Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP11_FL5_O23
(864 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY540846-1|AAS48080.1| 541|Apis mellifera neuronal nicotinic ac... 52 9e-09
DQ026032-1|AAY87891.1| 566|Apis mellifera nicotinic acetylcholi... 47 2e-07
DQ026031-1|AAY87890.1| 601|Apis mellifera nicotinic acetylcholi... 47 2e-07
AF514804-1|AAM51823.1| 537|Apis mellifera neuronal nicotinic ac... 46 3e-07
DQ026033-1|AAY87892.1| 569|Apis mellifera nicotinic acetylcholi... 46 6e-07
DQ026039-1|AAY87898.1| 427|Apis mellifera nicotinic acetylcholi... 45 8e-07
DQ026036-1|AAY87895.1| 529|Apis mellifera nicotinic acetylcholi... 45 1e-06
DQ026035-1|AAY87894.1| 529|Apis mellifera nicotinic acetylcholi... 45 1e-06
EF127805-1|ABL67942.1| 461|Apis mellifera nicotinic acetylcholi... 44 2e-06
EF127804-1|ABL67941.1| 461|Apis mellifera nicotinic acetylcholi... 44 2e-06
EF127803-1|ABL67940.1| 461|Apis mellifera nicotinic acetylcholi... 44 2e-06
EF127802-1|ABL67939.1| 461|Apis mellifera nicotinic acetylcholi... 44 2e-06
EF127801-1|ABL67938.1| 461|Apis mellifera nicotinic acetylcholi... 44 2e-06
EF127800-1|ABL67937.1| 461|Apis mellifera nicotinic acetylcholi... 44 2e-06
AY569781-1|AAS75781.1| 461|Apis mellifera neuronal nicotinic ac... 43 3e-06
AY500239-1|AAR92109.1| 555|Apis mellifera neuronal nicotinic ac... 43 3e-06
DQ667183-1|ABG75735.1| 463|Apis mellifera GABA-gated ion channe... 43 4e-06
DQ026034-1|AAY87893.1| 569|Apis mellifera nicotinic acetylcholi... 42 6e-06
DQ026038-1|AAY87897.1| 520|Apis mellifera nicotinic acetylcholi... 40 2e-05
DQ667193-1|ABG75745.1| 510|Apis mellifera cys-loop ligand-gated... 37 2e-04
DQ667182-1|ABG75734.1| 445|Apis mellifera GABA-gated chloride c... 37 2e-04
DQ667181-1|ABG75733.1| 445|Apis mellifera GABA-gated chloride c... 36 5e-04
DQ026037-1|AAY87896.1| 431|Apis mellifera nicotinic acetylcholi... 28 0.13
DQ667187-1|ABG75739.1| 428|Apis mellifera histamine-gated chlor... 24 0.50
DQ667188-1|ABG75740.1| 383|Apis mellifera histamine-gated chlor... 25 0.68
AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor pr... 23 2.7
AB270697-1|BAF75928.1| 735|Apis mellifera FoxP protein protein. 23 2.7
AB161182-1|BAD08344.1| 1040|Apis mellifera metabotropic glutamat... 23 3.6
DQ667195-1|ABG75747.1| 469|Apis mellifera cys-loop ligand-gated... 22 6.3
>AY540846-1|AAS48080.1| 541|Apis mellifera neuronal nicotinic
acetylcholine receptorApisa2 subunit protein.
Length = 541
Score = 51.6 bits (118), Expect = 9e-09
Identities = 41/129 (31%), Positives = 58/129 (44%), Gaps = 9/129 (6%)
Frame = +3
Query: 63 IASAAECENATSLSLMIDSLLATYDRESPPDSK----IVVNLTLHLRHA---NIRESEST 221
I SA C + D LL+ Y+R P S +VV L L L N+++ T
Sbjct: 9 ILSARICHGNPDAKRLYDDLLSNYNRLIRPVSNNNDTVVVKLGLRLSQLIDLNLKDQILT 68
Query: 222 VRILADLQMNWIDKRLSWNAGEWGCSTWL-VSSERLWRPDVVLLNAAATTAGDYAL-RAR 395
+ L+ W D + W+ E+G T L V SE +W PD+VL N A G + +A
Sbjct: 69 TNVW--LEHEWQDHKFQWDPAEYGGVTELYVPSEHIWLPDIVLYNNADGEYGVTTMTKAI 126
Query: 396 VSNXGSVSW 422
+ G V W
Sbjct: 127 LHYTGKVLW 135
Score = 23.8 bits (49), Expect = 2.1
Identities = 9/14 (64%), Positives = 10/14 (71%)
Frame = +1
Query: 472 WPNDMQTCTFKFGS 513
+P D QTC KFGS
Sbjct: 152 FPFDQQTCFMKFGS 165
>DQ026032-1|AAY87891.1| 566|Apis mellifera nicotinic acetylcholine
receptor alpha3subunit protein.
