Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP11_FL5_N07
(786 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ026032-1|AAY87891.1| 566|Apis mellifera nicotinic acetylcholi... 23 2.4
DQ026034-1|AAY87893.1| 569|Apis mellifera nicotinic acetylcholi... 23 4.3
DQ026033-1|AAY87892.1| 569|Apis mellifera nicotinic acetylcholi... 23 4.3
AJ276511-1|CAC06383.1| 352|Apis mellifera Antennapedia protein ... 23 4.3
AF388659-4|AAK71996.1| 1308|Apis mellifera NFRKB-like protein pr... 23 4.3
AF134821-1|AAD40236.1| 226|Apis mellifera hexamerin protein. 22 5.6
EF625897-1|ABR45904.1| 684|Apis mellifera hexamerin protein. 22 7.4
EF591128-1|ABQ59246.1| 684|Apis mellifera hexamerin 70a protein. 22 7.4
DQ863218-1|ABI94394.1| 399|Apis mellifera tyramine receptor pro... 22 7.4
DQ863217-1|ABI94393.1| 399|Apis mellifera tyramine receptor pro... 22 7.4
AJ245824-1|CAB76374.1| 399|Apis mellifera G-protein coupled rec... 22 7.4
>DQ026032-1|AAY87891.1| 566|Apis mellifera nicotinic acetylcholine
receptor alpha3subunit protein.
Length = 566
Score = 23.4 bits (48), Expect = 2.4
Identities = 9/20 (45%), Positives = 11/20 (55%)
Frame = -1
Query: 435 GDVRRLHGAPAHACAPMSRP 376
G R+HG+PA AP P
Sbjct: 439 GSACRIHGSPATTAAPPQLP 458
>DQ026034-1|AAY87893.1| 569|Apis mellifera nicotinic acetylcholine
receptor alpha4subunit protein.
Length = 569
Score = 22.6 bits (46), Expect = 4.3
Identities = 13/41 (31%), Positives = 17/41 (41%), Gaps = 1/41 (2%)
Frame = -2
Query: 464 LTSSRRSKPAAMCGGCTAR-QPMPALPCHGRARRLIVDGSS 345
L+ S + A G C P+P LP H L V G +
Sbjct: 419 LSPSSLADGARFGGSCLIHGPPLPPLPLHTECEDLSVSGEA 459
>DQ026033-1|AAY87892.1| 569|Apis mellifera nicotinic acetylcholine
receptor alpha4subunit protein.
Length = 569
Score = 22.6 bits (46), Expect = 4.3
Identities = 13/41 (31%), Positives = 17/41 (41%), Gaps = 1/41 (2%)
Frame = -2
Query: 464 LTSSRRSKPAAMCGGCTAR-QPMPALPCHGRARRLIVDGSS 345
L+ S + A G C P+P LP H L V G +
Sbjct: 419 LSPSSLADGARFGGSCLIHGPPLPPLPLHTECEDLSVSGEA 459
>AJ276511-1|CAC06383.1| 352|Apis mellifera Antennapedia protein
protein.
Length = 352
Score = 22.6 bits (46), Expect = 4.3
Identities = 8/18 (44%), Positives = 11/18 (61%)
Frame = +1
Query: 616 PIYIWVRELSDAXRGRAT 669
P+Y W+R + RGR T
Sbjct: 259 PLYPWMRSQFERKRGRQT 276
>AF388659-4|AAK71996.1| 1308|Apis mellifera NFRKB-like protein
protein.
Length = 1308
Score = 22.6 bits (46), Expect = 4.3
Identities = 10/19 (52%), Positives = 11/19 (57%)
Frame = -3
Query: 244 PHSAIVGRETGVASLSGPV 188
PH A R G AS+ GPV
Sbjct: 609 PHKAFTYRMHGYASVVGPV 627
Score = 21.4 bits (43), Expect = 9.8
Identities = 10/24 (41%), Positives = 14/24 (58%), Gaps = 1/24 (4%)
Frame = +3
Query: 165 KCSHESIATGPDREAT-PVSRPTI 233
KC E + + PD+E T P + TI
Sbjct: 355 KCEDERVISIPDKEITVPSNEETI 378
>AF134821-1|AAD40236.1| 226|Apis mellifera hexamerin protein.
Length = 226
Score = 22.2 bits (45), Expect = 5.6
Identities = 17/60 (28%), Positives = 24/60 (40%), Gaps = 6/60 (10%)
Frame = -2
Query: 599 FSHCNTYGTGISSGKST*QLNTTLSPRI------AVMCTASWWS*WQVTGRLTSSRRSKP 438
F + + + SG +T + N+ S + A CT WWS T T SKP
Sbjct: 164 FMQMDEFVVNLKSGSNTIERNSHESXFVVPTRVPATCCTTXWWS--XXTVAXTFKYSSKP 221
>EF625897-1|ABR45904.1| 684|Apis mellifera hexamerin protein.
Length = 684
Score = 21.8 bits (44), Expect = 7.4
Identities = 11/36 (30%), Positives = 19/36 (52%)
Frame = -1
Query: 639 LSYPDVDRDVLSLLLPLQHVRHRDIFGKIHLTVEHD 532
L YP + R++ +L H + DIF K L +++
Sbjct: 99 LYYPQLLREMSALFKLFYHAKDFDIFFKTALWAKNN 134
>EF591128-1|ABQ59246.1| 684|Apis mellifera hexamerin 70a protein.
Length = 684
Score = 21.8 bits (44), Expect = 7.4
Identities = 11/36 (30%), Positives = 19/36 (52%)
Frame = -1
Query: 639 LSYPDVDRDVLSLLLPLQHVRHRDIFGKIHLTVEHD 532
L YP + R++ +L H + DIF K L +++
Sbjct: 99 LYYPQLLREMSALFKLFYHAKDFDIFFKTALWAKNN 134
>DQ863218-1|ABI94394.1| 399|Apis mellifera tyramine receptor
protein.
Length = 399
Score = 21.8 bits (44), Expect = 7.4
Identities = 5/11 (45%), Positives = 10/11 (90%)
Frame = -1
Query: 129 LCRMWL*CEII 97
LC++WL C+++
Sbjct: 108 LCKLWLTCDVL 118
>DQ863217-1|ABI94393.1| 399|Apis mellifera tyramine receptor
protein.
Length = 399
Score = 21.8 bits (44), Expect = 7.4
Identities = 5/11 (45%), Positives = 10/11 (90%)
Frame = -1
Query: 129 LCRMWL*CEII 97
LC++WL C+++
Sbjct: 108 LCKLWLTCDVL 118
>AJ245824-1|CAB76374.1| 399|Apis mellifera G-protein coupled
receptor protein.
Length = 399
Score = 21.8 bits (44), Expect = 7.4
Identities = 5/11 (45%), Positives = 10/11 (90%)
Frame = -1
Query: 129 LCRMWL*CEII 97
LC++WL C+++
Sbjct: 108 LCKLWLTCDVL 118
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 226,207
Number of Sequences: 438
Number of extensions: 5221
Number of successful extensions: 17
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 17
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 24760908
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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