Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP11_FL5_M09
(859 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
X55019-1|CAA38759.1| 517|Homo sapiens acetylcholine receptor de... 33 1.0
BC093925-1|AAH93925.1| 517|Homo sapiens cholinergic receptor, n... 33 1.0
BC093923-1|AAH93923.1| 517|Homo sapiens cholinergic receptor, n... 33 1.0
AC092165-2|AAY24102.1| 517|Homo sapiens unknown protein. 33 1.0
AL445933-4|CAI14538.1| 2406|Homo sapiens human immunodeficiency ... 33 1.3
AL445933-3|CAI14537.1| 2405|Homo sapiens human immunodeficiency ... 33 1.3
AB046775-1|BAB13381.2| 2414|Homo sapiens KIAA1555 protein protein. 33 1.3
BC100831-1|AAI00832.1| 610|Homo sapiens SYTL3 protein protein. 33 1.8
BC100830-1|AAI00831.1| 610|Homo sapiens SYTL3 protein protein. 33 1.8
BC100829-1|AAI00830.1| 610|Homo sapiens SYTL3 protein protein. 33 1.8
BC100828-1|AAI00829.1| 542|Homo sapiens SYTL3 protein protein. 33 1.8
BC085612-1|AAH85612.1| 542|Homo sapiens synaptotagmin-like 3 pr... 33 1.8
AL589931-3|CAI95305.1| 610|Homo sapiens synaptotagmin-like 3 pr... 33 1.8
S77554-1|AAB33983.1| 474|Homo sapiens GABAA receptor beta 2 sub... 32 2.3
S77553-1|AAB33982.1| 512|Homo sapiens GABAA receptor beta 2 sub... 32 2.3
S67368-1|AAB29370.1| 474|Homo sapiens gamma-aminobutyric acid A... 32 2.3
BC111802-1|AAI11803.1| 465|Homo sapiens CHRNG protein protein. 32 2.3
BC105639-1|AAI05640.1| 474|Homo sapiens GABRB2 protein protein. 32 2.3
BC099719-1|AAH99719.1| 474|Homo sapiens GABRB2 protein protein. 32 2.3
BC099705-1|AAH99705.1| 474|Homo sapiens GABRB2 protein protein. 32 2.3
AF278765-1|AAK01082.1| 2406|Homo sapiens kappa B and V(D)J recom... 31 5.4
Y00762-1|CAA68731.1| 457|Homo sapiens protein ( Human mRNA for ... 31 7.1
X02502-1|CAA26344.1| 457|Homo sapiens acetylcholine receptor pr... 31 7.1
X01715-1|CAA25861.1| 520|Homo sapiens acetylcholine receptor ga... 31 7.1
S77094-1|AAD14247.1| 457|Homo sapiens nicotinic acetylcholine r... 31 7.1
BC006314-1|AAH06314.1| 269|Homo sapiens CHRNA1 protein protein. 31 7.1
AC092165-3|AAY24103.1| 520|Homo sapiens unknown protein. 31 7.1
AC018890-1|AAY14687.1| 457|Homo sapiens unknown protein. 31 7.1
Y08416-1|CAA69693.1| 498|Homo sapiens nicotinic acetylcholine r... 30 9.4
U62439-1|AAB40117.1| 498|Homo sapiens nicotinic acetylcholine r... 30 9.4
U48861-1|AAA92123.1| 498|Homo sapiens beta 4 nicotinic acetylch... 30 9.4
BC096083-1|AAH96083.1| 198|Homo sapiens CHRNB4 protein protein. 30 9.4
BC096082-1|AAH96082.1| 498|Homo sapiens cholinergic receptor, n... 30 9.4
BC096081-1|AAH96081.1| 198|Homo sapiens CHRNB4 protein protein. 30 9.4
BC096080-1|AAH96080.1| 498|Homo sapiens cholinergic receptor, n... 30 9.4
AK131092-1|BAC85142.1| 452|Homo sapiens FLJ00307 protein protein. 30 9.4
AJ306454-1|CAC34819.1| 497|Homo sapiens neuronal nicotinic acet... 30 9.4
AF306329-1|AAL02062.1| 498|Homo sapiens neuronal nicotinic acet... 30 9.4
>X55019-1|CAA38759.1| 517|Homo sapiens acetylcholine receptor delta
subunit protein.
Length = 517
Score = 33.5 bits (73), Expect = 1.0
Identities = 16/48 (33%), Positives = 26/48 (54%), Gaps = 1/48 (2%)
Frame = +3
Query: 186 DSKIVVNLTLHLRHA-NIRESESTVRIQADLQMNWIDKRLSWNAGEWG 326
+ + V L L L + +++E E T+ ++ W D RL WNA E+G
Sbjct: 49 EESVDVALALTLSNLISLKEVEETLTTNVWIEHGWTDNRLKWNAEEFG 96
>BC093925-1|AAH93925.1| 517|Homo sapiens cholinergic receptor,
nicotinic, delta protein.