Length = 566
Score = 47.2 bits (107), Expect = 2e-07
Identities = 32/123 (26%), Positives = 55/123 (44%), Gaps = 9/123 (7%)
Frame = +3
Query: 81 CENATSLSLMIDSLLATYDRESPPDSKIVVNLTLHLR-------HANIRESESTVRILAD 239
C + D LL+ Y++ P + LT+ ++ N++ T +
Sbjct: 19 CSGNPDAKRLYDDLLSNYNKLVRPVVNVTDALTVKIKLKLSQLIDVNLKNQIMTTNLW-- 76
Query: 240 LQMNWIDKRLSWNAGEWGCSTWL-VSSERLWRPDVVLL-NAAATTAGDYALRARVSNXGS 413
++ +W D +L W+ E+G L V S+ +WRPD+VL NA A +A ++ G
Sbjct: 77 VEQSWYDYKLKWDPKEYGGVEMLHVPSDHIWRPDIVLYNNADGNFEVTLATKATLNYTGR 136
Query: 414 VSW 422
V W
Sbjct: 137 VEW 139
Score = 23.8 bits (49), Expect = 2.1
Identities = 9/14 (64%), Positives = 10/14 (71%)
Frame = +1
Query: 472 WPNDMQTCTFKFGS 513
+P D QTC KFGS
Sbjct: 156 FPFDEQTCVMKFGS 169
>DQ026031-1|AAY87890.1| 601|Apis mellifera nicotinic acetylcholine
receptor alpha1subunit protein.
Length = 601
Score = 47.2 bits (107), Expect = 2e-07
Identities = 36/136 (26%), Positives = 61/136 (44%), Gaps = 12/136 (8%)
Frame = +3
Query: 51 LTCAIASAAECENATSLSLMIDSLLATYDRESPP----DSKIVVNLTLHLRH---ANIRE 209
++C +A + + D LL+ Y+R P ++ V + L L N++
Sbjct: 5 ISCLVAPFPGASANSEAKRLYDDLLSNYNRLIRPVGNNSDRLTVKMGLRLSQLIDVNLKN 64
Query: 210 SESTVRILADLQMNWIDKRLSWNAGEWG-CSTWLVSSERLWRPDVVLLNAAATTAGDYAL 386
T + ++ W D +L WN ++G T V SE +W PD+VL N A G+Y +
Sbjct: 65 QIMTTNVW--VEQEWNDYKLKWNPDDYGGVDTLHVPSEHIWLPDIVLYNNA---DGNYEV 119
Query: 387 ----RARVSNXGSVSW 422
+A + + G V W
Sbjct: 120 TIMTKAILHHTGKVVW 135
Score = 23.0 bits (47), Expect = 3.6
Identities = 9/14 (64%), Positives = 10/14 (71%)
Frame = +1
Query: 472 WPNDMQTCTFKFGS 513
+P D QTC KFGS
Sbjct: 152 FPFDEQTCFMKFGS 165
>AF514804-1|AAM51823.1| 537|Apis mellifera neuronal nicotinic
acetylcholine receptoralpha-3 protein.
Length = 537
Score = 46.4 bits (105), Expect = 3e-07
Identities = 36/115 (31%), Positives = 55/115 (47%), Gaps = 10/115 (8%)
Frame = +3
Query: 108 MIDSLLATYDRESPPDSKIVVNLT--LHLRHANIRESESTVRILAD---LQMNWIDKRLS 272
+ D LL+ Y+R P LT L L+ + + E +++ ++ W D +L
Sbjct: 37 LYDDLLSNYNRLIRPVMNNTETLTVQLGLKLSQLIEMNLKNQVMTTNVWVEQRWNDYKLK 96
Query: 273 WNAGEWGCSTWL-VSSERLWRPDVVLLNAAATTAGDYAL----RARVSNXGSVSW 422
WN E+G L V SE +W PD+VL N A G+Y + +A + G VSW
Sbjct: 97 WNPEEYGGVEMLYVPSENIWLPDIVLYNNA---DGNYEVTLMTKATLKYTGDVSW 148
Score = 23.4 bits (48), Expect = 2.7
Identities = 9/18 (50%), Positives = 12/18 (66%)
Frame = +1
Query: 472 WPNDMQTCTFKFGSRMHN 525
+P D Q+C KFGS +N
Sbjct: 165 FPFDEQSCIMKFGSWTYN 182
>DQ026033-1|AAY87892.1| 569|Apis mellifera nicotinic acetylcholine
receptor alpha4subunit protein.
