Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP11_FL5_M17
(841 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ026039-1|AAY87898.1| 427|Apis mellifera nicotinic acetylcholi... 36 6e-04
DQ667183-1|ABG75735.1| 463|Apis mellifera GABA-gated ion channe... 33 0.002
DQ026037-1|AAY87896.1| 431|Apis mellifera nicotinic acetylcholi... 33 0.003
DQ026033-1|AAY87892.1| 569|Apis mellifera nicotinic acetylcholi... 31 0.010
DQ026032-1|AAY87891.1| 566|Apis mellifera nicotinic acetylcholi... 31 0.013
AY500239-1|AAR92109.1| 555|Apis mellifera neuronal nicotinic ac... 30 0.023
AF514804-1|AAM51823.1| 537|Apis mellifera neuronal nicotinic ac... 30 0.031
DQ667185-1|ABG75737.1| 447|Apis mellifera glutamate-gated chlor... 29 0.040
DQ026036-1|AAY87895.1| 529|Apis mellifera nicotinic acetylcholi... 29 0.053
DQ026035-1|AAY87894.1| 529|Apis mellifera nicotinic acetylcholi... 29 0.053
DQ026031-1|AAY87890.1| 601|Apis mellifera nicotinic acetylcholi... 29 0.053
AY540846-1|AAS48080.1| 541|Apis mellifera neuronal nicotinic ac... 29 0.053
EF127800-1|ABL67937.1| 461|Apis mellifera nicotinic acetylcholi... 29 0.071
DQ026034-1|AAY87893.1| 569|Apis mellifera nicotinic acetylcholi... 29 0.071
DQ026038-1|AAY87897.1| 520|Apis mellifera nicotinic acetylcholi... 28 0.12
AY569781-1|AAS75781.1| 461|Apis mellifera neuronal nicotinic ac... 28 0.12
EF127805-1|ABL67942.1| 461|Apis mellifera nicotinic acetylcholi... 27 0.28
EF127804-1|ABL67941.1| 461|Apis mellifera nicotinic acetylcholi... 27 0.28
EF127803-1|ABL67940.1| 461|Apis mellifera nicotinic acetylcholi... 27 0.28
EF127802-1|ABL67939.1| 461|Apis mellifera nicotinic acetylcholi... 27 0.28
EF127801-1|ABL67938.1| 461|Apis mellifera nicotinic acetylcholi... 27 0.28
DQ667193-1|ABG75745.1| 510|Apis mellifera cys-loop ligand-gated... 27 0.28
DQ667186-1|ABG75738.1| 447|Apis mellifera glutamate-gated chlor... 27 0.28
DQ667187-1|ABG75739.1| 428|Apis mellifera histamine-gated chlor... 26 0.50
DQ667188-1|ABG75740.1| 383|Apis mellifera histamine-gated chlor... 25 0.87
DQ011226-1|AAY63895.1| 471|Apis mellifera Rh-like protein protein. 24 2.0
AB161182-1|BAD08344.1| 1040|Apis mellifera metabotropic glutamat... 22 8.1
>DQ026039-1|AAY87898.1| 427|Apis mellifera nicotinic acetylcholine
receptor beta2subunit protein.
Length = 427
Score = 35.5 bits (78), Expect = 6e-04
Identities = 21/72 (29%), Positives = 34/72 (47%), Gaps = 5/72 (6%)
Frame = +3
Query: 114 CENATSLSLMIDS---LLATYDRDSPPDSKIV--VNLILHLRHANIRESESTVRIQADLQ 278
C++ TS S + L YDRD P+ K ++ L ++H N+ E TV L+
Sbjct: 28 CKDITSTSALYRLKLYLFCDYDRDIIPEQKNATKIDFGLSIQHYNVDEYSHTVDFHVMLK 87
Query: 279 MNWIDKRLSWNA 314
+ W L+W +
Sbjct: 88 LMWEQSHLTWKS 99
Score = 25.0 bits (52), Expect = 0.87
Identities = 9/22 (40%), Positives = 12/22 (54%)
Frame = +2
Query: 506 WPNDMQTCTFKFGSRMHXSDEM 571
WP D+ CT S H S+E+
Sbjct: 166 WPYDILNCTIHIASWSHGSNEI 187
>DQ667183-1|ABG75735.1| 463|Apis mellifera GABA-gated ion channel
protein.
