Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP11_FL5_M16
(827 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY540846-1|AAS48080.1| 541|Apis mellifera neuronal nicotinic ac... 56 4e-10
DQ667183-1|ABG75735.1| 463|Apis mellifera GABA-gated ion channe... 54 1e-09
DQ026032-1|AAY87891.1| 566|Apis mellifera nicotinic acetylcholi... 51 1e-08
DQ026031-1|AAY87890.1| 601|Apis mellifera nicotinic acetylcholi... 50 3e-08
DQ026034-1|AAY87893.1| 569|Apis mellifera nicotinic acetylcholi... 50 3e-08
DQ026033-1|AAY87892.1| 569|Apis mellifera nicotinic acetylcholi... 50 3e-08
DQ026036-1|AAY87895.1| 529|Apis mellifera nicotinic acetylcholi... 49 6e-08
DQ026035-1|AAY87894.1| 529|Apis mellifera nicotinic acetylcholi... 49 6e-08
AF514804-1|AAM51823.1| 537|Apis mellifera neuronal nicotinic ac... 49 6e-08
EF127800-1|ABL67937.1| 461|Apis mellifera nicotinic acetylcholi... 48 1e-07
DQ667182-1|ABG75734.1| 445|Apis mellifera GABA-gated chloride c... 48 1e-07
DQ026038-1|AAY87897.1| 520|Apis mellifera nicotinic acetylcholi... 48 1e-07
EF127801-1|ABL67938.1| 461|Apis mellifera nicotinic acetylcholi... 47 2e-07
EF127805-1|ABL67942.1| 461|Apis mellifera nicotinic acetylcholi... 47 2e-07
DQ667181-1|ABG75733.1| 445|Apis mellifera GABA-gated chloride c... 47 2e-07
DQ667193-1|ABG75745.1| 510|Apis mellifera cys-loop ligand-gated... 46 3e-07
EF127803-1|ABL67940.1| 461|Apis mellifera nicotinic acetylcholi... 46 4e-07
AY569781-1|AAS75781.1| 461|Apis mellifera neuronal nicotinic ac... 46 4e-07
EF127804-1|ABL67941.1| 461|Apis mellifera nicotinic acetylcholi... 46 6e-07
EF127802-1|ABL67939.1| 461|Apis mellifera nicotinic acetylcholi... 46 6e-07
DQ026039-1|AAY87898.1| 427|Apis mellifera nicotinic acetylcholi... 45 7e-07
AY500239-1|AAR92109.1| 555|Apis mellifera neuronal nicotinic ac... 45 1e-06
AF094822-1|AAC63381.1| 365|Apis mellifera GABA receptor Rdl sub... 39 5e-05
DQ667194-1|ABG75746.1| 391|Apis mellifera cys-loop ligand-gated... 25 1.1
DQ026037-1|AAY87896.1| 431|Apis mellifera nicotinic acetylcholi... 24 1.5
AB161182-1|BAD08344.1| 1040|Apis mellifera metabotropic glutamat... 23 3.4
DQ667187-1|ABG75739.1| 428|Apis mellifera histamine-gated chlor... 23 4.6
AB270697-1|BAF75928.1| 735|Apis mellifera FoxP protein protein. 22 8.0
>AY540846-1|AAS48080.1| 541|Apis mellifera neuronal nicotinic
acetylcholine receptorApisa2 subunit protein.
Length = 541
Score = 56.0 bits (129), Expect = 4e-10
Identities = 45/152 (29%), Positives = 66/152 (43%), Gaps = 9/152 (5%)
Frame = +3
Query: 69 IASAAECENATSLSLMIDSLLATYDRESPPDSK----IVVNLTLHLRHA---NIRESEST 227
I SA C + D LL+ Y+R P S +VV L L L N+++ T
Sbjct: 9 ILSARICHGNPDAKRLYDDLLSNYNRLIRPVSNNNDTVVVKLGLRLSQLIDLNLKDQILT 68
Query: 228 VRILADLQMNWIDKRLSWNAGEWGCSTWL-VSSERLWRPDVVLLNAAATTAGDYAL-RAR 401
+ L+ W D + W+ E+G T L V SE +W PD+VL N A G + +A
Sbjct: 69 TNVW--LEHEWQDHKFQWDPAEYGGVTELYVPSEHIWLPDIVLYNNADGEYGVTTMTKAI 126
Query: 402 VSNNGSVSWIKRLDISTPISMQLDNWPNDMQT 497
+ G V W + + + +P D QT
Sbjct: 127 LHYTGKVLWTPPAIFKSSCEIDVRYFPFDQQT 158
>DQ667183-1|ABG75735.1| 463|Apis mellifera GABA-gated ion channel
protein.