Length = 569
Score = 45.6 bits (103), Expect = 6e-07
Identities = 30/112 (26%), Positives = 56/112 (50%), Gaps = 7/112 (6%)
Frame = +3
Query: 108 MIDSLLATYDRESPP--DSKIVVNLTLHLRHANIRESESTVRILAD---LQMNWIDKRLS 272
+ D LL+ Y++ P ++ V+ + + L+ + + + +I+ ++ +W D +L
Sbjct: 32 LYDDLLSNYNKLVRPVVNTSDVLRVCIKLKLSQLIDVNLKNQIMTTNLWVEQSWYDYKLR 91
Query: 273 WNAGEWGCSTWL-VSSERLWRPDVVLL-NAAATTAGDYALRARVSNXGSVSW 422
W E+G L V S+ +WRPD+VL NA A +A + + G V W
Sbjct: 92 WEPKEYGGVKMLHVPSDHIWRPDIVLYNNADGNFEVTLATKATIYHQGLVEW 143
Score = 23.8 bits (49), Expect = 2.1
Identities = 9/14 (64%), Positives = 10/14 (71%)
Frame = +1
Query: 472 WPNDMQTCTFKFGS 513
+P D QTC KFGS
Sbjct: 160 FPFDEQTCVLKFGS 173
>DQ026039-1|AAY87898.1| 427|Apis mellifera nicotinic acetylcholine
receptor beta2subunit protein.
Length = 427
Score = 45.2 bits (102), Expect = 8e-07
Identities = 27/95 (28%), Positives = 47/95 (49%), Gaps = 6/95 (6%)
Frame = +3
Query: 81 CENATSLSLMIDS---LLATYDRESPPDSKIV--VNLTLHLRHANIRESESTVRILADLQ 245
C++ TS S + L YDR+ P+ K ++ L ++H N+ E TV L+
Sbjct: 28 CKDITSTSALYRLKLYLFCDYDRDIIPEQKNATKIDFGLSIQHYNVDEYSHTVDFHVMLK 87
Query: 246 MNWIDKRLSWNAGEW-GCSTWLVSSERLWRPDVVL 347
+ W L+W + E+ ++ V S +W PD+V+
Sbjct: 88 LMWEQSHLTWKSSEFDSINSIRVKSYEIWVPDIVM 122
Score = 25.8 bits (54), Expect = 0.52
Identities = 11/28 (39%), Positives = 14/28 (50%), Gaps = 2/28 (7%)
Frame = +1
Query: 457 CRXDN--WPNDMQTCTFKFGSRMHNSDE 534
C D+ WP D+ CT S H S+E
Sbjct: 159 CEYDHTWWPYDILNCTIHIASWSHGSNE 186
>DQ026036-1|AAY87895.1| 529|Apis mellifera nicotinic acetylcholine
receptor alpha6subunit protein.
Length = 529
Score = 44.8 bits (101), Expect = 1e-06
Identities = 27/113 (23%), Positives = 55/113 (48%), Gaps = 7/113 (6%)
Frame = +3
Query: 108 MIDSLLATYDRESPP----DSKIVVNLTLHLRHA-NIRESESTVRILADLQMNWIDKRLS 272
+++ LL++Y+ P + V + L+ ++ E + A L++ W+D L
Sbjct: 58 LLNELLSSYNTLERPVANESEPLEVKFGITLQQIIDVDEKNQILTTNAWLKLEWVDYNLQ 117
Query: 273 WNAGEW-GCSTWLVSSERLWRPDVVLLNAA-ATTAGDYALRARVSNXGSVSWI 425
WN E+ G ++ +LW+PD+++ N+A G Y V++ GS ++
Sbjct: 118 WNESEYGGVKDLRITPNKLWKPDILMYNSADEGFDGTYQTNVVVTHNGSCLYV 170
Score = 22.6 bits (46), Expect = 4.8
Identities = 11/28 (39%), Positives = 16/28 (57%), Gaps = 2/28 (7%)
Frame = +1
Query: 457 CRXD-NW-PNDMQTCTFKFGSRMHNSDE 534
C+ D W P D Q C KFGS ++ ++
Sbjct: 179 CKIDITWFPFDDQHCDMKFGSWTYDGNQ 206
>DQ026035-1|AAY87894.1| 529|Apis mellifera nicotinic acetylcholine
receptor alpha6subunit protein.
