Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP11_FL5_M10
(902 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr 3|||... 38 0.003
SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr 1... 37 0.003
SPAC4F8.12c |spp42|cwf6|U5 snRNP complex subunit Spp42|Schizosac... 34 0.032
SPCC306.09c |cap1|cap|adenylyl cyclase-associated protein Cap1|S... 29 0.22
SPAC1F5.04c |cdc12||formin Cdc12|Schizosaccharomyces pombe|chr 1... 29 0.26
SPBC660.06 |||conserved fungal protein|Schizosaccharomyces pombe... 27 2.8
SPBC146.13c |myo1||myosin type I|Schizosaccharomyces pombe|chr 2... 27 2.8
SPBC557.04 |ppk29||Ark1/Prk1 family protein kinase Ppk29|Schizos... 23 3.6
SPCC1494.10 ||SPCC70.01|transcription factor |Schizosaccharomyce... 27 3.6
SPAC16E8.01 |||cytoskeletal protein binding protein Sla1 family ... 27 4.4
SPAC29B12.07 |sec16||multidomain vesicle coat component Sec16|Sc... 27 4.8
SPBC13E7.03c |||RNA hairpin binding protein |Schizosaccharomyces... 27 4.8
>SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr
3|||Manual
Length = 1461
Score = 37.5 bits (83), Expect = 0.003
Identities = 18/33 (54%), Positives = 18/33 (54%)
Frame = +3
Query: 681 GXPPPPPPPPXXXXGXGGGGGXXXXXXPPPPPP 779
G PPPPPPPP G G G PPPPPP
Sbjct: 759 GGPPPPPPPP----GVAGAG----PPPPPPPPP 783
Score = 29.5 bits (63), Expect = 0.68
Identities = 10/15 (66%), Positives = 10/15 (66%)
Frame = +3
Query: 681 GXPPPPPPPPXXXXG 725
G PPPPPPPP G
Sbjct: 774 GPPPPPPPPPAVSAG 788
Score = 27.9 bits (59), Expect = 2.1
Identities = 10/18 (55%), Positives = 10/18 (55%)
Frame = +3
Query: 681 GXPPPPPPPPXXXXGXGG 734
G PPPPPPP GG
Sbjct: 772 GAGPPPPPPPPPAVSAGG 789
Score = 26.6 bits (56), Expect = 4.8
Identities = 9/15 (60%), Positives = 9/15 (60%)
Frame = -3
Query: 744 PPPPPPPXXXXXGGG 700
PPPPPPP GG
Sbjct: 775 PPPPPPPPPAVSAGG 789
>SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr
1|||Manual
Length = 574
Score = 37.1 bits (82), Expect = 0.003
Identities = 16/32 (50%), Positives = 16/32 (50%), Gaps = 1/32 (3%)
Frame = +3
Query: 687 PPPPPPPPXXXXGXGG-GGGXXXXXXPPPPPP 779
PPPPPPP G G G PPPPPP
Sbjct: 311 PPPPPPPSRRNRGKPPIGNGSSNSSLPPPPPP 342
Score = 33.9 bits (74), Expect = 0.032
Identities = 15/33 (45%), Positives = 15/33 (45%), Gaps = 4/33 (12%)
Frame = +1
Query: 694 PPPPPPXXXXGXG----GGGGXXXXXXPPPPPP 780
PPPPPP G G G PPPPPP
Sbjct: 311 PPPPPPPSRRNRGKPPIGNGSSNSSLPPPPPPP 343
Score = 33.9 bits (74), Expect = 0.032
Identities = 15/32 (46%), Positives = 15/32 (46%), Gaps = 1/32 (3%)
Frame = +1
Query: 688 PXPPPPPPXXXXGXGG-GGGXXXXXXPPPPPP 780
P PPPPP G G G PPPPPP
Sbjct: 311 PPPPPPPSRRNRGKPPIGNGSSNSSLPPPPPP 342
Score = 28.3 bits (60), Expect = 1.6
