Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP11_FL5_N02
(646 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BT011339-1|AAR96131.1| 465|Drosophila melanogaster RH62603p pro... 81 2e-15
AF016835-1|AAC26144.1| 416|Drosophila melanogaster ribosomal pr... 80 2e-15
AE014297-1263|AAF54612.2| 161|Drosophila melanogaster CG4863-PD... 80 2e-15
AE014297-1262|AAF54610.2| 416|Drosophila melanogaster CG4863-PA... 80 2e-15
AE014297-1266|AAF54611.1| 125|Drosophila melanogaster CG4863-PC... 75 1e-13
AE014297-1265|AAF54609.1| 403|Drosophila melanogaster CG4863-PE... 75 1e-13
AE014297-1264|AAN13496.1| 403|Drosophila melanogaster CG4863-PB... 75 1e-13
AE014298-3010|AAF50913.2| 4899|Drosophila melanogaster CG11734-P... 28 9.4
>BT011339-1|AAR96131.1| 465|Drosophila melanogaster RH62603p
protein.
Length = 465
Score = 80.6 bits (190), Expect = 2e-15
Identities = 45/75 (60%), Positives = 51/75 (68%), Gaps = 1/75 (1%)
Frame = +2
Query: 29 SSMSAQKIFSTPXMGLWDSIPKRGPVVIGGKVKAFPKDDPSKPVHLTAFIGYKAGMTHVV 208
+ MS +K FS P G PK+ GKVKAFPKDD SKPVHLT FIGYKAGMTH+V
Sbjct: 10 TDMSHRK-FSAPRHGSMAFYPKKRSARHRGKVKAFPKDDASKPVHLTCFIGYKAGMTHIV 68
Query: 209 RET*PVPGSK-NQQE 250
RE PGSK N++E
Sbjct: 69 REA-DRPGSKINKKE 82
>AF016835-1|AAC26144.1| 416|Drosophila melanogaster ribosomal
protein L3 protein.
Length = 416
Score = 80.2 bits (189), Expect = 2e-15
Identities = 45/73 (61%), Positives = 50/73 (68%), Gaps = 1/73 (1%)
Frame = +2
Query: 35 MSAQKIFSTPXMGLWDSIPKRGPVVIGGKVKAFPKDDPSKPVHLTAFIGYKAGMTHVVRE 214
MS +K FS P G PK+ GKVKAFPKDD SKPVHLT FIGYKAGMTH+VRE
Sbjct: 1 MSHRK-FSAPRHGSMAFYPKKRSARHRGKVKAFPKDDASKPVHLTCFIGYKAGMTHIVRE 59
Query: 215 T*PVPGSK-NQQE 250
PGSK N++E
Sbjct: 60 A-DRPGSKINKKE 71
>AE014297-1263|AAF54612.2| 161|Drosophila melanogaster CG4863-PD,
isoform D protein.
Length = 161
Score = 80.2 bits (189), Expect = 2e-15
Identities = 45/73 (61%), Positives = 50/73 (68%), Gaps = 1/73 (1%)
Frame = +2
Query: 35 MSAQKIFSTPXMGLWDSIPKRGPVVIGGKVKAFPKDDPSKPVHLTAFIGYKAGMTHVVRE 214
MS +K FS P G PK+ GKVKAFPKDD SKPVHLT FIGYKAGMTH+VRE
Sbjct: 1 MSHRK-FSAPRHGSMAFYPKKRSARHRGKVKAFPKDDASKPVHLTCFIGYKAGMTHIVRE 59
Query: 215 T*PVPGSK-NQQE 250
PGSK N++E
Sbjct: 60 A-DRPGSKINKKE 71
>AE014297-1262|AAF54610.2| 416|Drosophila melanogaster CG4863-PA,
isoform A protein.
Length = 416
Score = 80.2 bits (189), Expect = 2e-15
Identities = 45/73 (61%), Positives = 50/73 (68%), Gaps = 1/73 (1%)
Frame = +2
Query: 35 MSAQKIFSTPXMGLWDSIPKRGPVVIGGKVKAFPKDDPSKPVHLTAFIGYKAGMTHVVRE 214
MS +K FS P G PK+ GKVKAFPKDD SKPVHLT FIGYKAGMTH+VRE
Sbjct: 1 MSHRK-FSAPRHGSMAFYPKKRSARHRGKVKAFPKDDASKPVHLTCFIGYKAGMTHIVRE 59
Query: 215 T*PVPGSK-NQQE 250
PGSK N++E
Sbjct: 60 A-DRPGSKINKKE 71
>AE014297-1266|AAF54611.1| 125|Drosophila melanogaster CG4863-PC,
isoform C protein.