Length = 529
Score = 44.8 bits (101), Expect = 1e-06
Identities = 27/113 (23%), Positives = 55/113 (48%), Gaps = 7/113 (6%)
Frame = +3
Query: 108 MIDSLLATYDRESPP----DSKIVVNLTLHLRHA-NIRESESTVRILADLQMNWIDKRLS 272
+++ LL++Y+ P + V + L+ ++ E + A L++ W+D L
Sbjct: 58 LLNELLSSYNTLERPVANESEPLEVKFGITLQQIIDVDEKNQILTTNAWLKLEWVDYNLQ 117
Query: 273 WNAGEW-GCSTWLVSSERLWRPDVVLLNAA-ATTAGDYALRARVSNXGSVSWI 425
WN E+ G ++ +LW+PD+++ N+A G Y V++ GS ++
Sbjct: 118 WNESEYGGVKDLRITPNKLWKPDILMYNSADEGFDGTYQTNVVVTHNGSCLYV 170
Score = 22.6 bits (46), Expect = 4.8
Identities = 11/28 (39%), Positives = 16/28 (57%), Gaps = 2/28 (7%)
Frame = +1
Query: 457 CRXD-NW-PNDMQTCTFKFGSRMHNSDE 534
C+ D W P D Q C KFGS ++ ++
Sbjct: 179 CKIDITWFPFDDQHCDMKFGSWTYDGNQ 206
>EF127805-1|ABL67942.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 6 protein.
Length = 461
Score = 44.0 bits (99), Expect = 2e-06
Identities = 21/78 (26%), Positives = 40/78 (51%), Gaps = 2/78 (2%)
Frame = +3
Query: 198 NIRESESTVRILADLQMNWIDKRLSWNAGEW-GCSTWLVSSERLWRPDVVLLNAA-ATTA 371
++ E + A L++ W+D L WN E+ G ++ +LW+PD+++ N+A
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSADEGFD 84
Query: 372 GDYALRARVSNXGSVSWI 425
G Y V++ GS ++
Sbjct: 85 GTYQTSVVVTHDGSCLYV 102
Score = 21.8 bits (44), Expect = 8.4
Identities = 11/28 (39%), Positives = 16/28 (57%), Gaps = 2/28 (7%)
Frame = +1
Query: 457 CRXD-NW-PNDMQTCTFKFGSRMHNSDE 534
C+ D W P D Q C KFGS ++ ++
Sbjct: 111 CKMDVAWFPFDDQHCDMKFGSWTYDGNQ 138
>EF127804-1|ABL67941.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 5 protein.
Length = 461
Score = 44.0 bits (99), Expect = 2e-06
Identities = 21/78 (26%), Positives = 40/78 (51%), Gaps = 2/78 (2%)
Frame = +3
Query: 198 NIRESESTVRILADLQMNWIDKRLSWNAGEW-GCSTWLVSSERLWRPDVVLLNAA-ATTA 371
++ E + A L++ W+D L WN E+ G ++ +LW+PD+++ N+A
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSADEGFD 84
Query: 372 GDYALRARVSNXGSVSWI 425
G Y V++ GS ++
Sbjct: 85 GTYQTSVVVTHDGSCLYV 102
Score = 21.8 bits (44), Expect = 8.4
Identities = 11/28 (39%), Positives = 16/28 (57%), Gaps = 2/28 (7%)
Frame = +1
Query: 457 CRXD-NW-PNDMQTCTFKFGSRMHNSDE 534
C+ D W P D Q C KFGS ++ ++
Sbjct: 111 CKIDIAWFPFDDQHCDMKFGSWTYDGNQ 138
>EF127803-1|ABL67940.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 4 protein.
Length = 461
Score = 44.0 bits (99), Expect = 2e-06
Identities = 21/78 (26%), Positives = 40/78 (51%), Gaps = 2/78 (2%)
Frame = +3
Query: 198 NIRESESTVRILADLQMNWIDKRLSWNAGEW-GCSTWLVSSERLWRPDVVLLNAA-ATTA 371
++ E + A L++ W+D L WN E+ G ++ +LW+PD+++ N+A
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSADEGFD 84
Query: 372 GDYALRARVSNXGSVSWI 425
G Y V++ GS ++
Sbjct: 85 GTYQTSVVVTHDGSCLYV 102
Score = 22.6 bits (46), Expect = 4.8
Identities = 11/28 (39%), Positives = 16/28 (57%), Gaps = 2/28 (7%)
Frame = +1
Query: 457 CRXD-NW-PNDMQTCTFKFGSRMHNSDE 534
C+ D W P D Q C KFGS ++ ++
Sbjct: 111 CKIDITWFPFDDQHCDMKFGSWTYDGNQ 138
>EF127802-1|ABL67939.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 3 protein.
