57%), Gaps = 4/49 (8%)
Frame = +3
Query: 321 GAAALGWCPRERLWRPDVVLLNAAATTAGDYAL----RARVSNNGSVSW 455
G + + P + +W PDVVL N A G+Y + +A+++ NG+V W
Sbjct: 96 GGVEVLYVPSDTIWLPDVVLYNNA---DGNYQVTIMTKAKLTYNGTVEW 141
Score = 29.5 bits (63), Expect = 3.1
Identities = 18/67 (26%), Positives = 33/67 (49%), Gaps = 5/67 (7%)
Frame = +2
Query: 140 MIDSLLATYDRDSPPDSK----IVVNLTLHLRHA-NIRESESTVRIQADLQMNWIDKRLS 304
+ + L+A Y++ P S+ +VV L L ++ E + LQ +W+D +L
Sbjct: 30 LFEDLIADYNKLVRPVSENGETLVVTFKLKLSQLLDVHEKNQIMTTNVWLQHSWMDYKLR 89
Query: 305 WNAGEWG 325
W+ E+G
Sbjct: 90 WDPVEYG 96
>AC006708-21|AAF60421.3| 502|Caenorhabditis elegans Uncoordinated
protein 63 protein.
Length = 502
Score = 31.9 bits (69), Expect = 0.59
Identities = 17/49 (34%), Positives = 28/49 (57%), Gaps = 4/49 (8%)
Frame = +3
Query: 321 GAAALGWCPRERLWRPDVVLLNAAATTAGDYAL----RARVSNNGSVSW 455
G + + P + +W PDVVL N A G+Y + +A+++ NG+V W
Sbjct: 96 GGVEVLYVPSDTIWLPDVVLYNNA---DGNYQVTIMTKAKLTYNGTVEW 141
Score = 29.5 bits (63), Expect = 3.1
Identities = 18/67 (26%), Positives = 33/67 (49%), Gaps = 5/67 (7%)
Frame = +2
Query: 140 MIDSLLATYDRDSPPDSK----IVVNLTLHLRHA-NIRESESTVRIQADLQMNWIDKRLS 304
+ + L+A Y++ P S+ +VV L L ++ E + LQ +W+D +L
Sbjct: 30 LFEDLIADYNKLVRPVSENGETLVVTFKLKLSQLLDVHEKNQIMTTNVWLQHSWMDYKLR 89
Query: 305 WNAGEWG 325
W+ E+G
Sbjct: 90 WDPVEYG 96
>Z67737-2|CAA91537.3| 400|Caenorhabditis elegans Hypothetical
protein T01H10.2 protein.
Length = 400
Score = 31.1 bits (67), Expect = 1.0
Identities = 16/50 (32%), Positives = 23/50 (46%)
Frame = +2
Query: 164 YDRDSPPDSKIVVNLTLHLRHANIRESESTVRIQADLQMNWIDKRLSWNA 313
YD D+P + L L+ + E V + ++ W D RLSWNA
Sbjct: 64 YDPDAPKRYNYSIML-YSLKLVEVNEPAEKVAVVMEIMEYWYDIRLSWNA 112
>X83887-1|CAA58764.1| 498|Caenorhabditis elegans alpha-1 subunit of
nicotinic acetylcholinereceptor protein.
Length = 498
Score = 31.1 bits (67), Expect = 1.0
Identities = 23/85 (27%), Positives = 37/85 (43%), Gaps = 5/85 (5%)
Frame = +2
Query: 86 TCAIASAAECENATSLSLMIDSLLATYDRDSPPDSKIVVNLTLHLRHA-----NIRESES 250
+CAI +A + L D L+ Y+ P + +T+HL+ A ++ E
Sbjct: 9 SCAILAAPTLGSLQERRLYED-LMRNYNNLERPVANHSEPVTVHLKVALQQIIDVDEKNQ 67
Query: 251 TVRIQADLQMNWIDKRLSWNAGEWG 325
V + A L W D L W+ E+G
Sbjct: 68 VVYVNAWLDYTWNDYNLVWDKAEYG 92
Score = 28.3 bits (60), Expect = 7.2
Identities = 13/38 (34%), Positives = 19/38 (50%), Gaps = 1/38 (2%)
Frame = +3
Query: 345 PRERLWRPDVVLLNAAATT-AGDYALRARVSNNGSVSW 455
P ++W+PDV+L N+ T Y V + G V W
Sbjct: 100 PAGKIWKPDVLLYNSVDTNFDSTYQTNMIVYSTGLVHW 137
>AY523511-1|AAR98633.1| 498|Caenorhabditis elegans acetylcholine
receptor (57.1 kD)alternative variant 1 protein.