Length = 463
Score = 54.4 bits (125), Expect = 1e-09
Identities = 38/146 (26%), Positives = 67/146 (45%), Gaps = 7/146 (4%)
Frame = +3
Query: 93 NATSLSLMIDSLLATYDRESPPD---SKIVVNLTLHLRHAN-IRESESTVRILADLQMNW 260
N +++S ++D+LL YD PD V + + +R I E + T + + +W
Sbjct: 2 NHSNISELLDNLLRGYDNSVRPDFGGPPATVEVDIMVRSMGPISEVDMTYSMDCYFRQSW 61
Query: 261 IDKRLSWNAGEWGCSTWLVSSERLWRPDVVLLNAAAT---TAGDYALRARVSNNGSVSWI 431
+D+RL++ G+ + + R+W+PD N + T R+ +G V +
Sbjct: 62 VDRRLAFQGGKETLALSISMLARIWKPDTYFYNGKHSYLHTITSPNKFVRLYQDGRVLYS 121
Query: 432 KRLDISTPISMQLDNWPNDMQTWHVQ 509
RL I M L+N+P D Q +Q
Sbjct: 122 SRLTIKAGCPMNLENFPMDTQRCPLQ 147
>DQ026032-1|AAY87891.1| 566|Apis mellifera nicotinic acetylcholine
receptor alpha3subunit protein.
Length = 566
Score = 51.2 bits (117), Expect = 1e-08
Identities = 36/146 (24%), Positives = 64/146 (43%), Gaps = 9/146 (6%)
Frame = +3
Query: 87 CENATSLSLMIDSLLATYDRESPPDSKIVVNLTLHLR-------HANIRESESTVRILAD 245
C + D LL+ Y++ P + LT+ ++ N++ T +
Sbjct: 19 CSGNPDAKRLYDDLLSNYNKLVRPVVNVTDALTVKIKLKLSQLIDVNLKNQIMTTNLW-- 76
Query: 246 LQMNWIDKRLSWNAGEWGCSTWL-VSSERLWRPDVVLL-NAAATTAGDYALRARVSNNGS 419
++ +W D +L W+ E+G L V S+ +WRPD+VL NA A +A ++ G
Sbjct: 77 VEQSWYDYKLKWDPKEYGGVEMLHVPSDHIWRPDIVLYNNADGNFEVTLATKATLNYTGR 136
Query: 420 VSWIKRLDISTPISMQLDNWPNDMQT 497
V W + + ++ +P D QT
Sbjct: 137 VEWKPPAIYKSSCEIDVEYFPFDEQT 162
>DQ026031-1|AAY87890.1| 601|Apis mellifera nicotinic acetylcholine
receptor alpha1subunit protein.
Length = 601
Score = 50.0 bits (114), Expect = 3e-08
Identities = 40/159 (25%), Positives = 70/159 (44%), Gaps = 12/159 (7%)
Frame = +3
Query: 57 LTCAIASAAECENATSLSLMIDSLLATYDRESPP----DSKIVVNLTLHLRH---ANIRE 215
++C +A + + D LL+ Y+R P ++ V + L L N++
Sbjct: 5 ISCLVAPFPGASANSEAKRLYDDLLSNYNRLIRPVGNNSDRLTVKMGLRLSQLIDVNLKN 64
Query: 216 SESTVRILADLQMNWIDKRLSWNAGEWG-CSTWLVSSERLWRPDVVLLNAAATTAGDYAL 392
T + ++ W D +L WN ++G T V SE +W PD+VL N A G+Y +
Sbjct: 65 QIMTTNVW--VEQEWNDYKLKWNPDDYGGVDTLHVPSEHIWLPDIVLYNNA---DGNYEV 119
Query: 393 ----RARVSNNGSVSWIKRLDISTPISMQLDNWPNDMQT 497
+A + + G V W + + ++ +P D QT
Sbjct: 120 TIMTKAILHHTGKVVWKPPAIYKSFCEIDVEYFPFDEQT 158
>DQ026034-1|AAY87893.1| 569|Apis mellifera nicotinic acetylcholine
receptor alpha4subunit protein.