Length = 461
Score = 44.0 bits (99), Expect = 2e-06
Identities = 21/78 (26%), Positives = 40/78 (51%), Gaps = 2/78 (2%)
Frame = +3
Query: 198 NIRESESTVRILADLQMNWIDKRLSWNAGEW-GCSTWLVSSERLWRPDVVLLNAA-ATTA 371
++ E + A L++ W+D L WN E+ G ++ +LW+PD+++ N+A
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSADEGFD 84
Query: 372 GDYALRARVSNXGSVSWI 425
G Y V++ GS ++
Sbjct: 85 GTYQTSVVVTHDGSCLYV 102
Score = 21.8 bits (44), Expect = 8.4
Identities = 11/28 (39%), Positives = 16/28 (57%), Gaps = 2/28 (7%)
Frame = +1
Query: 457 CRXD-NW-PNDMQTCTFKFGSRMHNSDE 534
C+ D W P D Q C KFGS ++ ++
Sbjct: 111 CKIDIAWFPFDDQHCDMKFGSWTYDGNQ 138
>EF127801-1|ABL67938.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 2 protein.
Length = 461
Score = 44.0 bits (99), Expect = 2e-06
Identities = 21/78 (26%), Positives = 40/78 (51%), Gaps = 2/78 (2%)
Frame = +3
Query: 198 NIRESESTVRILADLQMNWIDKRLSWNAGEW-GCSTWLVSSERLWRPDVVLLNAA-ATTA 371
++ E + A L++ W+D L WN E+ G ++ +LW+PD+++ N+A
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSADEGFD 84
Query: 372 GDYALRARVSNXGSVSWI 425
G Y V++ GS ++
Sbjct: 85 GTYQTSVVVTHDGSCLYV 102
Score = 21.8 bits (44), Expect = 8.4
Identities = 11/28 (39%), Positives = 16/28 (57%), Gaps = 2/28 (7%)
Frame = +1
Query: 457 CRXD-NW-PNDMQTCTFKFGSRMHNSDE 534
C+ D W P D Q C KFGS ++ ++
Sbjct: 111 CKMDIAWFPFDDQHCDMKFGSWTYDGNQ 138
>EF127800-1|ABL67937.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 1 protein.
Length = 461
Score = 44.0 bits (99), Expect = 2e-06
Identities = 21/78 (26%), Positives = 40/78 (51%), Gaps = 2/78 (2%)
Frame = +3
Query: 198 NIRESESTVRILADLQMNWIDKRLSWNAGEW-GCSTWLVSSERLWRPDVVLLNAA-ATTA 371
++ E + A L++ W+D L WN E+ G ++ +LW+PD+++ N+A
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSADEGFD 84
Query: 372 GDYALRARVSNXGSVSWI 425
G Y V++ GS ++
Sbjct: 85 GTYQTSVVVTHNGSCLYV 102
Score = 22.6 bits (46), Expect = 4.8
Identities = 11/28 (39%), Positives = 16/28 (57%), Gaps = 2/28 (7%)
Frame = +1
Query: 457 CRXD-NW-PNDMQTCTFKFGSRMHNSDE 534
C+ D W P D Q C KFGS ++ ++
Sbjct: 111 CKIDITWFPFDDQHCDMKFGSWTYDGNQ 138
>AY569781-1|AAS75781.1| 461|Apis mellifera neuronal nicotinic
acetylcholine Apisa7-2 subunit protein.
Length = 461
Score = 43.2 bits (97), Expect = 3e-06
Identities = 27/91 (29%), Positives = 39/91 (42%), Gaps = 3/91 (3%)
Frame = +3
Query: 162 IVVNLTLHLRHANIRESESTVRILADLQMNWIDKRLSWNAGEW-GCSTWLVSSERLWRPD 338
+V L+LH ++ E + + W D L WNA E+ G V R+WRPD
Sbjct: 33 VVFGLSLH-HIIDVDEKNQILTTNCWVTQIWTDHHLKWNASEFAGIRVIRVPYNRVWRPD 91
Query: 339 VVLLNAAATTAGDYALRAR--VSNXGSVSWI 425
+L N A + VS+ G V W+
Sbjct: 92 TILYNNADPQYSSAVINTNVIVSHTGEVVWL 122
>AY500239-1|AAR92109.1| 555|Apis mellifera neuronal nicotinic
acetylcholine receptoralpha7-1 protein.
