Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP11_FL5_M10
(902 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor pr... 27 0.31
AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein. 25 0.71
DQ869053-1|ABJ09600.1| 459|Apis mellifera capa-like receptor pr... 23 2.9
DQ667187-1|ABG75739.1| 428|Apis mellifera histamine-gated chlor... 23 2.9
DQ325113-1|ABD14127.1| 185|Apis mellifera complementary sex det... 23 5.0
DQ325112-1|ABD14126.1| 185|Apis mellifera complementary sex det... 23 5.0
DQ325111-1|ABD14125.1| 185|Apis mellifera complementary sex det... 23 5.0
DQ325110-1|ABD14124.1| 185|Apis mellifera complementary sex det... 23 5.0
DQ325109-1|ABD14123.1| 177|Apis mellifera complementary sex det... 22 6.7
DQ325108-1|ABD14122.1| 177|Apis mellifera complementary sex det... 22 6.7
DQ325106-1|ABD14120.1| 177|Apis mellifera complementary sex det... 22 6.7
AY350615-1|AAQ57657.1| 410|Apis mellifera complementary sex det... 22 6.7
>AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor
protein.
Length = 1370
Score = 26.6 bits (56), Expect = 0.31
Identities = 8/8 (100%), Positives = 8/8 (100%)
Frame = +3
Query: 687 PPPPPPPP 710
PPPPPPPP
Sbjct: 1355 PPPPPPPP 1362
Score = 23.8 bits (49), Expect = 2.2
Identities = 7/7 (100%), Positives = 7/7 (100%)
Frame = -3
Query: 744 PPPPPPP 724
PPPPPPP
Sbjct: 1355 PPPPPPP 1361
Score = 23.8 bits (49), Expect = 2.2
Identities = 7/7 (100%), Positives = 7/7 (100%)
Frame = -3
Query: 744 PPPPPPP 724
PPPPPPP
Sbjct: 1356 PPPPPPP 1362
Score = 23.4 bits (48), Expect = 2.9
Identities = 7/8 (87%), Positives = 7/8 (87%)
Frame = +1
Query: 688 PXPPPPPP 711
P PPPPPP
Sbjct: 1355 PPPPPPPP 1362
Score = 21.8 bits (44), Expect = 8.8
Identities = 7/11 (63%), Positives = 7/11 (63%)
Frame = +3
Query: 693 PPPPPPXXXXG 725
PPPPPP G
Sbjct: 1355 PPPPPPPPSSG 1365
Score = 21.8 bits (44), Expect = 8.8
Identities = 7/11 (63%), Positives = 7/11 (63%)
Frame = +1
Query: 694 PPPPPPXXXXG 726
PPPPPP G
Sbjct: 1355 PPPPPPPPSSG 1365
>AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.
Length = 1946
Score = 25.4 bits (53), Expect = 0.71
Identities = 8/10 (80%), Positives = 8/10 (80%)
Frame = +3
Query: 681 GXPPPPPPPP 710
G P PPPPPP
Sbjct: 1855 GSPEPPPPPP 1864
Score = 23.4 bits (48), Expect = 2.9
Identities = 7/8 (87%), Positives = 7/8 (87%)
Frame = +1
Query: 688 PXPPPPPP 711
P PPPPPP
Sbjct: 1857 PEPPPPPP 1864
>DQ869053-1|ABJ09600.1| 459|Apis mellifera capa-like receptor
protein.
Length = 459
Score = 23.4 bits (48), Expect = 2.9
Identities = 7/13 (53%), Positives = 9/13 (69%)
Frame = +2
Query: 134 LAGFWAQFPXPWG 172
L+ FW Q+P WG
Sbjct: 91 LSVFWQQYPWQWG 103
>DQ667187-1|ABG75739.1| 428|Apis mellifera histamine-gated chloride
channel protein.
Length = 428
Score = 23.4 bits (48), Expect = 2.9
Identities = 7/8 (87%), Positives = 7/8 (87%)
Frame = +3
Query: 687 PPPPPPPP 710
P PPPPPP
Sbjct: 341 PAPPPPPP 348
Score = 23.4 bits (48), Expect = 2.9
Identities = 7/8 (87%), Positives = 7/8 (87%)
Frame = +1
Query: 688 PXPPPPPP 711
P PPPPPP
Sbjct: 341 PAPPPPPP 348
>DQ325113-1|ABD14127.1| 185|Apis mellifera complementary sex
determiner protein.