Length = 463
Score = 33.5 bits (73), Expect = 0.002
Identities = 19/70 (27%), Positives = 36/70 (51%), Gaps = 4/70 (5%)
Frame = +3
Query: 120 NATSLSLMIDSLLATYDRDSPPD---SKIVVNLILHLRHAN-IRESESTVRIQADLQMNW 287
N +++S ++D+LL YD PD V + + +R I E + T + + +W
Sbjct: 2 NHSNISELLDNLLRGYDNSVRPDFGGPPATVEVDIMVRSMGPISEVDMTYSMDCYFRQSW 61
Query: 288 IDKRLSWNAG 317
+D+RL++ G
Sbjct: 62 VDRRLAFQGG 71
Score = 30.3 bits (65), Expect = 0.023
Identities = 13/28 (46%), Positives = 16/28 (57%)
Frame = +2
Query: 464 RLDISTPISMQLDNWPNDMQTCTFKFGS 547
RL I M L+N+P D Q C +FGS
Sbjct: 123 RLTIKAGCPMNLENFPMDTQRCPLQFGS 150
>DQ026037-1|AAY87896.1| 431|Apis mellifera nicotinic acetylcholine
receptor alpha9subunit protein.
Length = 431
Score = 33.1 bits (72), Expect = 0.003
Identities = 11/30 (36%), Positives = 18/30 (60%)
Frame = +2
Query: 503 NWPNDMQTCTFKFGSRMHXSDEMDXVIDKR 592
+WP D C FGS +H +E++ +DK+
Sbjct: 175 SWPYDTHRCRINFGSWVHSGEEVNIFLDKK 204
>DQ026033-1|AAY87892.1| 569|Apis mellifera nicotinic acetylcholine
receptor alpha4subunit protein.
Length = 569
Score = 31.5 bits (68), Expect = 0.010
Identities = 15/39 (38%), Positives = 21/39 (53%), Gaps = 1/39 (2%)
Frame = +1
Query: 343 VSSERLWRPDVVLL-NAAATTAGDYALRARVSNNGSVSW 456
V S+ +WRPD+VL NA A +A + + G V W
Sbjct: 105 VPSDHIWRPDIVLYNNADGNFEVTLATKATIYHQGLVEW 143
Score = 25.4 bits (53), Expect = 0.66
Identities = 10/28 (35%), Positives = 17/28 (60%)
Frame = +2
Query: 491 MQLDNWPNDMQTCTFKFGSRMHXSDEMD 574
+ ++ +P D QTC KFGS + ++D
Sbjct: 155 IDVEYFPFDEQTCVLKFGSWTYDGFKVD 182
Score = 22.2 bits (45), Expect = 6.1
Identities = 10/31 (32%), Positives = 16/31 (51%)
Frame = -1
Query: 322 TPPAFQLSRLSIQFI*RSACIRTVDSDSRML 230
+PPAF SR + C+R + ++ML
Sbjct: 471 SPPAFSHSRCPPEIHKSCICVRFIAEHTKML 501
>DQ026032-1|AAY87891.1| 566|Apis mellifera nicotinic acetylcholine
receptor alpha3subunit protein.