Length = 517
Score = 33.5 bits (73), Expect = 1.0
Identities = 16/48 (33%), Positives = 26/48 (54%), Gaps = 1/48 (2%)
Frame = +3
Query: 186 DSKIVVNLTLHLRHA-NIRESESTVRIQADLQMNWIDKRLSWNAGEWG 326
+ + V L L L + +++E E T+ ++ W D RL WNA E+G
Sbjct: 49 EESVDVALALTLSNLISLKEVEETLTTNVWIEHGWTDNRLKWNAEEFG 96
>BC093923-1|AAH93923.1| 517|Homo sapiens cholinergic receptor,
nicotinic, delta protein.
Length = 517
Score = 33.5 bits (73), Expect = 1.0
Identities = 16/48 (33%), Positives = 26/48 (54%), Gaps = 1/48 (2%)
Frame = +3
Query: 186 DSKIVVNLTLHLRHA-NIRESESTVRIQADLQMNWIDKRLSWNAGEWG 326
+ + V L L L + +++E E T+ ++ W D RL WNA E+G
Sbjct: 49 EESVDVALALTLSNLISLKEVEETLTTNVWIEHGWTDNRLKWNAEEFG 96
>AC092165-2|AAY24102.1| 517|Homo sapiens unknown protein.
Length = 517
Score = 33.5 bits (73), Expect = 1.0
Identities = 16/48 (33%), Positives = 26/48 (54%), Gaps = 1/48 (2%)
Frame = +3
Query: 186 DSKIVVNLTLHLRHA-NIRESESTVRIQADLQMNWIDKRLSWNAGEWG 326
+ + V L L L + +++E E T+ ++ W D RL WNA E+G
Sbjct: 49 EESVDVALALTLSNLISLKEVEETLTTNVWIEHGWTDNRLKWNAEEFG 96
>AL445933-4|CAI14538.1| 2406|Homo sapiens human immunodeficiency virus
type I enhancer binding protein 3 protein.
Length = 2406
Score = 33.1 bits (72), Expect = 1.3
Identities = 35/120 (29%), Positives = 51/120 (42%), Gaps = 2/120 (1%)
Frame = -1
Query: 451 PEPVIRYTXAESVVPGRWLQPRLAVPRQASTSVPRTPAQVLQPHSPAFQLSRLSIQFI*R 272
P P A S+ P QP + VP T P P +P P Q+ R
Sbjct: 831 PPPAPHGRSAHSLQPKLVRQPNIQVPEILVTEEPDRPDTEPEP-PPKEPEKTEEFQWPQR 889
Query: 271 SACIRTVDSDSRMLACLKCRVRLTTILESGGES--RSYVARSESIMRDSDVAFSHSAALA 98
S + + ++ L K R+RL + +S GES S V S S ++S+V+ S S+ A
Sbjct: 890 SQTLAQLPAEK--LPPKKKRLRLAEMAQSSGESSFESSVPLSRSPSQESNVSLSGSSRSA 947
>AL445933-3|CAI14537.1| 2405|Homo sapiens human immunodeficiency virus
type I enhancer binding protein 3 protein.
Length = 2405
Score = 33.1 bits (72), Expect = 1.3
Identities = 35/120 (29%), Positives = 51/120 (42%), Gaps = 2/120 (1%)
Frame = -1
Query: 451 PEPVIRYTXAESVVPGRWLQPRLAVPRQASTSVPRTPAQVLQPHSPAFQLSRLSIQFI*R 272
P P A S+ P QP + VP T P P +P P Q+ R
Sbjct: 831 PPPAPHGRSAHSLQPKLVRQPNIQVPEILVTEEPDRPDTEPEP-PPKEPEKTEEFQWPQR 889
Query: 271 SACIRTVDSDSRMLACLKCRVRLTTILESGGES--RSYVARSESIMRDSDVAFSHSAALA 98
S + + ++ L K R+RL + +S GES S V S S ++S+V+ S S+ A
Sbjct: 890 SQTLAQLPAEK--LPPKKKRLRLAEMAQSSGESSFESSVPLSRSPSQESNVSLSGSSRSA 947
>AB046775-1|BAB13381.2| 2414|Homo sapiens KIAA1555 protein protein.