Length = 569
Score = 49.6 bits (113), Expect = 3e-08
Identities = 37/138 (26%), Positives = 70/138 (50%), Gaps = 10/138 (7%)
Frame = +3
Query: 114 MIDSLLATYDRESPP--DSKIVVNLTLHLRHANIRESESTVRILAD---LQMNWIDKRLS 278
+ D LL+ Y++ P ++ V+ + + L+ + + + +I+ ++ +W D +L
Sbjct: 32 LYDDLLSNYNKLVRPVVNTSDVLRVCIKLKLSQLIDVNLKNQIMTTNLWVEQSWYDYKLR 91
Query: 279 WNAGEWGCSTWL-VSSERLWRPDVVLLNAAATTAGDYAL----RARVSNNGSVSWIKRLD 443
W E+G L V S+ +WRPD+VL N A G+Y + +A V +G V W
Sbjct: 92 WEPKEYGGVKMLHVPSDHIWRPDIVLYNNA---DGNYEVTLMTKATVYYSGLVVWQPPAV 148
Query: 444 ISTPISMQLDNWPNDMQT 497
+ S+ ++ +P D+QT
Sbjct: 149 YKSSCSIDVEFFPYDVQT 166
>DQ026033-1|AAY87892.1| 569|Apis mellifera nicotinic acetylcholine
receptor alpha4subunit protein.
Length = 569
Score = 49.6 bits (113), Expect = 3e-08
Identities = 34/135 (25%), Positives = 65/135 (48%), Gaps = 7/135 (5%)
Frame = +3
Query: 114 MIDSLLATYDRESPP--DSKIVVNLTLHLRHANIRESESTVRILAD---LQMNWIDKRLS 278
+ D LL+ Y++ P ++ V+ + + L+ + + + +I+ ++ +W D +L
Sbjct: 32 LYDDLLSNYNKLVRPVVNTSDVLRVCIKLKLSQLIDVNLKNQIMTTNLWVEQSWYDYKLR 91
Query: 279 WNAGEWGCSTWL-VSSERLWRPDVVLL-NAAATTAGDYALRARVSNNGSVSWIKRLDIST 452
W E+G L V S+ +WRPD+VL NA A +A + + G V W +
Sbjct: 92 WEPKEYGGVKMLHVPSDHIWRPDIVLYNNADGNFEVTLATKATIYHQGLVEWKPPAIYKS 151
Query: 453 PISMQLDNWPNDMQT 497
+ ++ +P D QT
Sbjct: 152 SCEIDVEYFPFDEQT 166
>DQ026036-1|AAY87895.1| 529|Apis mellifera nicotinic acetylcholine
receptor alpha6subunit protein.
Length = 529
Score = 48.8 bits (111), Expect = 6e-08
Identities = 33/142 (23%), Positives = 67/142 (47%), Gaps = 7/142 (4%)
Frame = +3
Query: 114 MIDSLLATYDRESPP----DSKIVVNLTLHLRHA-NIRESESTVRILADLQMNWIDKRLS 278
+++ LL++Y+ P + V + L+ ++ E + A L++ W+D L
Sbjct: 58 LLNELLSSYNTLERPVANESEPLEVKFGITLQQIIDVDEKNQILTTNAWLKLEWVDYNLQ 117
Query: 279 WNAGEW-GCSTWLVSSERLWRPDVVLLNAA-ATTAGDYALRARVSNNGSVSWIKRLDIST 452
WN E+ G ++ +LW+PD+++ N+A G Y V++NGS ++ +
Sbjct: 118 WNESEYGGVKDLRITPNKLWKPDILMYNSADEGFDGTYQTNVVVTHNGSCLYVPPGIFKS 177
Query: 453 PISMQLDNWPNDMQTWHVQVRF 518
+ + +P D Q H ++F
Sbjct: 178 TCKIDITWFPFDDQ--HCDMKF 197
>DQ026035-1|AAY87894.1| 529|Apis mellifera nicotinic acetylcholine
receptor alpha6subunit protein.