Length = 498
Score = 31.1 bits (67), Expect = 1.0
Identities = 23/85 (27%), Positives = 37/85 (43%), Gaps = 5/85 (5%)
Frame = +2
Query: 86 TCAIASAAECENATSLSLMIDSLLATYDRDSPPDSKIVVNLTLHLRHA-----NIRESES 250
+CAI +A + L D L+ Y+ P + +T+HL+ A ++ E
Sbjct: 9 SCAILAAPTLGSLQERRLYED-LMRNYNNLERPVANHSEPVTVHLKVALQQIIDVDEKNQ 67
Query: 251 TVRIQADLQMNWIDKRLSWNAGEWG 325
V + A L W D L W+ E+G
Sbjct: 68 VVYVNAWLDYTWNDYNLVWDKAEYG 92
Score = 28.3 bits (60), Expect = 7.2
Identities = 13/38 (34%), Positives = 19/38 (50%), Gaps = 1/38 (2%)
Frame = +3
Query: 345 PRERLWRPDVVLLNAAATT-AGDYALRARVSNNGSVSW 455
P ++W+PDV+L N+ T Y V + G V W
Sbjct: 100 PAGKIWKPDVLLYNSVDTNFDSTYQTNMIVYSTGLVHW 137
>AF022973-7|AAN84815.1| 480|Caenorhabditis elegans Acetylcholine
receptor protein16, isoform b protein.
Length = 480
Score = 31.1 bits (67), Expect = 1.0
Identities = 23/85 (27%), Positives = 37/85 (43%), Gaps = 5/85 (5%)
Frame = +2
Query: 86 TCAIASAAECENATSLSLMIDSLLATYDRDSPPDSKIVVNLTLHLRHA-----NIRESES 250
+CAI +A + L D L+ Y+ P + +T+HL+ A ++ E
Sbjct: 9 SCAILAAPTLGSLQERRLYED-LMRNYNNLERPVANHSEPVTVHLKVALQQIIDVDEKNQ 67
Query: 251 TVRIQADLQMNWIDKRLSWNAGEWG 325
V + A L W D L W+ E+G
Sbjct: 68 VVYVNAWLDYTWNDYNLVWDKAEYG 92
Score = 28.3 bits (60), Expect = 7.2
Identities = 13/38 (34%), Positives = 19/38 (50%), Gaps = 1/38 (2%)
Frame = +3
Query: 345 PRERLWRPDVVLLNAAATT-AGDYALRARVSNNGSVSW 455
P ++W+PDV+L N+ T Y V + G V W
Sbjct: 100 PAGKIWKPDVLLYNSVDTNFDSTYQTNMIVYSTGLVHW 137
>AF022973-6|AAC25796.1| 498|Caenorhabditis elegans Acetylcholine
receptor protein16, isoform a protein.
Length = 498
Score = 31.1 bits (67), Expect = 1.0
Identities = 23/85 (27%), Positives = 37/85 (43%), Gaps = 5/85 (5%)
Frame = +2
Query: 86 TCAIASAAECENATSLSLMIDSLLATYDRDSPPDSKIVVNLTLHLRHA-----NIRESES 250
+CAI +A + L D L+ Y+ P + +T+HL+ A ++ E
Sbjct: 9 SCAILAAPTLGSLQERRLYED-LMRNYNNLERPVANHSEPVTVHLKVALQQIIDVDEKNQ 67
Query: 251 TVRIQADLQMNWIDKRLSWNAGEWG 325
V + A L W D L W+ E+G
Sbjct: 68 VVYVNAWLDYTWNDYNLVWDKAEYG 92
Score = 28.3 bits (60), Expect = 7.2
Identities = 13/38 (34%), Positives = 19/38 (50%), Gaps = 1/38 (2%)
Frame = +3
Query: 345 PRERLWRPDVVLLNAAATT-AGDYALRARVSNNGSVSW 455
P ++W+PDV+L N+ T Y V + G V W
Sbjct: 100 PAGKIWKPDVLLYNSVDTNFDSTYQTNMIVYSTGLVHW 137
>Z99281-29|CAH04731.2| 438|Caenorhabditis elegans Hypothetical
protein Y57G11C.49 protein.