Identities = 13/36 (36%), Positives = 13/36 (36%)
Frame = +3
Query: 669 KKXXGXPPPPPPPPXXXXGXGGGGGXXXXXXPPPPP 776
KK PPPP G G PPPPP
Sbjct: 308 KKRPPPPPPPSRRNRGKPPIGNGSSNSSLPPPPPPP 343
Score = 26.6 bits (56), Expect = 4.8
Identities = 15/45 (33%), Positives = 15/45 (33%)
Frame = +2
Query: 644 GXXPXXXKKKXXXXPPXPPPPPXXXXXGGGGGGGXXXXXXPPPPP 778
G P PP PPPPP G PPPPP
Sbjct: 323 GKPPIGNGSSNSSLPP-PPPPPRSNAAGSIPLPPQGRSAPPPPPP 366
Score = 26.6 bits (56), Expect = 4.8
Identities = 10/22 (45%), Positives = 10/22 (45%)
Frame = -3
Query: 771 GGGXXXXXXPPPPPPPXXXXXG 706
G G PPPPPPP G
Sbjct: 328 GNGSSNSSLPPPPPPPRSNAAG 349
Score = 23.4 bits (48), Expect(2) = 6.2
Identities = 8/16 (50%), Positives = 8/16 (50%)
Frame = -3
Query: 774 GGGGXXXXXXPPPPPP 727
G G PPPPPP
Sbjct: 328 GNGSSNSSLPPPPPPP 343
Score = 21.0 bits (42), Expect(2) = 6.2
Identities = 6/6 (100%), Positives = 6/6 (100%)
Frame = -3
Query: 741 PPPPPP 724
PPPPPP
Sbjct: 361 PPPPPP 366
>SPAC4F8.12c |spp42|cwf6|U5 snRNP complex subunit
Spp42|Schizosaccharomyces pombe|chr 1|||Manual
Length = 2363
Score = 33.9 bits (74), Expect = 0.032
Identities = 16/33 (48%), Positives = 16/33 (48%)
Frame = +3
Query: 681 GXPPPPPPPPXXXXGXGGGGGXXXXXXPPPPPP 779
G PPPPPPPP G PPPPPP
Sbjct: 7 GNPPPPPPPP----------GFEPPSQPPPPPP 29
Score = 28.7 bits (61), Expect = 1.2
Identities = 14/31 (45%), Positives = 14/31 (45%)
Frame = +1
Query: 688 PXPPPPPPXXXXGXGGGGGXXXXXXPPPPPP 780
P PPPPPP G PPPPPP
Sbjct: 9 PPPPPPPP----------GFEPPSQPPPPPP 29
>SPCC306.09c |cap1|cap|adenylyl cyclase-associated protein
Cap1|Schizosaccharomyces pombe|chr 3|||Manual
Length = 551
Score = 28.7 bits (61), Expect(2) = 0.22
Identities = 9/10 (90%), Positives = 9/10 (90%)
Frame = +3
Query: 681 GXPPPPPPPP 710
G PPPPPPPP
Sbjct: 304 GLPPPPPPPP 313
Score = 26.6 bits (56), Expect = 4.8
Identities = 8/8 (100%), Positives = 8/8 (100%)
Frame = +3
Query: 687 PPPPPPPP 710
PPPPPPPP
Sbjct: 307 PPPPPPPP 314
Score = 24.6 bits (51), Expect(2) = 2.9
Identities = 8/10 (80%), Positives = 8/10 (80%)
Frame = +3
Query: 681 GXPPPPPPPP 710
G PPPPPPP
Sbjct: 303 GGLPPPPPPP 312
Score = 21.0 bits (42), Expect(2) = 2.9
Identities = 6/6 (100%), Positives = 6/6 (100%)
Frame = +3
Query: 762 PPPPPP 779
PPPPPP
Sbjct: 308 PPPPPP 313
Score = 21.0 bits (42), Expect(2) = 0.22
Identities = 6/6 (100%), Positives = 6/6 (100%)
Frame = +3
Query: 762 PPPPPP 779
PPPPPP
Sbjct: 309 PPPPPP 314
>SPAC1F5.04c |cdc12||formin Cdc12|Schizosaccharomyces pombe|chr
1|||Manual
Length = 1841
Score = 29.5 bits (63), Expect = 0.68
Identities = 10/16 (62%), Positives = 10/16 (62%)
Frame = +3
Query: 687 PPPPPPPPXXXXGXGG 734
PPPPPPPP GG
Sbjct: 945 PPPPPPPPPLVSAAGG 960