Length = 529
Score = 48.8 bits (111), Expect = 6e-08
Identities = 33/142 (23%), Positives = 67/142 (47%), Gaps = 7/142 (4%)
Frame = +3
Query: 114 MIDSLLATYDRESPP----DSKIVVNLTLHLRHA-NIRESESTVRILADLQMNWIDKRLS 278
+++ LL++Y+ P + V + L+ ++ E + A L++ W+D L
Sbjct: 58 LLNELLSSYNTLERPVANESEPLEVKFGITLQQIIDVDEKNQILTTNAWLKLEWVDYNLQ 117
Query: 279 WNAGEW-GCSTWLVSSERLWRPDVVLLNAA-ATTAGDYALRARVSNNGSVSWIKRLDIST 452
WN E+ G ++ +LW+PD+++ N+A G Y V++NGS ++ +
Sbjct: 118 WNESEYGGVKDLRITPNKLWKPDILMYNSADEGFDGTYQTNVVVTHNGSCLYVPPGIFKS 177
Query: 453 PISMQLDNWPNDMQTWHVQVRF 518
+ + +P D Q H ++F
Sbjct: 178 TCKIDITWFPFDDQ--HCDMKF 197
>AF514804-1|AAM51823.1| 537|Apis mellifera neuronal nicotinic
acetylcholine receptoralpha-3 protein.
Length = 537
Score = 48.8 bits (111), Expect = 6e-08
Identities = 39/138 (28%), Positives = 64/138 (46%), Gaps = 10/138 (7%)
Frame = +3
Query: 114 MIDSLLATYDRESPPDSKIVVNLT--LHLRHANIRESESTVRILAD---LQMNWIDKRLS 278
+ D LL+ Y+R P LT L L+ + + E +++ ++ W D +L
Sbjct: 37 LYDDLLSNYNRLIRPVMNNTETLTVQLGLKLSQLIEMNLKNQVMTTNVWVEQRWNDYKLK 96
Query: 279 WNAGEWGCSTWL-VSSERLWRPDVVLLNAAATTAGDYAL----RARVSNNGSVSWIKRLD 443
WN E+G L V SE +W PD+VL N A G+Y + +A + G VSW
Sbjct: 97 WNPEEYGGVEMLYVPSENIWLPDIVLYNNA---DGNYEVTLMTKATLKYTGDVSWKPPAI 153
Query: 444 ISTPISMQLDNWPNDMQT 497
+ + ++ +P D Q+
Sbjct: 154 YKSSCEINVEYFPFDEQS 171
>EF127800-1|ABL67937.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 1 protein.
Length = 461
Score = 48.0 bits (109), Expect = 1e-07
Identities = 27/107 (25%), Positives = 52/107 (48%), Gaps = 2/107 (1%)
Frame = +3
Query: 204 NIRESESTVRILADLQMNWIDKRLSWNAGEW-GCSTWLVSSERLWRPDVVLLNAA-ATTA 377
++ E + A L++ W+D L WN E+ G ++ +LW+PD+++ N+A
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSADEGFD 84
Query: 378 GDYALRARVSNNGSVSWIKRLDISTPISMQLDNWPNDMQTWHVQVRF 518
G Y V++NGS ++ + + + +P D Q H ++F
Sbjct: 85 GTYQTSVVVTHNGSCLYVPPGIFKSTCKIDITWFPFDDQ--HCDMKF 129
>DQ667182-1|ABG75734.1| 445|Apis mellifera GABA-gated chloride
channel protein.