Length = 566
Score = 31.1 bits (67), Expect = 0.013
Identities = 15/39 (38%), Positives = 21/39 (53%), Gaps = 1/39 (2%)
Frame = +1
Query: 343 VSSERLWRPDVVLL-NAAATTAGDYALRARVSNNGSVSW 456
V S+ +WRPD+VL NA A +A ++ G V W
Sbjct: 101 VPSDHIWRPDIVLYNNADGNFEVTLATKATLNYTGRVEW 139
Score = 25.8 bits (54), Expect = 0.50
Identities = 10/28 (35%), Positives = 17/28 (60%)
Frame = +2
Query: 491 MQLDNWPNDMQTCTFKFGSRMHXSDEMD 574
+ ++ +P D QTC KFGS + ++D
Sbjct: 151 IDVEYFPFDEQTCVMKFGSWTYDGFQVD 178
>AY500239-1|AAR92109.1| 555|Apis mellifera neuronal nicotinic
acetylcholine receptoralpha7-1 protein.
Length = 555
Score = 30.3 bits (65), Expect = 0.023
Identities = 14/36 (38%), Positives = 20/36 (55%), Gaps = 1/36 (2%)
Frame = +1
Query: 343 VSSERLWRPDVVLLNAA-ATTAGDYALRARVSNNGS 447
+ RLW+PDV++ N+A G Y V NNG+
Sbjct: 100 IPPHRLWKPDVLMYNSADEGFDGTYPTNVVVKNNGT 135
Score = 23.0 bits (47), Expect = 3.5
Identities = 22/91 (24%), Positives = 37/91 (40%), Gaps = 7/91 (7%)
Frame = +3
Query: 75 RFLLTCAIASAAE--CENATSLSLMIDSLLATYDRDSPP----DSKIVVNLILHLRHA-N 233
R+ L AIA AA + +++ LL TY+ P +V++ L L +
Sbjct: 3 RWTLMAAIALAASGLVNGGSHEKRLLNDLLDTYNVLERPVGNESEPLVLSFGLTLMQIID 62
Query: 234 IRESESTVRIQADLQMNWIDKRLSWNAGGVG 326
+ E + L++ W D + WN G
Sbjct: 63 VDEKNQLLITNLWLKLEWNDVNMRWNVSDYG 93
Score = 22.2 bits (45), Expect = 6.1
Identities = 9/23 (39%), Positives = 13/23 (56%)
Frame = +2
Query: 506 WPNDMQTCTFKFGSRMHXSDEMD 574
+P D Q C KFGS + ++D
Sbjct: 155 FPFDDQRCEMKFGSWTYDGFQLD 177
>AF514804-1|AAM51823.1| 537|Apis mellifera neuronal nicotinic
acetylcholine receptoralpha-3 protein.
Length = 537
Score = 29.9 bits (64), Expect = 0.031
Identities = 18/48 (37%), Positives = 24/48 (50%), Gaps = 4/48 (8%)
Frame = +1
Query: 325 GCSTWLVSSERLWRPDVVLLNAAATTAGDYAL----RARVSNNGSVSW 456
G V SE +W PD+VL N A G+Y + +A + G VSW
Sbjct: 104 GVEMLYVPSENIWLPDIVLYNNA---DGNYEVTLMTKATLKYTGDVSW 148
Score = 24.2 bits (50), Expect = 1.5
Identities = 9/28 (32%), Positives = 17/28 (60%)
Frame = +2
Query: 491 MQLDNWPNDMQTCTFKFGSRMHXSDEMD 574
+ ++ +P D Q+C KFGS + ++D
Sbjct: 160 INVEYFPFDEQSCIMKFGSWTYNGAQVD 187
>DQ667185-1|ABG75737.1| 447|Apis mellifera glutamate-gated chloride
channel protein.
Length = 447
Score = 29.5 bits (63), Expect = 0.040
Identities = 20/73 (27%), Positives = 36/73 (49%), Gaps = 7/73 (9%)
Frame = +3
Query: 141 MIDSLLATYDRDSPP------DSKIVVNLILHLRH-ANIRESESTVRIQADLQMNWIDKR 299
++D++L YD P D +V + L +R A I + + +Q + W+D+R
Sbjct: 35 VLDNILGGYDARIRPSGENATDGPAIVRVNLFVRSIATISDIKMEYSVQLTFREQWLDER 94
Query: 300 LSWNAGGVGLQHL 338
L +N G L++L
Sbjct: 95 LRFNDFGGRLKYL 107
>DQ026036-1|AAY87895.1| 529|Apis mellifera nicotinic acetylcholine
receptor alpha6subunit protein.