Length = 2414
Score = 33.1 bits (72), Expect = 1.3
Identities = 35/120 (29%), Positives = 51/120 (42%), Gaps = 2/120 (1%)
Frame = -1
Query: 451 PEPVIRYTXAESVVPGRWLQPRLAVPRQASTSVPRTPAQVLQPHSPAFQLSRLSIQFI*R 272
P P A S+ P QP + VP T P P +P P Q+ R
Sbjct: 840 PPPAPHGRSAHSLQPKLVRQPNIQVPEILVTEEPDRPDTEPEP-PPKEPEKTEEFQWPQR 898
Query: 271 SACIRTVDSDSRMLACLKCRVRLTTILESGGES--RSYVARSESIMRDSDVAFSHSAALA 98
S + + ++ L K R+RL + +S GES S V S S ++S+V+ S S+ A
Sbjct: 899 SQTLAQLPAEK--LPPKKKRLRLAEMAQSSGESSFESSVPLSRSPSQESNVSLSGSSRSA 956
>BC100831-1|AAI00832.1| 610|Homo sapiens SYTL3 protein protein.
Length = 610
Score = 32.7 bits (71), Expect = 1.8
Identities = 21/57 (36%), Positives = 28/57 (49%), Gaps = 2/57 (3%)
Frame = +3
Query: 240 ESESTVRIQADLQ-MNWID-KRLSWNAGEWGCSTWAGVLGTLVEA*RGTAKRGCNHR 404
E E T +++ LQ + W K W E C+ VLG L+ RG RGC+HR
Sbjct: 32 EEERTRKLKTHLQHLRWKGAKNTDWEHKEKCCARCQQVLGFLLH--RGAVCRGCSHR 86
>BC100830-1|AAI00831.1| 610|Homo sapiens SYTL3 protein protein.
Length = 610
Score = 32.7 bits (71), Expect = 1.8
Identities = 21/57 (36%), Positives = 28/57 (49%), Gaps = 2/57 (3%)
Frame = +3
Query: 240 ESESTVRIQADLQ-MNWID-KRLSWNAGEWGCSTWAGVLGTLVEA*RGTAKRGCNHR 404
E E T +++ LQ + W K W E C+ VLG L+ RG RGC+HR
Sbjct: 32 EEERTRKLKTHLQHLRWKGAKNTDWEHKEKCCARCQQVLGFLLH--RGAVCRGCSHR 86
>BC100829-1|AAI00830.1| 610|Homo sapiens SYTL3 protein protein.
Length = 610
Score = 32.7 bits (71), Expect = 1.8
Identities = 21/57 (36%), Positives = 28/57 (49%), Gaps = 2/57 (3%)
Frame = +3
Query: 240 ESESTVRIQADLQ-MNWID-KRLSWNAGEWGCSTWAGVLGTLVEA*RGTAKRGCNHR 404
E E T +++ LQ + W K W E C+ VLG L+ RG RGC+HR
Sbjct: 32 EEERTRKLKTHLQHLRWKGAKNTDWEHKEKCCARCQQVLGFLLH--RGAVCRGCSHR 86
>BC100828-1|AAI00829.1| 542|Homo sapiens SYTL3 protein protein.
Length = 542
Score = 32.7 bits (71), Expect = 1.8
Identities = 21/57 (36%), Positives = 28/57 (49%), Gaps = 2/57 (3%)
Frame = +3
Query: 240 ESESTVRIQADLQ-MNWID-KRLSWNAGEWGCSTWAGVLGTLVEA*RGTAKRGCNHR 404
E E T +++ LQ + W K W E C+ VLG L+ RG RGC+HR
Sbjct: 32 EEERTRKLKTHLQHLRWKGAKNTDWEHKEKCCARCQQVLGFLLH--RGAVCRGCSHR 86
>BC085612-1|AAH85612.1| 542|Homo sapiens synaptotagmin-like 3
protein.
Length = 542
Score = 32.7 bits (71), Expect = 1.8
Identities = 21/57 (36%), Positives = 28/57 (49%), Gaps = 2/57 (3%)
Frame = +3
Query: 240 ESESTVRIQADLQ-MNWID-KRLSWNAGEWGCSTWAGVLGTLVEA*RGTAKRGCNHR 404
E E T +++ LQ + W K W E C+ VLG L+ RG RGC+HR
Sbjct: 32 EEERTRKLKTHLQHLRWKGAKNTDWEHKEKCCARCQQVLGFLLH--RGAVCRGCSHR 86
>AL589931-3|CAI95305.1| 610|Homo sapiens synaptotagmin-like 3
protein.