Length = 445
Score = 48.0 bits (109), Expect = 1e-07
Identities = 39/153 (25%), Positives = 73/153 (47%), Gaps = 13/153 (8%)
Frame = +3
Query: 93 NATSLSLMIDSLLATYDRESPPD---SKIVVNLTLH-LRHANIRESESTVRILADLQMNW 260
N ++S ++DS +YD+ P+ + V +T++ L +++ E + + + W
Sbjct: 8 NDVNISAILDSFSVSYDKRVRPNYGGPPVEVGVTMYVLSISSLSEVKMDFTLDFYFRQFW 67
Query: 261 IDKRLSWNAGEWGCSTWLVSSE---RLWRPDVVLLNAA------ATTAGDYALRARVSNN 413
D RL++ G T V SE +W PD +N ATT+ ++ R+ ++
Sbjct: 68 TDPRLAFKK-RTGVETLSVGSEFIKNIWVPDTFFVNEKQSYFHIATTSNEFI---RIHHS 123
Query: 414 GSVSWIKRLDISTPISMQLDNWPNDMQTWHVQV 512
GS++ RL I+ M L +P D Q H+++
Sbjct: 124 GSITRSIRLTITASCPMNLQYFPMDRQLCHIEI 156
>DQ026038-1|AAY87897.1| 520|Apis mellifera nicotinic acetylcholine
receptor beta1subunit protein.
Length = 520
Score = 48.0 bits (109), Expect = 1e-07
Identities = 30/117 (25%), Positives = 57/117 (48%), Gaps = 6/117 (5%)
Frame = +3
Query: 165 KIVVNLTL-HLRHANIRESESTVRILADLQMNWIDKRLSWNAGEWG-CSTWLVSSERLWR 338
K+ VN L ++ N+ E ++ L+ W D +L W+ ++G + +++W+
Sbjct: 51 KVHVNFGLAFVQLINVNEKNQIMKSNVWLRFIWTDYQLQWDEADYGGIGVLRLPPDKVWK 110
Query: 339 PDVVLLNAAATTAGDYALRAR----VSNNGSVSWIKRLDISTPISMQLDNWPNDMQT 497
PD+VL N A G+Y +R + + NG V W+ + ++ + +P D QT
Sbjct: 111 PDIVLFNNA---DGNYEVRYKSNVLIYPNGDVLWVPPAIYQSSCTIDVTYFPFDQQT 164
>EF127801-1|ABL67938.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 2 protein.
Length = 461
Score = 47.2 bits (107), Expect = 2e-07
Identities = 27/107 (25%), Positives = 52/107 (48%), Gaps = 2/107 (1%)
Frame = +3
Query: 204 NIRESESTVRILADLQMNWIDKRLSWNAGEW-GCSTWLVSSERLWRPDVVLLNAA-ATTA 377
++ E + A L++ W+D L WN E+ G ++ +LW+PD+++ N+A
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSADEGFD 84
Query: 378 GDYALRARVSNNGSVSWIKRLDISTPISMQLDNWPNDMQTWHVQVRF 518
G Y V+++GS ++ + M + +P D Q H ++F
Sbjct: 85 GTYQTSVVVTHDGSCLYVPPGIFKSTCKMDIAWFPFDDQ--HCDMKF 129
>EF127805-1|ABL67942.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 6 protein.
Length = 461
Score = 46.8 bits (106), Expect = 2e-07
Identities = 27/107 (25%), Positives = 52/107 (48%), Gaps = 2/107 (1%)
Frame = +3
Query: 204 NIRESESTVRILADLQMNWIDKRLSWNAGEW-GCSTWLVSSERLWRPDVVLLNAA-ATTA 377
++ E + A L++ W+D L WN E+ G ++ +LW+PD+++ N+A
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSADEGFD 84
Query: 378 GDYALRARVSNNGSVSWIKRLDISTPISMQLDNWPNDMQTWHVQVRF 518
G Y V+++GS ++ + M + +P D Q H ++F
Sbjct: 85 GTYQTSVVVTHDGSCLYVPPGIFKSTCKMDVAWFPFDDQ--HCDMKF 129
>DQ667181-1|ABG75733.1| 445|Apis mellifera GABA-gated chloride
channel protein.