Length = 529
Score = 29.1 bits (62), Expect = 0.053
Identities = 12/36 (33%), Positives = 22/36 (61%), Gaps = 1/36 (2%)
Frame = +1
Query: 343 VSSERLWRPDVVLLNAA-ATTAGDYALRARVSNNGS 447
++ +LW+PD+++ N+A G Y V++NGS
Sbjct: 131 ITPNKLWKPDILMYNSADEGFDGTYQTNVVVTHNGS 166
Score = 25.4 bits (53), Expect = 0.66
Identities = 9/32 (28%), Positives = 15/32 (46%)
Frame = +3
Query: 231 NIRESESTVRIQADLQMNWIDKRLSWNAGGVG 326
++ E + A L++ W+D L WN G
Sbjct: 93 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYG 124
Score = 25.0 bits (52), Expect = 0.87
Identities = 10/26 (38%), Positives = 16/26 (61%)
Frame = +2
Query: 506 WPNDMQTCTFKFGSRMHXSDEMDXVI 583
+P D Q C KFGS + +++D V+
Sbjct: 186 FPFDDQHCDMKFGSWTYDGNQVDLVL 211
>DQ026035-1|AAY87894.1| 529|Apis mellifera nicotinic acetylcholine
receptor alpha6subunit protein.
Length = 529
Score = 29.1 bits (62), Expect = 0.053
Identities = 12/36 (33%), Positives = 22/36 (61%), Gaps = 1/36 (2%)
Frame = +1
Query: 343 VSSERLWRPDVVLLNAA-ATTAGDYALRARVSNNGS 447
++ +LW+PD+++ N+A G Y V++NGS
Sbjct: 131 ITPNKLWKPDILMYNSADEGFDGTYQTNVVVTHNGS 166
Score = 25.4 bits (53), Expect = 0.66
Identities = 9/32 (28%), Positives = 15/32 (46%)
Frame = +3
Query: 231 NIRESESTVRIQADLQMNWIDKRLSWNAGGVG 326
++ E + A L++ W+D L WN G
Sbjct: 93 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYG 124
Score = 25.0 bits (52), Expect = 0.87
Identities = 10/26 (38%), Positives = 16/26 (61%)
Frame = +2
Query: 506 WPNDMQTCTFKFGSRMHXSDEMDXVI 583
+P D Q C KFGS + +++D V+
Sbjct: 186 FPFDDQHCDMKFGSWTYDGNQVDLVL 211
>DQ026031-1|AAY87890.1| 601|Apis mellifera nicotinic acetylcholine
receptor alpha1subunit protein.
Length = 601
Score = 29.1 bits (62), Expect = 0.053
Identities = 18/48 (37%), Positives = 25/48 (52%), Gaps = 4/48 (8%)
Frame = +1
Query: 325 GCSTWLVSSERLWRPDVVLLNAAATTAGDYAL----RARVSNNGSVSW 456
G T V SE +W PD+VL N A G+Y + +A + + G V W
Sbjct: 91 GVDTLHVPSEHIWLPDIVLYNNA---DGNYEVTIMTKAILHHTGKVVW 135
Score = 23.8 bits (49), Expect = 2.0
Identities = 9/19 (47%), Positives = 13/19 (68%)
Frame = +2
Query: 491 MQLDNWPNDMQTCTFKFGS 547
+ ++ +P D QTC KFGS
Sbjct: 147 IDVEYFPFDEQTCFMKFGS 165
>AY540846-1|AAS48080.1| 541|Apis mellifera neuronal nicotinic
acetylcholine receptorApisa2 subunit protein.