Score = 26.6 bits (56), Expect = 4.8
Identities = 9/16 (56%), Positives = 9/16 (56%)
Frame = -3
Query: 744 PPPPPPPXXXXXGGGG 697
PPPPPPP GG
Sbjct: 945 PPPPPPPPPLVSAAGG 960
Score = 26.6 bits (56), Expect(2) = 0.26
Identities = 9/16 (56%), Positives = 9/16 (56%)
Frame = +3
Query: 690 PPPPPPPXXXXGXGGG 737
PPPPPPP GG
Sbjct: 945 PPPPPPPPPLVSAAGG 960
Score = 23.8 bits (49), Expect(2) = 0.94
Identities = 8/15 (53%), Positives = 8/15 (53%)
Frame = +1
Query: 694 PPPPPPXXXXGXGGG 738
PPPPPP GG
Sbjct: 946 PPPPPPPPLVSAAGG 960
Score = 23.4 bits (48), Expect(2) = 5.6
Identities = 7/8 (87%), Positives = 7/8 (87%)
Frame = +3
Query: 687 PPPPPPPP 710
P PPPPPP
Sbjct: 905 PTPPPPPP 912
Score = 23.4 bits (48), Expect(2) = 0.94
Identities = 7/8 (87%), Positives = 7/8 (87%)
Frame = +1
Query: 688 PXPPPPPP 711
P PPPPPP
Sbjct: 905 PTPPPPPP 912
Score = 22.6 bits (46), Expect(2) = 0.26
Identities = 7/8 (87%), Positives = 7/8 (87%)
Frame = +3
Query: 687 PPPPPPPP 710
PPPPPP P
Sbjct: 907 PPPPPPLP 914
Score = 21.0 bits (42), Expect(2) = 5.6
Identities = 6/6 (100%), Positives = 6/6 (100%)
Frame = +3
Query: 762 PPPPPP 779
PPPPPP
Sbjct: 948 PPPPPP 953
>SPBC660.06 |||conserved fungal protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 273
Score = 27.5 bits (58), Expect = 2.8
Identities = 13/29 (44%), Positives = 13/29 (44%)
Frame = -2
Query: 775 GGGGGXXXXXXPPPPPXPXXXXGGGGGGG 689
GGG G PPP P G GG GG
Sbjct: 187 GGGFGGFGGGSGGPPPGPGGFGGFGGFGG 215
Score = 27.5 bits (58), Expect = 2.8
Identities = 13/30 (43%), Positives = 13/30 (43%)
Frame = -3
Query: 777 GGGGGXXXXXXPPPPPPPXXXXXGGGGGXG 688
GG GG PPP P GG GG G
Sbjct: 188 GGFGGFGGGSGGPPPGPGGFGGFGGFGGEG 217
Score = 25.8 bits (54), Expect = 8.4
Identities = 13/31 (41%), Positives = 13/31 (41%)
Frame = -1
Query: 779 GGGGGGXXXXXXPPPPPXPXXXXGGGGGGXG 687
GGG GG PPP GG GG G
Sbjct: 187 GGGFGGFGGGSGGPPPGPGGFGGFGGFGGEG 217
>SPBC146.13c |myo1||myosin type I|Schizosaccharomyces pombe|chr
2|||Manual
Length = 1217
Score = 27.5 bits (58), Expect = 2.8
Identities = 9/13 (69%), Positives = 9/13 (69%)
Frame = +3
Query: 672 KXXGXPPPPPPPP 710
K PPPPPPPP
Sbjct: 1090 KPSAVPPPPPPPP 1102
>SPBC557.04 |ppk29||Ark1/Prk1 family protein kinase
Ppk29|Schizosaccharomyces pombe|chr 2|||Manual
Length = 872
Score = 23.0 bits (47), Expect(2) = 3.6
Identities = 7/8 (87%), Positives = 7/8 (87%)
Frame = +3
Query: 687 PPPPPPPP 710
PPPPPP P
Sbjct: 356 PPPPPPMP 363
Score = 22.2 bits (45), Expect(2) = 3.6
Identities = 7/9 (77%), Positives = 7/9 (77%)
Frame = +3
Query: 681 GXPPPPPPP 707
G PPPPPP
Sbjct: 353 GSRPPPPPP 361
>SPCC1494.10 ||SPCC70.01|transcription factor |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 964