Length = 445
Score = 46.8 bits (106), Expect = 2e-07
Identities = 39/153 (25%), Positives = 72/153 (47%), Gaps = 13/153 (8%)
Frame = +3
Query: 93 NATSLSLMIDSLLATYDRESPPD---SKIVVNLTLH-LRHANIRESESTVRILADLQMNW 260
N ++S ++DS +YD+ P+ + V +T++ L +++ E + + W
Sbjct: 8 NDVNISAILDSFSVSYDKRVRPNYGGPPVEVGVTMYVLSISSVSEVLMDFTLDFYFRQFW 67
Query: 261 IDKRLSWNAGEWGCSTWLVSSE---RLWRPDVVLLNAA------ATTAGDYALRARVSNN 413
D RL++ G T V SE +W PD +N ATT+ ++ R+ ++
Sbjct: 68 TDPRLAFKK-RTGVETLSVGSEFIKNIWVPDTFFVNEKQSYFHIATTSNEFI---RIHHS 123
Query: 414 GSVSWIKRLDISTPISMQLDNWPNDMQTWHVQV 512
GS++ RL I+ M L +P D Q H+++
Sbjct: 124 GSITRSIRLTITASCPMNLQYFPMDRQLCHIEI 156
>DQ667193-1|ABG75745.1| 510|Apis mellifera cys-loop ligand-gated
ion channel subunit protein.
Length = 510
Score = 46.4 bits (105), Expect = 3e-07
Identities = 33/140 (23%), Positives = 62/140 (44%), Gaps = 8/140 (5%)
Frame = +3
Query: 102 SLSLMIDSLLATYDRESPPD----SKIVVNLTLHLRHAN-IRESESTVRILADLQMNWID 266
++++++++LL Y+ P + VV + +R + E + + + +W D
Sbjct: 36 NITMVLENLLMNYENNQLPTHGKGTPTVVKTNILIRSMGPVSELDMDYSMDCYFRQSWRD 95
Query: 267 KRLSWNAGEWGCSTWLVSSERLWRPDVVLLNAAATTAGDYAL---RARVSNNGSVSWIKR 437
RLS+ S + ER+WRPD N + + R+S +G + + R
Sbjct: 96 SRLSFLGPIKSLSLSIKMLERIWRPDTYFYNGKHSYVHTITVPNKLLRISQDGDILYSMR 155
Query: 438 LDISTPISMQLDNWPNDMQT 497
L I M+L N+P D Q+
Sbjct: 156 LTIKAKCPMELRNFPMDRQS 175
>EF127803-1|ABL67940.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 4 protein.
Length = 461
Score = 46.0 bits (104), Expect = 4e-07
Identities = 26/107 (24%), Positives = 52/107 (48%), Gaps = 2/107 (1%)
Frame = +3
Query: 204 NIRESESTVRILADLQMNWIDKRLSWNAGEW-GCSTWLVSSERLWRPDVVLLNAA-ATTA 377
++ E + A L++ W+D L WN E+ G ++ +LW+PD+++ N+A
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSADEGFD 84
Query: 378 GDYALRARVSNNGSVSWIKRLDISTPISMQLDNWPNDMQTWHVQVRF 518
G Y V+++GS ++ + + + +P D Q H ++F
Sbjct: 85 GTYQTSVVVTHDGSCLYVPPGIFKSTCKIDITWFPFDDQ--HCDMKF 129
>AY569781-1|AAS75781.1| 461|Apis mellifera neuronal nicotinic
acetylcholine Apisa7-2 subunit protein.
Length = 461
Score = 46.0 bits (104), Expect = 4e-07
Identities = 30/112 (26%), Positives = 47/112 (41%), Gaps = 3/112 (2%)
Frame = +3
Query: 168 IVVNLTLHLRHANIRESESTVRILADLQMNWIDKRLSWNAGEW-GCSTWLVSSERLWRPD 344
+V L+LH ++ E + + W D L WNA E+ G V R+WRPD
Sbjct: 33 VVFGLSLH-HIIDVDEKNQILTTNCWVTQIWTDHHLKWNASEFAGIRVIRVPYNRVWRPD 91
Query: 345 VVLLNAAATTAGDYALRAR--VSNNGSVSWIKRLDISTPISMQLDNWPNDMQ 494
+L N A + VS+ G V W+ + + ++ +P D Q
Sbjct: 92 TILYNNADPQYSSAVINTNVIVSHTGEVVWLSHGIFRSSCDIDVEFFPFDEQ 143
>EF127804-1|ABL67941.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 5 protein.