Length = 541
Score = 29.1 bits (62), Expect = 0.053
Identities = 19/48 (39%), Positives = 25/48 (52%), Gaps = 2/48 (4%)
Frame = +1
Query: 319 EWGCSTWL-VSSERLWRPDVVLLNAAATTAGDYAL-RARVSNNGSVSW 456
E+G T L V SE +W PD+VL N A G + +A + G V W
Sbjct: 88 EYGGVTELYVPSEHIWLPDIVLYNNADGEYGVTTMTKAILHYTGKVLW 135
Score = 25.0 bits (52), Expect = 0.87
Identities = 10/23 (43%), Positives = 14/23 (60%)
Frame = +2
Query: 506 WPNDMQTCTFKFGSRMHXSDEMD 574
+P D QTC KFGS + ++D
Sbjct: 152 FPFDQQTCFMKFGSWTYDGIQID 174
>EF127800-1|ABL67937.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 1 protein.
Length = 461
Score = 28.7 bits (61), Expect = 0.071
Identities = 12/36 (33%), Positives = 22/36 (61%), Gaps = 1/36 (2%)
Frame = +1
Query: 343 VSSERLWRPDVVLLNAA-ATTAGDYALRARVSNNGS 447
++ +LW+PD+++ N+A G Y V++NGS
Sbjct: 63 ITPNKLWKPDILMYNSADEGFDGTYQTSVVVTHNGS 98
Score = 25.4 bits (53), Expect = 0.66
Identities = 9/32 (28%), Positives = 15/32 (46%)
Frame = +3
Query: 231 NIRESESTVRIQADLQMNWIDKRLSWNAGGVG 326
++ E + A L++ W+D L WN G
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYG 56
Score = 25.0 bits (52), Expect = 0.87
Identities = 10/26 (38%), Positives = 16/26 (61%)
Frame = +2
Query: 506 WPNDMQTCTFKFGSRMHXSDEMDXVI 583
+P D Q C KFGS + +++D V+
Sbjct: 118 FPFDDQHCDMKFGSWTYDGNQVDLVL 143
>DQ026034-1|AAY87893.1| 569|Apis mellifera nicotinic acetylcholine
receptor alpha4subunit protein.
Length = 569
Score = 28.7 bits (61), Expect = 0.071
Identities = 17/42 (40%), Positives = 24/42 (57%), Gaps = 4/42 (9%)
Frame = +1
Query: 343 VSSERLWRPDVVLLNAAATTAGDYAL----RARVSNNGSVSW 456
V S+ +WRPD+VL N A G+Y + +A V +G V W
Sbjct: 105 VPSDHIWRPDIVLYNNA---DGNYEVTLMTKATVYYSGLVVW 143
Score = 25.8 bits (54), Expect = 0.50
Identities = 10/29 (34%), Positives = 18/29 (62%)
Frame = +2
Query: 488 SMQLDNWPNDMQTCTFKFGSRMHXSDEMD 574
S+ ++ +P D+QTC K GS + ++D
Sbjct: 154 SIDVEFFPYDVQTCVLKLGSWTYDGFKVD 182
Score = 22.2 bits (45), Expect = 6.1
Identities = 10/31 (32%), Positives = 16/31 (51%)
Frame = -1
Query: 322 TPPAFQLSRLSIQFI*RSACIRTVDSDSRML 230
+PPAF SR + C+R + ++ML
Sbjct: 471 SPPAFSHSRCPPEIHKSCICVRFIAEHTKML 501
>DQ026038-1|AAY87897.1| 520|Apis mellifera nicotinic acetylcholine
receptor beta1subunit protein.