Length = 438
Score = 30.3 bits (65), Expect = 1.8
Identities = 18/82 (21%), Positives = 36/82 (43%), Gaps = 5/82 (6%)
Frame = +2
Query: 110 ECENATSLSLMIDSLLATYDRDSPP----DSKIVVNLTLH-LRHANIRESESTVRIQADL 274
E + T + D L+ YD P + +N++++ + + +E T+ +
Sbjct: 21 EIDGITVSEQLKDVLMEGYDSSIRPVINERDTLFINISINSMSFLTLDPAEETINFSGEF 80
Query: 275 QMNWIDKRLSWNAGEWGCSTWL 340
+ W D+ L WN ++ TWL
Sbjct: 81 ILQWKDEFLFWNKSDYNI-TWL 101
>Z92837-3|CAB07402.3| 502|Caenorhabditis elegans Hypothetical
protein R03E1.3 protein.
Length = 502
Score = 30.3 bits (65), Expect = 1.8
Identities = 14/54 (25%), Positives = 27/54 (50%), Gaps = 1/54 (1%)
Frame = +2
Query: 200 VNLTLHLRHAN-IRESESTVRIQADLQMNWIDKRLSWNAGEWGCSTWLVSSGTL 358
VN+ L + H + E E T + + WID+ + W+A + + +S+ +L
Sbjct: 54 VNVFLSIAHVEKVDEHEQTALVHGHIWATWIDEYMQWDAKKENVTKLTISAHSL 107
>Z70266-4|CAA94206.3| 534|Caenorhabditis elegans Hypothetical
protein C40C9.2 protein.
Length = 534
Score = 29.9 bits (64), Expect = 2.4
Identities = 11/45 (24%), Positives = 26/45 (57%), Gaps = 1/45 (2%)
Frame = +2
Query: 194 IVVNLTLHLRHA-NIRESESTVRIQADLQMNWIDKRLSWNAGEWG 325
+VV++ ++L+ ++ E + + A ++ W D +L W+ E+G
Sbjct: 53 LVVSVKIYLQQILDVDEKNQVITLVAWIEYQWTDYKLKWDPSEYG 97
>AC024207-2|AAL77193.1| 425|Caenorhabditis elegans Hypothetical
protein Y74E4A.1a protein.
Length = 425
Score = 29.9 bits (64), Expect = 2.4
Identities = 10/23 (43%), Positives = 15/23 (65%)
Frame = +2
Query: 254 VRIQADLQMNWIDKRLSWNAGEW 322
+ I L+++W D+RL WN EW
Sbjct: 101 MNINGFLKLSWKDRRLRWNPEEW 123
>AC024207-1|AAL77194.1| 428|Caenorhabditis elegans Hypothetical
protein Y74E4A.1b protein.
Length = 428
Score = 29.9 bits (64), Expect = 2.4
Identities = 10/23 (43%), Positives = 15/23 (65%)
Frame = +2
Query: 254 VRIQADLQMNWIDKRLSWNAGEW 322
+ I L+++W D+RL WN EW
Sbjct: 101 MNINGFLKLSWKDRRLRWNPEEW 123
>Z67737-4|CAA91539.2| 401|Caenorhabditis elegans Hypothetical
protein T01H10.5 protein.
Length = 401
Score = 29.5 bits (63), Expect = 3.1
Identities = 12/35 (34%), Positives = 18/35 (51%)
Frame = +2
Query: 206 LTLHLRHANIRESESTVRIQADLQMNWIDKRLSWN 310
L +L+ ++E V + +L W D RLSWN
Sbjct: 79 LLYYLKLVEVQEPAEKVSVVLELVERWYDPRLSWN 113
>X86403-1|CAA60157.1| 575|Caenorhabditis elegans nicotinic
acetylcholine receptor protein.
