Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP11_FL5_M18
         (1014 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

07_01_0080 + 587674-588510                                             32   0.63 
04_03_1022 - 21778315-21779007                                         31   1.1  
08_01_0375 - 3307206-3307316,3307870-3307965,3308061-3308132,330...    29   4.5  
10_01_0100 + 1209424-1209538,1210373-1211073,1211158-1211379,121...    29   5.9  
04_01_0001 + 48461-48625,49314-50491,50620-50816,50896-52076           29   5.9  

>07_01_0080 + 587674-588510
          Length = 278

 Score = 32.3 bits (70), Expect = 0.63
 Identities = 14/34 (41%), Positives = 15/34 (44%)
 Frame = +3

Query: 702 SLPPGGGGEQXXXXPPPPXXGXXXXXXXPXPPPP 803
           S PP  GG+     PPPP          P PPPP
Sbjct: 77  STPPRLGGDGMFRRPPPPPPPPPSSGSPPPPPPP 110


>04_03_1022 - 21778315-21779007
          Length = 230

 Score = 31.5 bits (68), Expect = 1.1
 Identities = 14/34 (41%), Positives = 14/34 (41%)
 Frame = +3

Query: 702 SLPPGGGGEQXXXXPPPPXXGXXXXXXXPXPPPP 803
           S  PGG G      PPPP          P PPPP
Sbjct: 103 STTPGGHGGVPPYYPPPPVTPTPYYYPSPAPPPP 136


>08_01_0375 -
           3307206-3307316,3307870-3307965,3308061-3308132,
           3308247-3308315,3308427-3308513,3308753-3308858,
           3309118-3309237,3309327-3309406,3309497-3309878,
           3310746-3310814,3311460-3312202
          Length = 644

 Score = 29.5 bits (63), Expect = 4.5
 Identities = 17/57 (29%), Positives = 17/57 (29%), Gaps = 1/57 (1%)
 Frame = +2

Query: 749 PPPXGXXXXXXXXXPPPPP-XXKIKXXXXXLXXGXXAXXXXXPPPQXXXLPXXXXPP 916
           PPP G         PPPPP              G        PPPQ    P    PP
Sbjct: 42  PPPQGAPPPFLAPPPPPPPGPPPPHQPQFNFGPGPPQQQQPPPPPQMYYQPPPPPPP 98



 Score = 29.5 bits (63), Expect = 4.5
 Identities = 12/32 (37%), Positives = 12/32 (37%)
 Frame = +3

Query: 708 PPGGGGEQXXXXPPPPXXGXXXXXXXPXPPPP 803
           PP G        PPPP          P PPPP
Sbjct: 97  PPYGVNSSQPPPPPPPPPSPPPSAPPPPPPPP 128


>10_01_0100 +
           1209424-1209538,1210373-1211073,1211158-1211379,
           1211452-1211878,1212091-1213219,1213623-1213746,
           1214207-1214278,1215480-1215578,1215617-1215640,
           1215704-1215745,1215815-1215895,1215983-1216114,
           1216115-1216196,1216271-1216365,1218499-1218570,
           1218676-1218792,1219379-1219447,1219521-1219587,
           1219886-1220025
          Length = 1269

 Score = 29.1 bits (62), Expect = 5.9
 Identities = 11/20 (55%), Positives = 11/20 (55%)
 Frame = -1

Query: 528 PPPPXXXXXXXKXIFSPPPP 469
           PPPP       K  FSPPPP
Sbjct: 547 PPPPPPPPSGNKPAFSPPPP 566


>04_01_0001 + 48461-48625,49314-50491,50620-50816,50896-52076
          Length = 906

 Score = 29.1 bits (62), Expect = 5.9
 Identities = 14/33 (42%), Positives = 14/33 (42%)
 Frame = +3

Query: 705 LPPGGGGEQXXXXPPPPXXGXXXXXXXPXPPPP 803
           LPPG G       PPPP          P PPPP
Sbjct: 308 LPPGAGAGAGTGAPPPP----PAHPAAPAPPPP 336


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.311    0.142    0.459 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,934,574
Number of Sequences: 37544
Number of extensions: 352690
Number of successful extensions: 1431
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 461
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1245
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2987258700
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.7 bits)