Length = 520
Score = 27.9 bits (59), Expect = 0.12
Identities = 14/39 (35%), Positives = 23/39 (58%), Gaps = 4/39 (10%)
Frame = +1
Query: 352 ERLWRPDVVLLNAAATTAGDYALRAR----VSNNGSVSW 456
+++W+PD+VL N A G+Y +R + + NG V W
Sbjct: 106 DKVWKPDIVLFNNA---DGNYEVRYKSNVLIYPNGDVLW 141
Score = 25.8 bits (54), Expect = 0.50
Identities = 10/26 (38%), Positives = 14/26 (53%)
Frame = +2
Query: 506 WPNDMQTCTFKFGSRMHXSDEMDXVI 583
+P D QTC KFGS D++ +
Sbjct: 158 FPFDQQTCIMKFGSWTFNGDQVSLAL 183
Score = 25.4 bits (53), Expect = 0.66
Identities = 14/53 (26%), Positives = 26/53 (49%), Gaps = 4/53 (7%)
Frame = +3
Query: 192 KIVVNL-ILHLRHANIRESESTVRIQADLQMNWIDKRLSWNA---GGVGLQHL 338
K+ VN + ++ N+ E ++ L+ W D +L W+ GG+G+ L
Sbjct: 51 KVHVNFGLAFVQLINVNEKNQIMKSNVWLRFIWTDYQLQWDEADYGGIGVLRL 103
>AY569781-1|AAS75781.1| 461|Apis mellifera neuronal nicotinic
acetylcholine Apisa7-2 subunit protein.
Length = 461
Score = 27.9 bits (59), Expect = 0.12
Identities = 14/40 (35%), Positives = 18/40 (45%), Gaps = 2/40 (5%)
Frame = +1
Query: 343 VSSERLWRPDVVLLNAAATTAGDYALRAR--VSNNGSVSW 456
V R+WRPD +L N A + VS+ G V W
Sbjct: 82 VPYNRVWRPDTILYNNADPQYSSAVINTNVIVSHTGEVVW 121
>EF127805-1|ABL67942.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 6 protein.
Length = 461
Score = 26.6 bits (56), Expect = 0.28
Identities = 11/36 (30%), Positives = 22/36 (61%), Gaps = 1/36 (2%)
Frame = +1
Query: 343 VSSERLWRPDVVLLNAA-ATTAGDYALRARVSNNGS 447
++ +LW+PD+++ N+A G Y V+++GS
Sbjct: 63 ITPNKLWKPDILMYNSADEGFDGTYQTSVVVTHDGS 98
Score = 25.4 bits (53), Expect = 0.66
Identities = 9/32 (28%), Positives = 15/32 (46%)
Frame = +3
Query: 231 NIRESESTVRIQADLQMNWIDKRLSWNAGGVG 326
++ E + A L++ W+D L WN G
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYG 56
Score = 25.0 bits (52), Expect = 0.87
Identities = 10/26 (38%), Positives = 16/26 (61%)
Frame = +2
Query: 506 WPNDMQTCTFKFGSRMHXSDEMDXVI 583
+P D Q C KFGS + +++D V+
Sbjct: 118 FPFDDQHCDMKFGSWTYDGNQVDLVL 143
>EF127804-1|ABL67941.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 5 protein.
Length = 461
Score = 26.6 bits (56), Expect = 0.28
Identities = 11/36 (30%), Positives = 22/36 (61%), Gaps = 1/36 (2%)
Frame = +1
Query: 343 VSSERLWRPDVVLLNAA-ATTAGDYALRARVSNNGS 447
++ +LW+PD+++ N+A G Y V+++GS
Sbjct: 63 ITPNKLWKPDILMYNSADEGFDGTYQTSVVVTHDGS 98
Score = 25.4 bits (53), Expect = 0.66
Identities = 9/32 (28%), Positives = 15/32 (46%)
Frame = +3
Query: 231 NIRESESTVRIQADLQMNWIDKRLSWNAGGVG 326
++ E + A L++ W+D L WN G
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYG 56
Score = 25.0 bits (52), Expect = 0.87
Identities = 10/26 (38%), Positives = 16/26 (61%)
Frame = +2
Query: 506 WPNDMQTCTFKFGSRMHXSDEMDXVI 583
+P D Q C KFGS + +++D V+
Sbjct: 118 FPFDDQHCDMKFGSWTYDGNQVDLVL 143
>EF127803-1|ABL67940.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 4 protein.