Length = 610
Score = 32.7 bits (71), Expect = 1.8
Identities = 21/57 (36%), Positives = 28/57 (49%), Gaps = 2/57 (3%)
Frame = +3
Query: 240 ESESTVRIQADLQ-MNWID-KRLSWNAGEWGCSTWAGVLGTLVEA*RGTAKRGCNHR 404
E E T +++ LQ + W K W E C+ VLG L+ RG RGC+HR
Sbjct: 32 EEERTRKLKTHLQHLRWKGAKNTDWEHKEKCCARCQQVLGFLLH--RGAVCRGCSHR 86
>S77554-1|AAB33983.1| 474|Homo sapiens GABAA receptor beta 2
subunit protein.
Length = 474
Score = 32.3 bits (70), Expect = 2.3
Identities = 24/91 (26%), Positives = 40/91 (43%), Gaps = 7/91 (7%)
Frame = +3
Query: 60 YYSXYRFLLTCAIASAAECENATSLSLM---IDSLLATYDRDSPPD---SKIVVNLTLHL 221
Y+ + F L A A + +++SL+ +D LL YD PD + V + + +
Sbjct: 9 YFGIWSFPLIIAAVCAQSVNDPSNMSLVKETVDRLLKGYDIRLRPDFGGPPVAVGMNIDI 68
Query: 222 RHAN-IRESESTVRIQADLQMNWIDKRLSWN 311
+ + E + Q W DKRLS+N
Sbjct: 69 ASIDMVSEVNMDYTLTMYFQQAWRDKRLSYN 99
>S77553-1|AAB33982.1| 512|Homo sapiens GABAA receptor beta 2
subunit protein.
Length = 512
Score = 32.3 bits (70), Expect = 2.3
Identities = 24/91 (26%), Positives = 40/91 (43%), Gaps = 7/91 (7%)
Frame = +3
Query: 60 YYSXYRFLLTCAIASAAECENATSLSLM---IDSLLATYDRDSPPD---SKIVVNLTLHL 221
Y+ + F L A A + +++SL+ +D LL YD PD + V + + +
Sbjct: 9 YFGIWSFPLIIAAVCAQSVNDPSNMSLVKETVDRLLKGYDIRLRPDFGGPPVAVGMNIDI 68
Query: 222 RHAN-IRESESTVRIQADLQMNWIDKRLSWN 311
+ + E + Q W DKRLS+N
Sbjct: 69 ASIDMVSEVNMDYTLTMYFQQAWRDKRLSYN 99
>S67368-1|AAB29370.1| 474|Homo sapiens gamma-aminobutyric acid A
receptor beta 2 subunit protein.
Length = 474
Score = 32.3 bits (70), Expect = 2.3
Identities = 24/91 (26%), Positives = 40/91 (43%), Gaps = 7/91 (7%)
Frame = +3
Query: 60 YYSXYRFLLTCAIASAAECENATSLSLM---IDSLLATYDRDSPPD---SKIVVNLTLHL 221
Y+ + F L A A + +++SL+ +D LL YD PD + V + + +
Sbjct: 9 YFGIWSFPLIIAAVCAQSVNDPSNMSLVKETVDRLLKGYDIRLRPDFGGPPVAVGMNIDI 68
Query: 222 RHAN-IRESESTVRIQADLQMNWIDKRLSWN 311
+ + E + Q W DKRLS+N
Sbjct: 69 ASIDMVSEVNMDYTLTMYFQQAWRDKRLSYN 99
>BC111802-1|AAI11803.1| 465|Homo sapiens CHRNG protein protein.
Length = 465
Score = 32.3 bits (70), Expect = 2.3
Identities = 25/86 (29%), Positives = 40/86 (46%), Gaps = 5/86 (5%)
Frame = +3
Query: 81 LLTCAIASAAECENATSLSLMIDSLLATYDRDSPPDSKI--VVNLTLHLRHANI---RES 245
LL A+ A+ N L+ D L+ YD + P + VVN++L L N+ E
Sbjct: 11 LLLLAVCLGAQGRNQEE-RLLAD-LMQNYDPNLRPAERDSDVVNVSLKLTLTNLISLNER 68
Query: 246 ESTVRIQADLQMNWIDKRLSWNAGEW 323
E + ++M W D RL W+ ++
Sbjct: 69 EEALTTNVWIEMQWCDYRLRWDPRDY 94
>BC105639-1|AAI05640.1| 474|Homo sapiens GABRB2 protein protein.
Length = 474
Score = 32.3 bits (70), Expect = 2.3
Identities = 24/91 (26%), Positives = 40/91 (43%), Gaps = 7/91 (7%)
Frame = +3
Query: 60 YYSXYRFLLTCAIASAAECENATSLSLM---IDSLLATYDRDSPPD---SKIVVNLTLHL 221
Y+ + F L A A + +++SL+ +D LL YD PD + V + + +
Sbjct: 9 YFGIWSFPLIIAAVCAQSVNDPSNMSLVKETVDRLLKGYDIRLRPDFGGPPVAVGMNIDI 68
Query: 222 RHAN-IRESESTVRIQADLQMNWIDKRLSWN 311
+ + E + Q W DKRLS+N
Sbjct: 69 ASIDMVSEVNMDYTLTMYFQQAWRDKRLSYN 99
>BC099719-1|AAH99719.1| 474|Homo sapiens GABRB2 protein protein.