Length = 575
Score = 29.5 bits (63), Expect = 3.1
Identities = 13/38 (34%), Positives = 20/38 (52%), Gaps = 1/38 (2%)
Frame = +3
Query: 345 PRERLWRPDVVLL-NAAATTAGDYALRARVSNNGSVSW 455
P +R+W PD+VL NA + V ++G V+W
Sbjct: 138 PSDRVWLPDIVLFNNADGNYEVSFKSNVFVDHHGDVTW 175
Score = 29.1 bits (62), Expect = 4.1
Identities = 11/32 (34%), Positives = 17/32 (53%)
Frame = +2
Query: 230 NIRESESTVRIQADLQMNWIDKRLSWNAGEWG 325
N+ E ++ L M W D +L+WN E+G
Sbjct: 99 NVDEKNQILQTNVWLTMKWNDFQLAWNPAEYG 130
>U23525-1|AAK71377.1| 575|Caenorhabditis elegans Acetylcholine
receptor protein 2 protein.
Length = 575
Score = 29.5 bits (63), Expect = 3.1
Identities = 13/38 (34%), Positives = 20/38 (52%), Gaps = 1/38 (2%)
Frame = +3
Query: 345 PRERLWRPDVVLL-NAAATTAGDYALRARVSNNGSVSW 455
P +R+W PD+VL NA + V ++G V+W
Sbjct: 138 PSDRVWLPDIVLFNNADGNYEVSFKSNVFVDHHGDVTW 175
Score = 29.1 bits (62), Expect = 4.1
Identities = 11/32 (34%), Positives = 17/32 (53%)
Frame = +2
Query: 230 NIRESESTVRIQADLQMNWIDKRLSWNAGEWG 325
N+ E ++ L M W D +L+WN E+G
Sbjct: 99 NVDEKNQILQTNVWLTMKWNDFQLAWNPAEYG 130
>Z54218-4|CAA90958.1| 1367|Caenorhabditis elegans Hypothetical
protein F44G4.8 protein.
Length = 1367
Score = 29.1 bits (62), Expect = 4.1
Identities = 14/45 (31%), Positives = 25/45 (55%)
Frame = -2
Query: 372 RQASTSVPEDTSQVLQPHSPAFQLSRLSIQFI*RSACIRTVDSDS 238
+ STS+ ++ S V+ P +P F+ IQ + +RT+ +DS
Sbjct: 116 KDGSTSLIKEESVVMDPRAPDFRSMDSDIQVAEHNITMRTIKNDS 160
>Z49910-9|CAA90125.1| 1367|Caenorhabditis elegans Hypothetical
protein F44G4.8 protein.
Length = 1367
Score = 29.1 bits (62), Expect = 4.1
Identities = 14/45 (31%), Positives = 25/45 (55%)
Frame = -2
Query: 372 RQASTSVPEDTSQVLQPHSPAFQLSRLSIQFI*RSACIRTVDSDS 238
+ STS+ ++ S V+ P +P F+ IQ + +RT+ +DS
Sbjct: 116 KDGSTSLIKEESVVMDPRAPDFRSMDSDIQVAEHNITMRTIKNDS 160
>U53337-6|AAA96188.2| 510|Caenorhabditis elegans Acetylcholine
receptor protein 10 protein.
Length = 510
Score = 29.1 bits (62), Expect = 4.1
Identities = 12/35 (34%), Positives = 20/35 (57%), Gaps = 1/35 (2%)
Frame = +3
Query: 354 RLWRPDVVLLNAAATT-AGDYALRARVSNNGSVSW 455
++WRPD++L N+A+ + V N G V+W
Sbjct: 48 QIWRPDILLYNSASEDFDSSFKSNEVVYNTGEVNW 82
>U10401-10|AAA19062.2| 476|Caenorhabditis elegans Hypothetical
protein T20B12.9 protein.
Length = 476
Score = 29.1 bits (62), Expect = 4.1
Identities = 22/69 (31%), Positives = 35/69 (50%), Gaps = 3/69 (4%)
Frame = +2
Query: 110 ECENATSLSLMIDSLLATYDRDSPPDSKIVVNLTLHLRHANIRE-SESTVRIQADLQMN- 283
E + +L +ID+LL YD P+++ VN+T+ L + SE T D+ +
Sbjct: 9 EFNSRINLGKLIDTLLTDYDTHLLPEAE-GVNVTIELHVQGVSGISEITGDFSLDVMYSE 67
Query: 284 -WIDKRLSW 307
W D RLS+
Sbjct: 68 IWQDPRLSF 76
>AF047656-7|AAC05108.2| 462|Caenorhabditis elegans Ligand-gated ion
channel protein 6 protein.