Length = 125
Score = 74.5 bits (175), Expect = 1e-13
Identities = 38/55 (69%), Positives = 42/55 (76%), Gaps = 1/55 (1%)
Frame = +2
Query: 89 PKRGPVVIGGKVKAFPKDDPSKPVHLTAFIGYKAGMTHVVRET*PVPGSK-NQQE 250
PK+ GKVKAFPKDD SKPVHLT FIGYKAGMTH+VRE PGSK N++E
Sbjct: 5 PKKRSARHRGKVKAFPKDDASKPVHLTCFIGYKAGMTHIVREA-DRPGSKINKKE 58
Score = 29.5 bits (63), Expect = 4.1
Identities = 14/33 (42%), Positives = 17/33 (51%)
Frame = +1
Query: 76 MGFYPKKRSRRHRW*GQGVPERRP*QTCSFDCF 174
M FYPKKRS RHR + P+ + CF
Sbjct: 1 MAFYPKKRSARHRGKVKAFPKDDASKPVHLTCF 33
>AE014297-1265|AAF54609.1| 403|Drosophila melanogaster CG4863-PE,
isoform E protein.
Length = 403
Score = 74.5 bits (175), Expect = 1e-13
Identities = 38/55 (69%), Positives = 42/55 (76%), Gaps = 1/55 (1%)
Frame = +2
Query: 89 PKRGPVVIGGKVKAFPKDDPSKPVHLTAFIGYKAGMTHVVRET*PVPGSK-NQQE 250
PK+ GKVKAFPKDD SKPVHLT FIGYKAGMTH+VRE PGSK N++E
Sbjct: 5 PKKRSARHRGKVKAFPKDDASKPVHLTCFIGYKAGMTHIVREA-DRPGSKINKKE 58
Score = 29.5 bits (63), Expect = 4.1
Identities = 14/33 (42%), Positives = 17/33 (51%)
Frame = +1
Query: 76 MGFYPKKRSRRHRW*GQGVPERRP*QTCSFDCF 174
M FYPKKRS RHR + P+ + CF
Sbjct: 1 MAFYPKKRSARHRGKVKAFPKDDASKPVHLTCF 33
>AE014297-1264|AAN13496.1| 403|Drosophila melanogaster CG4863-PB,
isoform B protein.
Length = 403
Score = 74.5 bits (175), Expect = 1e-13
Identities = 38/55 (69%), Positives = 42/55 (76%), Gaps = 1/55 (1%)
Frame = +2
Query: 89 PKRGPVVIGGKVKAFPKDDPSKPVHLTAFIGYKAGMTHVVRET*PVPGSK-NQQE 250
PK+ GKVKAFPKDD SKPVHLT FIGYKAGMTH+VRE PGSK N++E
Sbjct: 5 PKKRSARHRGKVKAFPKDDASKPVHLTCFIGYKAGMTHIVREA-DRPGSKINKKE 58
Score = 29.5 bits (63), Expect = 4.1
Identities = 14/33 (42%), Positives = 17/33 (51%)
Frame = +1
Query: 76 MGFYPKKRSRRHRW*GQGVPERRP*QTCSFDCF 174
M FYPKKRS RHR + P+ + CF
Sbjct: 1 MAFYPKKRSARHRGKVKAFPKDDASKPVHLTCF 33
>AE014298-3010|AAF50913.2| 4899|Drosophila melanogaster CG11734-PB
protein.
Length = 4899
Score = 28.3 bits (60), Expect = 9.4
Identities = 12/25 (48%), Positives = 15/25 (60%)
Frame = -2
Query: 153 LLGSSFGNALTLPPMTTGPLFGIES 79
L G G A TLPP++ GPL +S
Sbjct: 3503 LTGGMSGGANTLPPLSAGPLSAFQS 3527
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 24,072,067
Number of Sequences: 53049
Number of extensions: 441569
Number of successful extensions: 698
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 656
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 690
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2724262200
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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