Length = 474
Score = 32.3 bits (70), Expect = 2.3
Identities = 24/91 (26%), Positives = 40/91 (43%), Gaps = 7/91 (7%)
Frame = +3
Query: 60 YYSXYRFLLTCAIASAAECENATSLSLM---IDSLLATYDRDSPPD---SKIVVNLTLHL 221
Y+ + F L A A + +++SL+ +D LL YD PD + V + + +
Sbjct: 9 YFGIWSFPLIIAAVCAQSVNDPSNMSLVKETVDRLLKGYDIRLRPDFGGPPVAVGMNIDI 68
Query: 222 RHAN-IRESESTVRIQADLQMNWIDKRLSWN 311
+ + E + Q W DKRLS+N
Sbjct: 69 ASIDMVSEVNMDYTLTMYFQQAWRDKRLSYN 99
>BC099705-1|AAH99705.1| 474|Homo sapiens GABRB2 protein protein.
Length = 474
Score = 32.3 bits (70), Expect = 2.3
Identities = 24/91 (26%), Positives = 40/91 (43%), Gaps = 7/91 (7%)
Frame = +3
Query: 60 YYSXYRFLLTCAIASAAECENATSLSLM---IDSLLATYDRDSPPD---SKIVVNLTLHL 221
Y+ + F L A A + +++SL+ +D LL YD PD + V + + +
Sbjct: 9 YFGIWSFPLIIAAVCAQSVNDPSNMSLVKETVDRLLKGYDIRLRPDFGGPPVAVGMNIDI 68
Query: 222 RHAN-IRESESTVRIQADLQMNWIDKRLSWN 311
+ + E + Q W DKRLS+N
Sbjct: 69 ASIDMVSEVNMDYTLTMYFQQAWRDKRLSYN 99
>AF278765-1|AAK01082.1| 2406|Homo sapiens kappa B and V(D)J
recombination signal sequences binding protein protein.
Length = 2406
Score = 31.1 bits (67), Expect = 5.4
Identities = 34/120 (28%), Positives = 50/120 (41%), Gaps = 2/120 (1%)
Frame = -1
Query: 451 PEPVIRYTXAESVVPGRWLQPRLAVPRQASTSVPRTPAQVLQPHSPAFQLSRLSIQFI*R 272
P P A S+ P QP + VP T P P +P P Q+ R
Sbjct: 831 PPPAPHGRSAHSLQPKLVRQPNIQVPEILVTEEPDRPDTEPEP-PPKEPEKTEEFQWPQR 889
Query: 271 SACIRTVDSDSRMLACLKCRVRLTTILESGGES--RSYVARSESIMRDSDVAFSHSAALA 98
S + + ++ K R+RL + +S GES S V S S ++S+V+ S S+ A
Sbjct: 890 SQTLAQLPAEK--APPKKKRLRLAEMAQSSGESSFESSVPLSRSPSQESNVSLSGSSRSA 947
>Y00762-1|CAA68731.1| 457|Homo sapiens protein ( Human mRNA for
muscle acetylcholine receptor alpha-subunit. ).
Length = 457
Score = 30.7 bits (66), Expect = 7.1
Identities = 22/87 (25%), Positives = 37/87 (42%), Gaps = 5/87 (5%)
Frame = +3
Query: 81 LLTCAIASAAECENATSLSLMIDSLLATYDRDSPP--DSKIVVNLTLHLRHA---NIRES 245
LL ++ SA + + ++ L Y P D + VV +T+ L+ N+ E
Sbjct: 7 LLLFSLCSAGLVLGSEHETRLVAKLFKDYSSVVRPVEDHRQVVEVTVGLQLIQLINVDEV 66
Query: 246 ESTVRIQADLQMNWIDKRLSWNAGEWG 326
V L+ W+D L WN ++G
Sbjct: 67 NQIVTTNVRLKQQWVDYNLKWNPDDYG 93
>X02502-1|CAA26344.1| 457|Homo sapiens acetylcholine receptor
protein.