Length = 462
Score = 29.1 bits (62), Expect = 4.1
Identities = 17/74 (22%), Positives = 35/74 (47%), Gaps = 2/74 (2%)
Frame = +2
Query: 95 IASAAECENATSLSLMIDSLLATYDRD-SPPDSKIVVNLTLH-LRHANIRESESTVRIQA 268
+ + A E + + +L+ TYD D P D +V +T + ++ +++ T++
Sbjct: 17 LTAVAFLETSNTETLLQQLFNQTYDVDMKPSDDLTMVTITPNTFILLSMDQTQETIQYSE 76
Query: 269 DLQMNWIDKRLSWN 310
+ + W D L WN
Sbjct: 77 EFLLRWYDPILHWN 90
>AF016664-8|AAY44018.1| 397|Caenorhabditis elegans Hypothetical
protein D2062.12 protein.
Length = 397
Score = 29.1 bits (62), Expect = 4.1
Identities = 10/38 (26%), Positives = 21/38 (55%), Gaps = 1/38 (2%)
Frame = +2
Query: 212 LHLRHAN-IRESESTVRIQADLQMNWIDKRLSWNAGEW 322
LH+ H + I++ + +++ W+D+RL WN +
Sbjct: 62 LHVDHIHDIQDEQGVLKMALTFTFTWMDERLMWNPSNY 99
>AC024817-27|AAY86296.1| 636|Caenorhabditis elegans Hypothetical
protein Y54G2A.40 protein.
Length = 636
Score = 29.1 bits (62), Expect = 4.1
Identities = 24/80 (30%), Positives = 38/80 (47%), Gaps = 1/80 (1%)
Frame = +2
Query: 185 DSKIVVNLTLHLRHANIR-ESESTVRIQADLQMNWIDKRLSWNAGEWGCSTWLVSSGTLV 361
D +I V L LR + +R ++ES + +++ + K L W CS + L
Sbjct: 456 DLEICVYCELVLRRSVLRTDAESPDNFKKGMKIRFNYKWLGGLPLRWQCSDCV---DRLF 512
Query: 362 EA*RGTAKRGCNHRRGLRSP 421
+ +G K+GCNH RSP
Sbjct: 513 KEDQGAWKQGCNHFLQRRSP 532
>AC006808-1|AAF60813.1| 486|Caenorhabditis elegans Hypothetical
protein Y58G8A.1 protein.
Length = 486
Score = 29.1 bits (62), Expect = 4.1
Identities = 15/54 (27%), Positives = 24/54 (44%), Gaps = 1/54 (1%)
Frame = +2
Query: 200 VNLTLHLRHAN-IRESESTVRIQADLQMNWIDKRLSWNAGEWGCSTWLVSSGTL 358
V + L++ H + E E T + L +W D+ L W ST ++S L
Sbjct: 54 VAVYLNIAHVEKVDEHEQTALVHGHLMASWTDEYLKWERKATNISTLSIASSKL 107
>AF038606-6|AAB92023.2| 464|Caenorhabditis elegans Hypothetical
protein C04C3.2 protein.
Length = 464
Score = 28.7 bits (61), Expect = 5.5
Identities = 18/79 (22%), Positives = 38/79 (48%), Gaps = 5/79 (6%)
Frame = +2
Query: 140 MIDSLLATYDRDSPPDSK----IVVNLTLHLRH-ANIRESESTVRIQADLQMNWIDKRLS 304
+I+++ YD+ P ++ ++V++T+ L +RE++ W D +L+
Sbjct: 44 LIETIQRRYDKRVRPFAESNRPVIVHMTIVLGILTEVRENQQVASFVISHVQKWRDPKLA 103
Query: 305 WNAGEWGCSTWLVSSGTLV 361
WN + T +V +LV
Sbjct: 104 WNPADHSGLTQVVMPRSLV 122
>Z67737-3|CAA91538.2| 399|Caenorhabditis elegans Hypothetical
protein T01H10.3 protein.