Length = 461
Score = 26.6 bits (56), Expect = 0.28
Identities = 11/36 (30%), Positives = 22/36 (61%), Gaps = 1/36 (2%)
Frame = +1
Query: 343 VSSERLWRPDVVLLNAA-ATTAGDYALRARVSNNGS 447
++ +LW+PD+++ N+A G Y V+++GS
Sbjct: 63 ITPNKLWKPDILMYNSADEGFDGTYQTSVVVTHDGS 98
Score = 25.4 bits (53), Expect = 0.66
Identities = 9/32 (28%), Positives = 15/32 (46%)
Frame = +3
Query: 231 NIRESESTVRIQADLQMNWIDKRLSWNAGGVG 326
++ E + A L++ W+D L WN G
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYG 56
Score = 25.0 bits (52), Expect = 0.87
Identities = 10/26 (38%), Positives = 16/26 (61%)
Frame = +2
Query: 506 WPNDMQTCTFKFGSRMHXSDEMDXVI 583
+P D Q C KFGS + +++D V+
Sbjct: 118 FPFDDQHCDMKFGSWTYDGNQVDLVL 143
>EF127802-1|ABL67939.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 3 protein.
Length = 461
Score = 26.6 bits (56), Expect = 0.28
Identities = 11/36 (30%), Positives = 22/36 (61%), Gaps = 1/36 (2%)
Frame = +1
Query: 343 VSSERLWRPDVVLLNAA-ATTAGDYALRARVSNNGS 447
++ +LW+PD+++ N+A G Y V+++GS
Sbjct: 63 ITPNKLWKPDILMYNSADEGFDGTYQTSVVVTHDGS 98
Score = 25.4 bits (53), Expect = 0.66
Identities = 9/32 (28%), Positives = 15/32 (46%)
Frame = +3
Query: 231 NIRESESTVRIQADLQMNWIDKRLSWNAGGVG 326
++ E + A L++ W+D L WN G
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYG 56
Score = 25.0 bits (52), Expect = 0.87
Identities = 10/26 (38%), Positives = 16/26 (61%)
Frame = +2
Query: 506 WPNDMQTCTFKFGSRMHXSDEMDXVI 583
+P D Q C KFGS + +++D V+
Sbjct: 118 FPFDDQHCDMKFGSWTYDGNQVDLVL 143
>EF127801-1|ABL67938.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 2 protein.
Length = 461
Score = 26.6 bits (56), Expect = 0.28
Identities = 11/36 (30%), Positives = 22/36 (61%), Gaps = 1/36 (2%)
Frame = +1
Query: 343 VSSERLWRPDVVLLNAA-ATTAGDYALRARVSNNGS 447
++ +LW+PD+++ N+A G Y V+++GS
Sbjct: 63 ITPNKLWKPDILMYNSADEGFDGTYQTSVVVTHDGS 98
Score = 25.4 bits (53), Expect = 0.66
Identities = 9/32 (28%), Positives = 15/32 (46%)
Frame = +3
Query: 231 NIRESESTVRIQADLQMNWIDKRLSWNAGGVG 326
++ E + A L++ W+D L WN G
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYG 56
Score = 25.4 bits (53), Expect = 0.66
Identities = 11/31 (35%), Positives = 18/31 (58%)
Frame = +2
Query: 491 MQLDNWPNDMQTCTFKFGSRMHXSDEMDXVI 583
M + +P D Q C KFGS + +++D V+
Sbjct: 113 MDIAWFPFDDQHCDMKFGSWTYDGNQVDLVL 143
>DQ667193-1|ABG75745.1| 510|Apis mellifera cys-loop ligand-gated
ion channel subunit protein.