Length = 457
Score = 30.7 bits (66), Expect = 7.1
Identities = 22/87 (25%), Positives = 37/87 (42%), Gaps = 5/87 (5%)
Frame = +3
Query: 81 LLTCAIASAAECENATSLSLMIDSLLATYDRDSPP--DSKIVVNLTLHLRHA---NIRES 245
LL ++ SA + + ++ L Y P D + VV +T+ L+ N+ E
Sbjct: 7 LLLFSLCSAGLVLGSEHETRLVAKLFKDYSSVVRPVEDHRQVVEVTVGLQLIQLINVDEV 66
Query: 246 ESTVRIQADLQMNWIDKRLSWNAGEWG 326
V L+ W+D L WN ++G
Sbjct: 67 NQIVTTNVRLKQQWVDYNLKWNPDDYG 93
>X01715-1|CAA25861.1| 520|Homo sapiens acetylcholine receptor gamma
chain precursor protein.
Length = 520
Score = 30.7 bits (66), Expect = 7.1
Identities = 18/66 (27%), Positives = 32/66 (48%), Gaps = 5/66 (7%)
Frame = +3
Query: 141 MIDSLLATYDRDSPPDSKI--VVNLTLHLRHANI---RESESTVRIQADLQMNWIDKRLS 305
++ L+ YD + P + VVN++L L N+ E E + ++M W D RL
Sbjct: 32 LLADLMQNYDPNLRPAERDSDVVNVSLKLTLTNLISLNEREEALTTNVWIEMQWCDYRLR 91
Query: 306 WNAGEW 323
W+ ++
Sbjct: 92 WDPRDY 97
>S77094-1|AAD14247.1| 457|Homo sapiens nicotinic acetylcholine
receptor alpha subunit|AChR protein.
Length = 457
Score = 30.7 bits (66), Expect = 7.1
Identities = 22/87 (25%), Positives = 37/87 (42%), Gaps = 5/87 (5%)
Frame = +3
Query: 81 LLTCAIASAAECENATSLSLMIDSLLATYDRDSPP--DSKIVVNLTLHLRHA---NIRES 245
LL ++ SA + + ++ L Y P D + VV +T+ L+ N+ E
Sbjct: 7 LLLFSLCSAGLVLGSEHETRLVAKLFKDYSSVVRPVEDHRQVVEVTVGLQLIQLINVDEV 66
Query: 246 ESTVRIQADLQMNWIDKRLSWNAGEWG 326
V L+ W+D L WN ++G
Sbjct: 67 NQIVTTNVRLKQQWVDYNLKWNPDDYG 93
>BC006314-1|AAH06314.1| 269|Homo sapiens CHRNA1 protein protein.
Length = 269
Score = 30.7 bits (66), Expect = 7.1
Identities = 22/87 (25%), Positives = 37/87 (42%), Gaps = 5/87 (5%)
Frame = +3
Query: 81 LLTCAIASAAECENATSLSLMIDSLLATYDRDSPP--DSKIVVNLTLHLRHA---NIRES 245
LL ++ SA + + ++ L Y P D + VV +T+ L+ N+ E
Sbjct: 7 LLLFSLCSAGLVLGSEHETRLVAKLFKDYSSVVRPVEDHRQVVEVTVGLQLIQLINVDEV 66
Query: 246 ESTVRIQADLQMNWIDKRLSWNAGEWG 326
V L+ W+D L WN ++G
Sbjct: 67 NQIVTTNVRLKQQWVDYNLKWNPDDYG 93
>AC092165-3|AAY24103.1| 520|Homo sapiens unknown protein.
Length = 520
Score = 30.7 bits (66), Expect = 7.1
Identities = 18/66 (27%), Positives = 32/66 (48%), Gaps = 5/66 (7%)
Frame = +3
Query: 141 MIDSLLATYDRDSPPDSKI--VVNLTLHLRHANI---RESESTVRIQADLQMNWIDKRLS 305
++ L+ YD + P + VVN++L L N+ E E + ++M W D RL
Sbjct: 32 LLADLMQNYDPNLRPAERDSDVVNVSLKLTLTNLISLNEREEALTTNVWIEMQWCDYRLR 91
Query: 306 WNAGEW 323
W+ ++
Sbjct: 92 WDPRDY 97
>AC018890-1|AAY14687.1| 457|Homo sapiens unknown protein.
Length = 457
Score = 30.7 bits (66), Expect = 7.1
Identities = 22/87 (25%), Positives = 37/87 (42%), Gaps = 5/87 (5%)
Frame = +3
Query: 81 LLTCAIASAAECENATSLSLMIDSLLATYDRDSPP--DSKIVVNLTLHLRHA---NIRES 245
LL ++ SA + + ++ L Y P D + VV +T+ L+ N+ E
Sbjct: 7 LLLFSLCSAGLVLGSEHETRLVAKLFKDYSSVVRPVEDHRQVVEVTVGLQLIQLINVDEV 66
Query: 246 ESTVRIQADLQMNWIDKRLSWNAGEWG 326
V L+ W+D L WN ++G
Sbjct: 67 NQIVTTNVRLKQQWVDYNLKWNPDDYG 93
>Y08416-1|CAA69693.1| 498|Homo sapiens nicotinic acetylcholine
receptor beta4 subunit precursor protein.