Length = 399
Score = 28.3 bits (60), Expect = 7.2
Identities = 13/53 (24%), Positives = 25/53 (47%)
Frame = +2
Query: 164 YDRDSPPDSKIVVNLTLHLRHANIRESESTVRIQADLQMNWIDKRLSWNAGEW 322
+D D+P + L L+ + E + V + ++ W D RL+WN ++
Sbjct: 65 HDPDAPGRWNYTL-LLFSLKLVEVTEPQEKVSVVMEVMEYWFDARLTWNKEDY 116
>AC084197-42|AAU87806.2| 544|Caenorhabditis elegans Acetylcholine
receptor protein 25 protein.
Length = 544
Score = 28.3 bits (60), Expect = 7.2
Identities = 12/45 (26%), Positives = 24/45 (53%), Gaps = 1/45 (2%)
Frame = +2
Query: 194 IVVNLTLHLRH-ANIRESESTVRIQADLQMNWIDKRLSWNAGEWG 325
++V + L L+ ++ E V + A L+ +W+D L W ++G
Sbjct: 51 VMVKMGLVLQQIVDVDEKNQVVDVNAWLKFSWVDYSLKWKPEDYG 95
Score = 27.9 bits (59), Expect = 9.5
Identities = 14/35 (40%), Positives = 19/35 (54%), Gaps = 1/35 (2%)
Frame = +3
Query: 354 RLWRPDVVLLNAAATTAGD-YALRARVSNNGSVSW 455
+LW PDV++ N+A YA V NG V+W
Sbjct: 106 QLWTPDVLMYNSADPQFDSRYASNLLVYPNGLVNW 140
>Z83104-2|CAB54203.1| 563|Caenorhabditis elegans Hypothetical
protein F09B12.1b protein.
Length = 563
Score = 27.9 bits (59), Expect = 9.5
Identities = 13/30 (43%), Positives = 18/30 (60%)
Frame = +1
Query: 124 NITVPHDRLAPRNVRSGLPPRLQNRSQPDP 213
N+ P D+L + SG+P +LQNR P P
Sbjct: 114 NVPPPDDQL-DWQIASGVPVQLQNRGVPQP 142
>Z83104-1|CAB54204.1| 573|Caenorhabditis elegans Hypothetical
protein F09B12.1a protein.
Length = 573
Score = 27.9 bits (59), Expect = 9.5
Identities = 13/30 (43%), Positives = 18/30 (60%)
Frame = +1
Query: 124 NITVPHDRLAPRNVRSGLPPRLQNRSQPDP 213
N+ P D+L + SG+P +LQNR P P
Sbjct: 124 NVPPPDDQL-DWQIASGVPVQLQNRGVPQP 152
>Z70205-8|CAO78730.1| 270|Caenorhabditis elegans Hypothetical
protein C11H1.4b protein.
Length = 270
Score = 27.9 bits (59), Expect = 9.5
Identities = 16/57 (28%), Positives = 26/57 (45%)
Frame = -1
Query: 313 CVPTQSFVDPIHLKICLYSHGGLGLTNVSMSQMQGQVDYDFGVGGGVPIVRCEERVD 143
C P F D + H G+T+ ++Q+ ++D G GV I+ C R+D
Sbjct: 94 CAPCILFFDELDSLAPKRGHDSTGVTDRVVNQLLTELDGAEGGMKGVIILGCTSRID 150
>Z70205-7|CAA94120.2| 996|Caenorhabditis elegans Hypothetical
protein C11H1.4a protein.
Length = 996
Score = 27.9 bits (59), Expect = 9.5
Identities = 16/57 (28%), Positives = 26/57 (45%)
Frame = -1
Query: 313 CVPTQSFVDPIHLKICLYSHGGLGLTNVSMSQMQGQVDYDFGVGGGVPIVRCEERVD 143
C P F D + H G+T+ ++Q+ ++D G GV I+ C R+D
Sbjct: 820 CAPCILFFDELDSLAPKRGHDSTGVTDRVVNQLLTELDGAEGGMKGVIILGCTSRID 876
>Z67735-2|CAA91530.2| 403|Caenorhabditis elegans Hypothetical
protein C15A7.1 protein.