Length = 555
Score = 43.2 bits (97), Expect = 3e-06
Identities = 37/137 (27%), Positives = 64/137 (46%), Gaps = 9/137 (6%)
Frame = +3
Query: 42 RFLLTCAIASAAE--CENATSLSLMIDSLLATYD-RESPPDSK---IVVNLTLHLRHA-N 200
R+ L AIA AA + +++ LL TY+ E P ++ +V++ L L +
Sbjct: 3 RWTLMAAIALAASGLVNGGSHEKRLLNDLLDTYNVLERPVGNESEPLVLSFGLTLMQIID 62
Query: 201 IRESESTVRILADLQMNWIDKRLSWNAGEWGCSTWL-VSSERLWRPDVVLLNAA-ATTAG 374
+ E + L++ W D + WN ++G L + RLW+PDV++ N+A G
Sbjct: 63 VDEKNQLLITNLWLKLEWNDVNMRWNVSDYGGVRDLRIPPHRLWKPDVLMYNSADEGFDG 122
Query: 375 DYALRARVSNXGSVSWI 425
Y V N G+ ++
Sbjct: 123 TYPTNVVVKNNGTCLYV 139
Score = 22.2 bits (45), Expect = 6.3
Identities = 11/21 (52%), Positives = 12/21 (57%), Gaps = 2/21 (9%)
Frame = +1
Query: 457 CRXD-NW-PNDMQTCTFKFGS 513
C+ D W P D Q C KFGS
Sbjct: 148 CKIDITWFPFDDQRCEMKFGS 168
>DQ667183-1|ABG75735.1| 463|Apis mellifera GABA-gated ion channel
protein.
Length = 463
Score = 42.7 bits (96), Expect = 4e-06
Identities = 24/93 (25%), Positives = 46/93 (49%), Gaps = 4/93 (4%)
Frame = +3
Query: 87 NATSLSLMIDSLLATYDRESPPD---SKIVVNLTLHLRHAN-IRESESTVRILADLQMNW 254
N +++S ++D+LL YD PD V + + +R I E + T + + +W
Sbjct: 2 NHSNISELLDNLLRGYDNSVRPDFGGPPATVEVDIMVRSMGPISEVDMTYSMDCYFRQSW 61
Query: 255 IDKRLSWNAGEWGCSTWLVSSERLWRPDVVLLN 353
+D+RL++ G+ + + R+W+PD N
Sbjct: 62 VDRRLAFQGGKETLALSISMLARIWKPDTYFYN 94
Score = 23.4 bits (48), Expect = 2.7
Identities = 8/16 (50%), Positives = 11/16 (68%)
Frame = +1
Query: 466 DNWPNDMQTCTFKFGS 513
+N+P D Q C +FGS
Sbjct: 135 ENFPMDTQRCPLQFGS 150
>DQ026034-1|AAY87893.1| 569|Apis mellifera nicotinic acetylcholine
receptor alpha4subunit protein.
Length = 569
Score = 42.3 bits (95), Expect = 6e-06
Identities = 32/115 (27%), Positives = 58/115 (50%), Gaps = 10/115 (8%)
Frame = +3
Query: 108 MIDSLLATYDRESPP--DSKIVVNLTLHLRHANIRESESTVRILAD---LQMNWIDKRLS 272
+ D LL+ Y++ P ++ V+ + + L+ + + + +I+ ++ +W D +L
Sbjct: 32 LYDDLLSNYNKLVRPVVNTSDVLRVCIKLKLSQLIDVNLKNQIMTTNLWVEQSWYDYKLR 91
Query: 273 WNAGEWGCSTWL-VSSERLWRPDVVLLNAAATTAGDYAL----RARVSNXGSVSW 422
W E+G L V S+ +WRPD+VL N A G+Y + +A V G V W
Sbjct: 92 WEPKEYGGVKMLHVPSDHIWRPDIVLYNNA---DGNYEVTLMTKATVYYSGLVVW 143
Score = 23.0 bits (47), Expect = 3.6
Identities = 8/14 (57%), Positives = 10/14 (71%)
Frame = +1
Query: 472 WPNDMQTCTFKFGS 513
+P D+QTC K GS
Sbjct: 160 FPYDVQTCVLKLGS 173
>DQ026038-1|AAY87897.1| 520|Apis mellifera nicotinic acetylcholine
receptor beta1subunit protein.
Length = 520
Score = 40.3 bits (90), Expect = 2e-05
Identities = 25/95 (26%), Positives = 47/95 (49%), Gaps = 6/95 (6%)
Frame = +3
Query: 159 KIVVNLTL-HLRHANIRESESTVRILADLQMNWIDKRLSWNAGEWG-CSTWLVSSERLWR 332
K+ VN L ++ N+ E ++ L+ W D +L W+ ++G + +++W+
Sbjct: 51 KVHVNFGLAFVQLINVNEKNQIMKSNVWLRFIWTDYQLQWDEADYGGIGVLRLPPDKVWK 110
Query: 333 PDVVLLNAAATTAGDYALRAR----VSNXGSVSWI 425
PD+VL N A G+Y +R + + G V W+
Sbjct: 111 PDIVLFNNA---DGNYEVRYKSNVLIYPNGDVLWV 142
Score = 27.9 bits (59), Expect = 0.13
Identities = 11/21 (52%), Positives = 13/21 (61%)
Frame = +1
Query: 472 WPNDMQTCTFKFGSRMHNSDE 534
+P D QTC KFGS N D+
Sbjct: 158 FPFDQQTCIMKFGSWTFNGDQ 178
>DQ667193-1|ABG75745.1| 510|Apis mellifera cys-loop ligand-gated
ion channel subunit protein.