Length = 498
Score = 30.3 bits (65), Expect = 9.4
Identities = 21/84 (25%), Positives = 38/84 (45%), Gaps = 7/84 (8%)
Frame = +3
Query: 93 AIASAAECENATSLSLMIDSLL--ATYD---RDSPPDSKIV-VNLTLHLRHA-NIRESES 251
A+ C A + ++D LL Y+ R + S+++ + L L L ++ E E
Sbjct: 14 ALCGRGNCRVANAEEKLMDDLLNKTRYNNLIRPATSSSQLISIKLQLSLAQLISVNEREQ 73
Query: 252 TVRIQADLQMNWIDKRLSWNAGEW 323
+ L+ W D RL+WN+ +
Sbjct: 74 IMTTNVWLKQEWTDYRLTWNSSRY 97
>U62439-1|AAB40117.1| 498|Homo sapiens nicotinic acetylcholine
receptor beta4 subunit precursor protein.
Length = 498
Score = 30.3 bits (65), Expect = 9.4
Identities = 21/84 (25%), Positives = 38/84 (45%), Gaps = 7/84 (8%)
Frame = +3
Query: 93 AIASAAECENATSLSLMIDSLL--ATYD---RDSPPDSKIV-VNLTLHLRHA-NIRESES 251
A+ C A + ++D LL Y+ R + S+++ + L L L ++ E E
Sbjct: 14 ALCGRGNCRVANAEEKLMDDLLNKTRYNNLIRPATSSSQLISIKLQLSLAQLISVNEREQ 73
Query: 252 TVRIQADLQMNWIDKRLSWNAGEW 323
+ L+ W D RL+WN+ +
Sbjct: 74 IMTTNVWLKQEWTDYRLTWNSSRY 97
>U48861-1|AAA92123.1| 498|Homo sapiens beta 4 nicotinic
acetylcholine receptor subunit protein.
Length = 498
Score = 30.3 bits (65), Expect = 9.4
Identities = 21/84 (25%), Positives = 38/84 (45%), Gaps = 7/84 (8%)
Frame = +3
Query: 93 AIASAAECENATSLSLMIDSLL--ATYD---RDSPPDSKIV-VNLTLHLRHA-NIRESES 251
A+ C A + ++D LL Y+ R + S+++ + L L L ++ E E
Sbjct: 14 ALCGRGNCRVANAEEKLMDDLLNKTRYNNLIRPATSSSQLISIKLQLSLAQLISVNEREQ 73
Query: 252 TVRIQADLQMNWIDKRLSWNAGEW 323
+ L+ W D RL+WN+ +
Sbjct: 74 IMTTNVWLKQEWTDYRLTWNSSRY 97
>BC096083-1|AAH96083.1| 198|Homo sapiens CHRNB4 protein protein.
Length = 198
Score = 30.3 bits (65), Expect = 9.4
Identities = 21/84 (25%), Positives = 38/84 (45%), Gaps = 7/84 (8%)
Frame = +3
Query: 93 AIASAAECENATSLSLMIDSLL--ATYD---RDSPPDSKIV-VNLTLHLRHA-NIRESES 251
A+ C A + ++D LL Y+ R + S+++ + L L L ++ E E
Sbjct: 14 ALCGRGNCRVANAEEKLMDDLLNKTRYNNLIRPATSSSQLISIKLQLSLAQLISVNEREQ 73
Query: 252 TVRIQADLQMNWIDKRLSWNAGEW 323
+ L+ W D RL+WN+ +
Sbjct: 74 IMTTNVWLKQEWTDYRLTWNSSRY 97
>BC096082-1|AAH96082.1| 498|Homo sapiens cholinergic receptor,
nicotinic, beta 4 protein.
Length = 498
Score = 30.3 bits (65), Expect = 9.4
Identities = 21/84 (25%), Positives = 38/84 (45%), Gaps = 7/84 (8%)
Frame = +3
Query: 93 AIASAAECENATSLSLMIDSLL--ATYD---RDSPPDSKIV-VNLTLHLRHA-NIRESES 251
A+ C A + ++D LL Y+ R + S+++ + L L L ++ E E
Sbjct: 14 ALCGRGNCRVANAEEKLMDDLLNKTRYNNLIRPATSSSQLISIKLQLSLAQLISVNEREQ 73
Query: 252 TVRIQADLQMNWIDKRLSWNAGEW 323
+ L+ W D RL+WN+ +
Sbjct: 74 IMTTNVWLKQEWTDYRLTWNSSRY 97
>BC096081-1|AAH96081.1| 198|Homo sapiens CHRNB4 protein protein.