Length = 403
Score = 27.9 bits (59), Expect = 9.5
Identities = 12/60 (20%), Positives = 26/60 (43%), Gaps = 1/60 (1%)
Frame = +2
Query: 146 DSLLATYDRDSPPDSKIVVNLTLHLRH-ANIRESESTVRIQADLQMNWIDKRLSWNAGEW 322
+ +L D P + + + L L H + + E + + ++ W D+RL W+ +
Sbjct: 39 EDVLGPLDGSMPSELPVFIGAQLKLDHISRVDEKTGFLTLALTVKFMWSDERLQWDPSHY 98
>U88167-6|AAB42223.1| 461|Caenorhabditis elegans Acetylcholine
receptor protein 11 protein.
Length = 461
Score = 27.9 bits (59), Expect = 9.5
Identities = 17/76 (22%), Positives = 32/76 (42%), Gaps = 5/76 (6%)
Frame = +2
Query: 113 CENATSLSLMIDSLLATYDRDSPP----DSKIVVNLTLHLRHA-NIRESESTVRIQADLQ 277
C+ + + + + LL Y+ P + V + L L+ ++ E V + A L
Sbjct: 20 CDGSVAETKLFTDLLKGYNPLERPVQNSSQPLEVKIKLFLQQILDVDEKNQIVSVNAWLS 79
Query: 278 MNWIDKRLSWNAGEWG 325
W D +L W ++G
Sbjct: 80 YTWFDHKLQWEPKKYG 95
>AL110490-4|CAB54450.1| 474|Caenorhabditis elegans Hypothetical
protein Y48B6A.4 protein.
Length = 474
Score = 27.9 bits (59), Expect = 9.5
Identities = 13/36 (36%), Positives = 20/36 (55%), Gaps = 1/36 (2%)
Frame = +3
Query: 345 PRERLWRPDVVLLNAA-ATTAGDYALRARVSNNGSV 449
P LW+PD++L N+A + + VS+NG V
Sbjct: 102 PHGTLWKPDILLFNSANEHFDASFPVHMVVSSNGDV 137
>AF101309-5|ABD94097.1| 543|Caenorhabditis elegans Hypothetical
protein H24G06.1e protein.
Length = 543
Score = 27.9 bits (59), Expect = 9.5
Identities = 14/41 (34%), Positives = 20/41 (48%)
Frame = -3
Query: 365 PPQAFPRTPAKCCSPTPLRSNSVVCRSNSFEDLPVFARWTR 243
PP PRT ++ S P RSNS + + + E P +R
Sbjct: 31 PPPLAPRTTSRVLSTAPRRSNSNLFAATNLEVPPTSTNLSR 71
>AF016674-6|AAB66129.1| 530|Caenorhabditis elegans Hypothetical
protein C03H5.6 protein.
Length = 530
Score = 27.9 bits (59), Expect = 9.5
Identities = 21/82 (25%), Positives = 32/82 (39%), Gaps = 1/82 (1%)
Frame = +1
Query: 283 LDRQTTELERRGVGLQHLAGV-LGNACGGLTWYC*TRLQPPPGTTLSAPVYLITXPSPGX 459
+DR L+ G+ H + + N CG +TW C P T S+ L+ P+
Sbjct: 310 MDRLGVLLDNPGLQTHHCSRCKVTNTCGAVTWMC------PSCKTYSSDTTLMKNPNNVT 363
Query: 460 RAWTXALQFLCXXTXWPHXLQT 525
T Q T W + + T
Sbjct: 364 TGTTTVTQGYGSGTAWKNLIFT 385
>AB054992-1|BAB62002.1| 996|Caenorhabditis elegans peroxin protein.
Length = 996
Score = 27.9 bits (59), Expect = 9.5
Identities = 16/57 (28%), Positives = 26/57 (45%)
Frame = -1
Query: 313 CVPTQSFVDPIHLKICLYSHGGLGLTNVSMSQMQGQVDYDFGVGGGVPIVRCEERVD 143
C P F D + H G+T+ ++Q+ ++D G GV I+ C R+D
Sbjct: 820 CAPCILFFDELDSLAPKRGHDSTGVTDRVVNQLLTELDGAEGGMKGVIILGCTSRID 876
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,348,541
Number of Sequences: 27780
Number of extensions: 281524
Number of successful extensions: 998
Number of sequences better than 10.0: 63
Number of HSP's better than 10.0 without gapping: 905
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 994
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2087513582
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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