Length = 510
Score = 37.1 bits (82), Expect = 2e-04
Identities = 29/132 (21%), Positives = 55/132 (41%), Gaps = 8/132 (6%)
Frame = +3
Query: 96 SLSLMIDSLLATYDRESPPD----SKIVVNLTLHLRHAN-IRESESTVRILADLQMNWID 260
++++++++LL Y+ P + VV + +R + E + + + +W D
Sbjct: 36 NITMVLENLLMNYENNQLPTHGKGTPTVVKTNILIRSMGPVSELDMDYSMDCYFRQSWRD 95
Query: 261 KRLSWNAGEWGCSTWLVSSERLWRPDVVLLNAAATTAGDYAL---RARVSNXGSVSWIKR 431
RLS+ S + ER+WRPD N + + R+S G + + R
Sbjct: 96 SRLSFLGPIKSLSLSIKMLERIWRPDTYFYNGKHSYVHTITVPNKLLRISQDGDILYSMR 155
Query: 432 LDISTPISMQXR 467
L I M+ R
Sbjct: 156 LTIKAKCPMELR 167
>DQ667182-1|ABG75734.1| 445|Apis mellifera GABA-gated chloride
channel protein.
Length = 445
Score = 37.1 bits (82), Expect = 2e-04
Identities = 35/153 (22%), Positives = 68/153 (44%), Gaps = 13/153 (8%)
Frame = +3
Query: 87 NATSLSLMIDSLLATYDRESPPD---SKIVVNLTLH-LRHANIRESESTVRILADLQMNW 254
N ++S ++DS +YD+ P+ + V +T++ L +++ E + + + W
Sbjct: 8 NDVNISAILDSFSVSYDKRVRPNYGGPPVEVGVTMYVLSISSLSEVKMDFTLDFYFRQFW 67
Query: 255 IDKRLSWNAGEWGCSTWLVSSE---RLWRPDVVLLNA------AATTAGDYALRARVSNX 407
D RL++ G T V SE +W PD +N ATT+ ++ R+ +
Sbjct: 68 TDPRLAFKK-RTGVETLSVGSEFIKNIWVPDTFFVNEKQSYFHIATTSNEF---IRIHHS 123
Query: 408 GSVSWIKRLDISTPISMQXRQLAQRHADLHVQV 506
GS++ RL I+ M + H+++
Sbjct: 124 GSITRSIRLTITASCPMNLQYFPMDRQLCHIEI 156
>DQ667181-1|ABG75733.1| 445|Apis mellifera GABA-gated chloride
channel protein.
Length = 445
Score = 35.9 bits (79), Expect = 5e-04
Identities = 35/153 (22%), Positives = 67/153 (43%), Gaps = 13/153 (8%)
Frame = +3
Query: 87 NATSLSLMIDSLLATYDRESPPD---SKIVVNLTLH-LRHANIRESESTVRILADLQMNW 254
N ++S ++DS +YD+ P+ + V +T++ L +++ E + + W
Sbjct: 8 NDVNISAILDSFSVSYDKRVRPNYGGPPVEVGVTMYVLSISSVSEVLMDFTLDFYFRQFW 67
Query: 255 IDKRLSWNAGEWGCSTWLVSSE---RLWRPDVVLLNA------AATTAGDYALRARVSNX 407
D RL++ G T V SE +W PD +N ATT+ ++ R+ +
Sbjct: 68 TDPRLAFKK-RTGVETLSVGSEFIKNIWVPDTFFVNEKQSYFHIATTSNEF---IRIHHS 123
Query: 408 GSVSWIKRLDISTPISMQXRQLAQRHADLHVQV 506
GS++ RL I+ M + H+++
Sbjct: 124 GSITRSIRLTITASCPMNLQYFPMDRQLCHIEI 156
>DQ026037-1|AAY87896.1| 431|Apis mellifera nicotinic acetylcholine
receptor alpha9subunit protein.
Length = 431
Score = 27.9 bits (59), Expect = 0.13
Identities = 9/22 (40%), Positives = 13/22 (59%)
Frame = +1
Query: 469 NWPNDMQTCTFKFGSRMHNSDE 534
+WP D C FGS +H+ +E
Sbjct: 175 SWPYDTHRCRINFGSWVHSGEE 196
>DQ667187-1|ABG75739.1| 428|Apis mellifera histamine-gated chloride
channel protein.