Length = 198
Score = 30.3 bits (65), Expect = 9.4
Identities = 21/84 (25%), Positives = 38/84 (45%), Gaps = 7/84 (8%)
Frame = +3
Query: 93 AIASAAECENATSLSLMIDSLL--ATYD---RDSPPDSKIV-VNLTLHLRHA-NIRESES 251
A+ C A + ++D LL Y+ R + S+++ + L L L ++ E E
Sbjct: 14 ALCGRGNCRVANAEEKLMDDLLNKTRYNNLIRPATSSSQLISIKLQLSLAQLISVNEREQ 73
Query: 252 TVRIQADLQMNWIDKRLSWNAGEW 323
+ L+ W D RL+WN+ +
Sbjct: 74 IMTTNVWLKQEWTDYRLTWNSSRY 97
>BC096080-1|AAH96080.1| 498|Homo sapiens cholinergic receptor,
nicotinic, beta 4 protein.
Length = 498
Score = 30.3 bits (65), Expect = 9.4
Identities = 21/84 (25%), Positives = 38/84 (45%), Gaps = 7/84 (8%)
Frame = +3
Query: 93 AIASAAECENATSLSLMIDSLL--ATYD---RDSPPDSKIV-VNLTLHLRHA-NIRESES 251
A+ C A + ++D LL Y+ R + S+++ + L L L ++ E E
Sbjct: 14 ALCGRGNCRVANAEEKLMDDLLNKTRYNNLIRPATSSSQLISIKLQLSLAQLISVNEREQ 73
Query: 252 TVRIQADLQMNWIDKRLSWNAGEW 323
+ L+ W D RL+WN+ +
Sbjct: 74 IMTTNVWLKQEWTDYRLTWNSSRY 97
>AK131092-1|BAC85142.1| 452|Homo sapiens FLJ00307 protein protein.
Length = 452
Score = 30.3 bits (65), Expect = 9.4
Identities = 20/56 (35%), Positives = 27/56 (48%), Gaps = 2/56 (3%)
Frame = +3
Query: 243 SESTVRIQADLQ-MNWID-KRLSWNAGEWGCSTWAGVLGTLVEA*RGTAKRGCNHR 404
SE +++ LQ + W K W E C+ VLG L+ RG RGC+HR
Sbjct: 47 SEGCRKLKTHLQHLRWKGAKNTDWEHKEKCCARCQQVLGFLLH--RGAVCRGCSHR 100
>AJ306454-1|CAC34819.1| 497|Homo sapiens neuronal nicotinic
acetylcholine receptor beta-4 subunit protein.
Length = 497
Score = 30.3 bits (65), Expect = 9.4
Identities = 21/84 (25%), Positives = 38/84 (45%), Gaps = 7/84 (8%)
Frame = +3
Query: 93 AIASAAECENATSLSLMIDSLL--ATYD---RDSPPDSKIV-VNLTLHLRHA-NIRESES 251
A+ C A + ++D LL Y+ R + S+++ + L L L ++ E E
Sbjct: 14 ALCGRGNCRVANAEEKLMDDLLNKTRYNNLIRPATSSSQLISIKLQLSLAQLISVNEREQ 73
Query: 252 TVRIQADLQMNWIDKRLSWNAGEW 323
+ L+ W D RL+WN+ +
Sbjct: 74 IMTTNVWLKQEWTDYRLTWNSSRY 97
>AF306329-1|AAL02062.1| 498|Homo sapiens neuronal nicotinic
acetylcholine receptor beta 4 subunit protein.
Length = 498
Score = 30.3 bits (65), Expect = 9.4
Identities = 21/84 (25%), Positives = 38/84 (45%), Gaps = 7/84 (8%)
Frame = +3
Query: 93 AIASAAECENATSLSLMIDSLL--ATYD---RDSPPDSKIV-VNLTLHLRHA-NIRESES 251
A+ C A + ++D LL Y+ R + S+++ + L L L ++ E E
Sbjct: 14 ALCGRGNCRVANAEEKLMDDLLNKTRYNNLIRPATSSSQLISIKLQLSLAQLISVNEREQ 73
Query: 252 TVRIQADLQMNWIDKRLSWNAGEW 323
+ L+ W D RL+WN+ +
Sbjct: 74 IMTTNVWLKQEWTDYRLTWNSSRY 97
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 100,116,345
Number of Sequences: 237096
Number of extensions: 2074514
Number of successful extensions: 6036
Number of sequences better than 10.0: 38
Number of HSP's better than 10.0 without gapping: 5273
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6005
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 10928473528
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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