Length = 185
Score = 22.6 bits (46), Expect = 5.0
Identities = 10/29 (34%), Positives = 16/29 (55%)
Frame = +1
Query: 82 NPNSNGKKKLVPXXIRFXGRVLGPIPPPL 168
N N+N KKL I + ++ P+P P+
Sbjct: 101 NYNNNNYKKLQYYNINYIEQIPIPVPVPI 129
>DQ325112-1|ABD14126.1| 185|Apis mellifera complementary sex
determiner protein.
Length = 185
Score = 22.6 bits (46), Expect = 5.0
Identities = 10/29 (34%), Positives = 16/29 (55%)
Frame = +1
Query: 82 NPNSNGKKKLVPXXIRFXGRVLGPIPPPL 168
N N+N KKL I + ++ P+P P+
Sbjct: 101 NYNNNNYKKLQYYNINYIEQIPIPVPVPI 129
>DQ325111-1|ABD14125.1| 185|Apis mellifera complementary sex
determiner protein.
Length = 185
Score = 22.6 bits (46), Expect = 5.0
Identities = 10/29 (34%), Positives = 16/29 (55%)
Frame = +1
Query: 82 NPNSNGKKKLVPXXIRFXGRVLGPIPPPL 168
N N+N KKL I + ++ P+P P+
Sbjct: 101 NYNNNNYKKLQYYNINYIEQIPIPVPVPI 129
>DQ325110-1|ABD14124.1| 185|Apis mellifera complementary sex
determiner protein.
Length = 185
Score = 22.6 bits (46), Expect = 5.0
Identities = 10/29 (34%), Positives = 16/29 (55%)
Frame = +1
Query: 82 NPNSNGKKKLVPXXIRFXGRVLGPIPPPL 168
N N+N KKL I + ++ P+P P+
Sbjct: 101 NYNNNNYKKLQYYNINYIEQIPIPVPVPI 129
>DQ325109-1|ABD14123.1| 177|Apis mellifera complementary sex
determiner protein.
Length = 177
Score = 22.2 bits (45), Expect = 6.7
Identities = 12/44 (27%), Positives = 21/44 (47%)
Frame = +1
Query: 88 NSNGKKKLVPXXIRFXGRVLGPIPPPLGAKGXXLFFPKXPPXKM 219
N+N KKL I + ++ P+P P+ +++ PP M
Sbjct: 93 NNNNYKKLQYYNINYIEQIPVPVPVPV-----PVYYGNFPPRSM 131
>DQ325108-1|ABD14122.1| 177|Apis mellifera complementary sex
determiner protein.
Length = 177
Score = 22.2 bits (45), Expect = 6.7
Identities = 12/44 (27%), Positives = 21/44 (47%)
Frame = +1
Query: 88 NSNGKKKLVPXXIRFXGRVLGPIPPPLGAKGXXLFFPKXPPXKM 219
N+N KKL I + ++ P+P P+ +++ PP M
Sbjct: 93 NNNNYKKLQYYNINYIEQIPVPVPVPV-----PVYYGNFPPRSM 131
>DQ325106-1|ABD14120.1| 177|Apis mellifera complementary sex
determiner protein.
Length = 177
Score = 22.2 bits (45), Expect = 6.7
Identities = 12/44 (27%), Positives = 21/44 (47%)
Frame = +1
Query: 88 NSNGKKKLVPXXIRFXGRVLGPIPPPLGAKGXXLFFPKXPPXKM 219
N+N KKL I + ++ P+P P+ +++ PP M
Sbjct: 93 NNNNYKKLQYYNINYIEQIPVPVPVPV-----PVYYGNFPPRSM 131
>AY350615-1|AAQ57657.1| 410|Apis mellifera complementary sex
determiner protein.
Length = 410
Score = 22.2 bits (45), Expect = 6.7
Identities = 12/44 (27%), Positives = 21/44 (47%)
Frame = +1
Query: 88 NSNGKKKLVPXXIRFXGRVLGPIPPPLGAKGXXLFFPKXPPXKM 219
N+N KKL I + ++ P+P P+ +++ PP M
Sbjct: 326 NNNNYKKLQYYNINYIEQIPVPVPVPV-----PVYYGNFPPRSM 364
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.315 0.150 0.503
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 170,740
Number of Sequences: 438
Number of extensions: 5305
Number of successful extensions: 50
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 17
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 39
length of database: 146,343
effective HSP length: 58
effective length of database: 120,939
effective search space used: 29267238
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.8 bits)
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