Length = 510
Score = 26.6 bits (56), Expect = 0.28
Identities = 12/28 (42%), Positives = 15/28 (53%)
Frame = +2
Query: 464 RLDISTPISMQLDNWPNDMQTCTFKFGS 547
RL I M+L N+P D Q+C GS
Sbjct: 155 RLTIKAKCPMELRNFPMDRQSCPLILGS 182
Score = 22.2 bits (45), Expect = 6.1
Identities = 7/12 (58%), Positives = 8/12 (66%)
Frame = +1
Query: 352 ERLWRPDVVLLN 387
ER+WRPD N
Sbjct: 115 ERIWRPDTYFYN 126
>DQ667186-1|ABG75738.1| 447|Apis mellifera glutamate-gated chloride
channel protein.
Length = 447
Score = 26.6 bits (56), Expect = 0.28
Identities = 19/73 (26%), Positives = 35/73 (47%), Gaps = 7/73 (9%)
Frame = +3
Query: 141 MIDSLLATYDRDSPP------DSKIVVNLILHLRH-ANIRESESTVRIQADLQMNWIDKR 299
++D++L YD P D VV + + +R + I + +Q + W+D+R
Sbjct: 35 VLDNILGGYDARIRPSGENATDGPAVVRVNIFVRSISKIDDVTMEYSVQLTFREQWLDER 94
Query: 300 LSWNAGGVGLQHL 338
L +N G L++L
Sbjct: 95 LRFNDFGGRLKYL 107
>DQ667187-1|ABG75739.1| 428|Apis mellifera histamine-gated chloride
channel protein.
Length = 428
Score = 25.8 bits (54), Expect = 0.50
Identities = 11/36 (30%), Positives = 18/36 (50%)
Frame = +2
Query: 464 RLDISTPISMQLDNWPNDMQTCTFKFGSRMHXSDEM 571
+L + +M +P+D Q C + S H +DEM
Sbjct: 156 KLTLKLSCAMNFLIYPHDTQECKLQMESLSHTTDEM 191
>DQ667188-1|ABG75740.1| 383|Apis mellifera histamine-gated chloride
channel protein.
Length = 383
Score = 25.0 bits (52), Expect = 0.87
Identities = 8/38 (21%), Positives = 21/38 (55%)
Frame = +2
Query: 458 IKRLDISTPISMQLDNWPNDMQTCTFKFGSRMHXSDEM 571
+ +L + +M+ +++P+D Q C+ S H + ++
Sbjct: 123 MSKLTLVLSCAMKFESYPHDTQICSMMIESLSHTTQDL 160
>DQ011226-1|AAY63895.1| 471|Apis mellifera Rh-like protein protein.
Length = 471
Score = 23.8 bits (49), Expect = 2.0
Identities = 14/61 (22%), Positives = 31/61 (50%), Gaps = 4/61 (6%)
Frame = +3
Query: 192 KIVVNLILHLRHANIRESESTVRIQADLQMNWIDKRLSWNAGGVGLQHLAGVL----GTL 359
+ ++N +L + + + ++ + D + N + + S AGGV + AG++ GTL
Sbjct: 239 RAIINTLLSISASCVIAFATSALVSKDSKFNMVHIQNSTLAGGVAIGTAAGMMCQPVGTL 298
Query: 360 V 362
+
Sbjct: 299 I 299
>AB161182-1|BAD08344.1| 1040|Apis mellifera metabotropic glutamate
receptor protein.
Length = 1040
Score = 21.8 bits (44), Expect = 8.1
Identities = 9/24 (37%), Positives = 12/24 (50%)
Frame = -3
Query: 137 GQ*CCVFAFCRTSYSTSEEKPVTR 66
G+ CC F T Y + K VT+
Sbjct: 602 GEQCCWHCFNCTQYQIRDHKDVTQ 625
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 232,164
Number of Sequences: 438
Number of extensions: 5535
Number of successful extensions: 68
Number of sequences better than 10.0: 27
Number of HSP's better than 10.0 without gapping: 36
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 68
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 26945694
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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