Length = 461
Score = 45.6 bits (103), Expect = 6e-07
Identities = 26/107 (24%), Positives = 52/107 (48%), Gaps = 2/107 (1%)
Frame = +3
Query: 204 NIRESESTVRILADLQMNWIDKRLSWNAGEW-GCSTWLVSSERLWRPDVVLLNAA-ATTA 377
++ E + A L++ W+D L WN E+ G ++ +LW+PD+++ N+A
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSADEGFD 84
Query: 378 GDYALRARVSNNGSVSWIKRLDISTPISMQLDNWPNDMQTWHVQVRF 518
G Y V+++GS ++ + + + +P D Q H ++F
Sbjct: 85 GTYQTSVVVTHDGSCLYVPPGIFKSTCKIDIAWFPFDDQ--HCDMKF 129
>EF127802-1|ABL67939.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 3 protein.
Length = 461
Score = 45.6 bits (103), Expect = 6e-07
Identities = 26/107 (24%), Positives = 52/107 (48%), Gaps = 2/107 (1%)
Frame = +3
Query: 204 NIRESESTVRILADLQMNWIDKRLSWNAGEW-GCSTWLVSSERLWRPDVVLLNAA-ATTA 377
++ E + A L++ W+D L WN E+ G ++ +LW+PD+++ N+A
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSADEGFD 84
Query: 378 GDYALRARVSNNGSVSWIKRLDISTPISMQLDNWPNDMQTWHVQVRF 518
G Y V+++GS ++ + + + +P D Q H ++F
Sbjct: 85 GTYQTSVVVTHDGSCLYVPPGIFGSTCKIDIAWFPFDDQ--HCDMKF 129
>DQ026039-1|AAY87898.1| 427|Apis mellifera nicotinic acetylcholine
receptor beta2subunit protein.
Length = 427
Score = 45.2 bits (102), Expect = 7e-07
Identities = 27/95 (28%), Positives = 47/95 (49%), Gaps = 6/95 (6%)
Frame = +3
Query: 87 CENATSLSLMIDS---LLATYDRESPPDSKIV--VNLTLHLRHANIRESESTVRILADLQ 251
C++ TS S + L YDR+ P+ K ++ L ++H N+ E TV L+
Sbjct: 28 CKDITSTSALYRLKLYLFCDYDRDIIPEQKNATKIDFGLSIQHYNVDEYSHTVDFHVMLK 87
Query: 252 MNWIDKRLSWNAGEW-GCSTWLVSSERLWRPDVVL 353
+ W L+W + E+ ++ V S +W PD+V+
Sbjct: 88 LMWEQSHLTWKSSEFDSINSIRVKSYEIWVPDIVM 122
>AY500239-1|AAR92109.1| 555|Apis mellifera neuronal nicotinic
acetylcholine receptoralpha7-1 protein.
Length = 555
Score = 44.8 bits (101), Expect = 1e-06
Identities = 33/136 (24%), Positives = 64/136 (47%), Gaps = 7/136 (5%)
Frame = +3
Query: 45 YXFLLTCAIASAAECENATSLSLMIDSLLATYD-RESPPDSK---IVVNLTLHLRHA-NI 209
+ + A+A++ + +++ LL TY+ E P ++ +V++ L L ++
Sbjct: 4 WTLMAAIALAASGLVNGGSHEKRLLNDLLDTYNVLERPVGNESEPLVLSFGLTLMQIIDV 63
Query: 210 RESESTVRILADLQMNWIDKRLSWNAGEWGCSTWL-VSSERLWRPDVVLLNAA-ATTAGD 383
E + L++ W D + WN ++G L + RLW+PDV++ N+A G
Sbjct: 64 DEKNQLLITNLWLKLEWNDVNMRWNVSDYGGVRDLRIPPHRLWKPDVLMYNSADEGFDGT 123
Query: 384 YALRARVSNNGSVSWI 431
Y V NNG+ ++
Sbjct: 124 YPTNVVVKNNGTCLYV 139
>AF094822-1|AAC63381.1| 365|Apis mellifera GABA receptor Rdl
subunit protein.