Length = 428
Score = 24.2 bits (50), Expect = 1.6
Identities = 9/23 (39%), Positives = 13/23 (56%)
Frame = +1
Query: 472 WPNDMQTCTFKFGSRMHNSDEWI 540
+P+D Q C + S H +DE I
Sbjct: 170 YPHDTQECKLQMESLSHTTDEMI 192
Score = 22.6 bits (46), Expect = 4.8
Identities = 7/10 (70%), Positives = 7/10 (70%)
Frame = -3
Query: 688 PPPPPPXPPP 659
PP P P PPP
Sbjct: 338 PPKPAPPPPP 347
Score = 22.6 bits (46), Expect(2) = 0.50
Identities = 7/10 (70%), Positives = 7/10 (70%)
Frame = -3
Query: 688 PPPPPPXPPP 659
P P PP PPP
Sbjct: 339 PKPAPPPPPP 348
Score = 21.4 bits (43), Expect(2) = 0.50
Identities = 7/13 (53%), Positives = 7/13 (53%)
Frame = -3
Query: 685 PPPPPXPPPXXXP 647
P PPP PP P
Sbjct: 341 PAPPPPPPSSSGP 353
>DQ667188-1|ABG75740.1| 383|Apis mellifera histamine-gated chloride
channel protein.
Length = 383
Score = 25.4 bits (53), Expect = 0.68
Identities = 10/38 (26%), Positives = 19/38 (50%)
Frame = +1
Query: 427 SAWTLALQFXCRXDNWPNDMQTCTFKFGSRMHNSDEWI 540
S TL L + +++P+D Q C+ S H + + +
Sbjct: 124 SKLTLVLSCAMKFESYPHDTQICSMMIESLSHTTQDLV 161
>AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor
protein.
Length = 1370
Score = 23.4 bits (48), Expect = 2.7
Identities = 7/8 (87%), Positives = 7/8 (87%)
Frame = -3
Query: 688 PPPPPPXP 665
PPPPPP P
Sbjct: 1355 PPPPPPPP 1362
Score = 23.4 bits (48), Expect = 2.7
Identities = 7/8 (87%), Positives = 7/8 (87%)
Frame = -3
Query: 685 PPPPPXPP 662
PPPPP PP
Sbjct: 1355 PPPPPPPP 1362
Score = 23.4 bits (48), Expect = 2.7
Identities = 7/8 (87%), Positives = 7/8 (87%)
Frame = -3
Query: 682 PPPPXPPP 659
PPPP PPP
Sbjct: 1355 PPPPPPPP 1362
>AB270697-1|BAF75928.1| 735|Apis mellifera FoxP protein protein.
Length = 735
Score = 23.4 bits (48), Expect = 2.7
Identities = 9/22 (40%), Positives = 9/22 (40%)
Frame = -3
Query: 712 PPXXXXXXPPPPPPXPPPXXXP 647
PP PP PP PP P
Sbjct: 39 PPNPSQGPPPGGPPGAPPSQNP 60
Score = 22.2 bits (45), Expect = 6.3
Identities = 9/26 (34%), Positives = 9/26 (34%)
Frame = -3
Query: 724 PXXXPPXXXXXXPPPPPPXPPPXXXP 647
P P PP P PPP P
Sbjct: 27 PHQSPQAPQRGSPPNPSQGPPPGGPP 52
Score = 21.8 bits (44), Expect = 8.4
Identities = 8/14 (57%), Positives = 9/14 (64%)
Frame = -2
Query: 305 PSAAAPFPCVPTQS 264
PSA AP P +P S
Sbjct: 411 PSAGAPMPPIPNMS 424
>AB161182-1|BAD08344.1| 1040|Apis mellifera metabotropic glutamate
receptor protein.
Length = 1040
Score = 23.0 bits (47), Expect = 3.6
Identities = 10/26 (38%), Positives = 13/26 (50%)
Frame = -2
Query: 104 GQ*CCVFAFCRTSYSTSEEKPVTRII 27
G+ CC F T Y + K VT+ I
Sbjct: 602 GEQCCWHCFNCTQYQIRDHKDVTQCI 627
>DQ667195-1|ABG75747.1| 469|Apis mellifera cys-loop ligand-gated
ion channel subunit protein.
Length = 469
Score = 22.2 bits (45), Expect = 6.3
Identities = 9/22 (40%), Positives = 12/22 (54%)
Frame = +1
Query: 460 RXDNWPNDMQTCTFKFGSRMHN 525
R + +P D+Q C F S HN
Sbjct: 145 RLEKFPFDVQECPLIFESWTHN 166
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 198,131
Number of Sequences: 438
Number of extensions: 4892
Number of successful extensions: 90
Number of sequences better than 10.0: 29
Number of HSP's better than 10.0 without gapping: 43
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 69
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 27916710
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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