Score = 27.1 bits (57), Expect = 3.6
Identities = 9/22 (40%), Positives = 12/22 (54%)
Frame = -2
Query: 82 SFPQGXGPNQVXXRKGIFPQXP 17
++P G GPN R G +P P
Sbjct: 323 TYPAGMGPNPTAARNGFYPPTP 344
>SPAC16E8.01 |||cytoskeletal protein binding protein Sla1 family
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1420
Score = 26.6 bits (56), Expect = 4.8
Identities = 8/8 (100%), Positives = 8/8 (100%)
Frame = +3
Query: 687 PPPPPPPP 710
PPPPPPPP
Sbjct: 189 PPPPPPPP 196
Score = 26.6 bits (56), Expect = 4.8
Identities = 8/8 (100%), Positives = 8/8 (100%)
Frame = +3
Query: 687 PPPPPPPP 710
PPPPPPPP
Sbjct: 190 PPPPPPPP 197
Score = 23.8 bits (49), Expect(2) = 4.4
Identities = 8/14 (57%), Positives = 9/14 (64%)
Frame = +3
Query: 669 KKXXGXPPPPPPPP 710
K+ P PPPPPP
Sbjct: 230 KQADPLPAPPPPPP 243
Score = 23.4 bits (48), Expect(2) = 5.7
Identities = 7/8 (87%), Positives = 7/8 (87%)
Frame = +1
Query: 688 PXPPPPPP 711
P PPPPPP
Sbjct: 189 PPPPPPPP 196
Score = 21.0 bits (42), Expect(2) = 5.7
Identities = 6/6 (100%), Positives = 6/6 (100%)
Frame = +1
Query: 763 PPPPPP 780
PPPPPP
Sbjct: 192 PPPPPP 197
Score = 21.0 bits (42), Expect(2) = 4.4
Identities = 6/6 (100%), Positives = 6/6 (100%)
Frame = +3
Query: 762 PPPPPP 779
PPPPPP
Sbjct: 239 PPPPPP 244
>SPAC29B12.07 |sec16||multidomain vesicle coat component
Sec16|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1995
Score = 26.6 bits (56), Expect = 4.8
Identities = 11/29 (37%), Positives = 11/29 (37%)
Frame = +3
Query: 693 PPPPPPXXXXGXGGGGGXXXXXXPPPPPP 779
PPPPPP G PP PP
Sbjct: 1882 PPPPPPMALPKAGPPSAAPTSALPPAGPP 1910
Score = 26.6 bits (56), Expect = 4.8
Identities = 11/29 (37%), Positives = 11/29 (37%)
Frame = +1
Query: 694 PPPPPPXXXXGXGGGGGXXXXXXPPPPPP 780
PPPPPP G PP PP
Sbjct: 1882 PPPPPPMALPKAGPPSAAPTSALPPAGPP 1910
>SPBC13E7.03c |||RNA hairpin binding protein |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 713
Score = 26.6 bits (56), Expect = 4.8
Identities = 8/8 (100%), Positives = 8/8 (100%)
Frame = +3
Query: 687 PPPPPPPP 710
PPPPPPPP
Sbjct: 370 PPPPPPPP 377
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.315 0.150 0.503
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,748,084
Number of Sequences: 5004
Number of extensions: 29279
Number of successful extensions: 391
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 33
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 204
length of database: 2,362,478
effective HSP length: 72
effective length of database: 2,002,190
effective search space used: 456499320
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.8 bits)
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