Length = 365
Score = 39.1 bits (87), Expect = 5e-05
Identities = 28/94 (29%), Positives = 45/94 (47%), Gaps = 9/94 (9%)
Frame = +3
Query: 258 WIDKRLSWNAGEWGCSTWLVSSE---RLWRPDVVLLNAA------ATTAGDYALRARVSN 410
W D RL++ G T V SE +W PD +N ATT+ ++ R+ +
Sbjct: 6 WTDPRLAFKK-RTGVETLSVGSEFIKNIWVPDTFFVNEKQSYFHIATTSNEFI---RIHH 61
Query: 411 NGSVSWIKRLDISTPISMQLDNWPNDMQTWHVQV 512
+GS++ RL I+ M L +P D Q H+++
Sbjct: 62 SGSITRSIRLTITASCPMNLQYFPMDRQLCHIEI 95
>DQ667194-1|ABG75746.1| 391|Apis mellifera cys-loop ligand-gated
ion channel subunit protein.
Length = 391
Score = 24.6 bits (51), Expect = 1.1
Identities = 26/120 (21%), Positives = 51/120 (42%), Gaps = 11/120 (9%)
Frame = +3
Query: 168 IVVNLTLHLRHAN-IRESESTVRILADLQMNWIDKRLS-----WNAGEWGCSTWLVSSER 329
++V+ + + N I + R+ ++ +WI+ RL + G+ + +
Sbjct: 11 VLVDFNIFVADINSINVEDMDFRVDMFVRQSWIESRLDMPDYIFEEGDDYVTLPPEFFDS 70
Query: 330 LWRPDVVLLNAAATTAGDYALRARVSN-----NGSVSWIKRLDISTPISMQLDNWPNDMQ 494
LW+PD LNA + AL + S+ N +V + R+ M+ +P D+Q
Sbjct: 71 LWQPDPYFLNAKVSEIA--ALNHKFSSVTLYRNKTVKYSARMHAIIACQMEFQLYPMDIQ 128
>DQ026037-1|AAY87896.1| 431|Apis mellifera nicotinic acetylcholine
receptor alpha9subunit protein.
Length = 431
Score = 24.2 bits (50), Expect = 1.5
Identities = 10/29 (34%), Positives = 19/29 (65%)
Frame = +1
Query: 490 CRLGTFKFGSRMHNSDEMDFVIDKRIYSM 576
CR+ FGS +H+ +E++ +DK+ + M
Sbjct: 183 CRIN---FGSWVHSGEEVNIFLDKKGFHM 208
>AB161182-1|BAD08344.1| 1040|Apis mellifera metabotropic glutamate
receptor protein.
Length = 1040
Score = 23.0 bits (47), Expect = 3.4
Identities = 10/26 (38%), Positives = 13/26 (50%)
Frame = -1
Query: 110 GQ*CCVFAFCRTSYSTSEEKXVTRII 33
G+ CC F T Y + K VT+ I
Sbjct: 602 GEQCCWHCFNCTQYQIRDHKDVTQCI 627
>DQ667187-1|ABG75739.1| 428|Apis mellifera histamine-gated chloride
channel protein.
Length = 428
Score = 22.6 bits (46), Expect = 4.6
Identities = 13/66 (19%), Positives = 30/66 (45%), Gaps = 3/66 (4%)
Frame = +3
Query: 324 ERLWRPDVVLLNAAATTAGDYALRAR---VSNNGSVSWIKRLDISTPISMQLDNWPNDMQ 494
+ +WRPD NA + T + + + ++ ++ +L + +M +P+D Q
Sbjct: 116 KNMWRPDSFFKNAKSVTFQTMTIPNHYLWLYKDKTILYMVKLTLKLSCAMNFLIYPHDTQ 175
Query: 495 TWHVQV 512
+Q+
Sbjct: 176 ECKLQM 181
>AB270697-1|BAF75928.1| 735|Apis mellifera FoxP protein protein.
Length = 735
Score = 21.8 bits (44), Expect = 8.0
Identities = 8/14 (57%), Positives = 9/14 (64%)
Frame = -1
Query: 311 PSAAAPFPCVPTQS 270
PSA AP P +P S
Sbjct: 411 PSAGAPMPPIPNMS 424
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 231,701
Number of Sequences: 438
Number of extensions: 5756
Number of successful extensions: 70
Number of sequences better than 10.0: 28
Number of HSP's better than 10.0 without gapping: 46
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 49
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 26460186
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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