Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP11_FL5_M09
(859 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U42839-9|AAC69013.3| 355|Caenorhabditis elegans Ligand-gated io... 39 0.005
AL110479-15|CAB54361.2| 400|Caenorhabditis elegans Hypothetical... 38 0.007
Z81512-8|CAH19099.1| 509|Caenorhabditis elegans Hypothetical pr... 37 0.016
Z81512-7|CAD54133.1| 504|Caenorhabditis elegans Hypothetical pr... 37 0.016
AL033515-2|CAH19093.1| 509|Caenorhabditis elegans Hypothetical ... 37 0.016
AL033515-1|CAD54179.1| 504|Caenorhabditis elegans Hypothetical ... 37 0.016
AL033511-2|CAH19091.1| 509|Caenorhabditis elegans Hypothetical ... 37 0.016
AL033511-1|CAA22072.2| 504|Caenorhabditis elegans Hypothetical ... 37 0.016
Z78417-4|CAB01685.2| 531|Caenorhabditis elegans Hypothetical pr... 37 0.021
Z67737-1|CAA91536.2| 399|Caenorhabditis elegans Hypothetical pr... 37 0.021
X98600-1|CAA67197.1| 511|Caenorhabditis elegans alpha nicotinic... 36 0.049
X98599-1|CAA67196.1| 511|Caenorhabditis elegans alpha nicotinic... 36 0.049
U88175-2|AAB42282.2| 511|Caenorhabditis elegans Uncoordinated p... 36 0.049
AF038614-9|AAB92062.2| 445|Caenorhabditis elegans Hypothetical ... 35 0.065
L23649-2|AAA27911.2| 433|Caenorhabditis elegans Coelomocyte upt... 34 0.11
AY611497-1|AAT42012.1| 433|Caenorhabditis elegans CUP-4 protein. 34 0.11
AC084197-41|AAG23462.3| 493|Caenorhabditis elegans Ligand-gated... 34 0.15
Z99281-1|CAB16504.2| 439|Caenorhabditis elegans Hypothetical pr... 33 0.20
Z78540-1|CAB01736.1| 409|Caenorhabditis elegans Hypothetical pr... 33 0.20
X83887-1|CAA58764.1| 498|Caenorhabditis elegans alpha-1 subunit... 33 0.20
AY523511-1|AAR98633.1| 498|Caenorhabditis elegans acetylcholine... 33 0.20
AF022973-7|AAN84815.1| 480|Caenorhabditis elegans Acetylcholine... 33 0.20
AF022973-6|AAC25796.1| 498|Caenorhabditis elegans Acetylcholine... 33 0.20
AF022973-5|AAC25797.4| 479|Caenorhabditis elegans Acetylcholine... 33 0.20
AC006834-2|AAF40009.1| 562|Caenorhabditis elegans Acetylcholine... 33 0.26
AC024783-1|AAY86294.1| 404|Caenorhabditis elegans Hypothetical ... 33 0.34
Z67737-5|CAA91541.2| 401|Caenorhabditis elegans Hypothetical pr... 32 0.45
Z50029-2|CAA90341.3| 537|Caenorhabditis elegans Hypothetical pr... 32 0.45
AF016445-13|AAC69055.3| 371|Caenorhabditis elegans Ligand-gated... 32 0.45
Z67737-2|CAA91537.3| 400|Caenorhabditis elegans Hypothetical pr... 31 1.1
U39855-1|AAA81080.3| 615|Caenorhabditis elegans Hypothetical pr... 31 1.4
AF000298-11|AAM97960.1| 518|Caenorhabditis elegans Prion-like-(... 31 1.4
AF000298-10|AAM97961.1| 539|Caenorhabditis elegans Prion-like-(... 31 1.4
AF000298-8|AAC48255.2| 524|Caenorhabditis elegans Prion-like-(q... 31 1.4
Z70266-4|CAA94206.3| 534|Caenorhabditis elegans Hypothetical pr... 30 2.4
U88167-6|AAB42223.1| 461|Caenorhabditis elegans Acetylcholine r... 30 2.4
AC024207-2|AAL77193.1| 425|Caenorhabditis elegans Hypothetical ... 30 2.4
AC024207-1|AAL77194.1| 428|Caenorhabditis elegans Hypothetical ... 30 2.4
Z67737-4|CAA91539.2| 401|Caenorhabditis elegans Hypothetical pr... 29 3.2
AF288374-1|AAK83056.1| 502|Caenorhabditis elegans nicotinic ace... 29 3.2
AC006708-21|AAF60421.3| 502|Caenorhabditis elegans Uncoordinate... 29 3.2
Z92837-3|CAB07402.3| 502|Caenorhabditis elegans Hypothetical pr... 29 4.2
X86403-1|CAA60157.1| 575|Caenorhabditis elegans nicotinic acety... 29 4.2
U23525-1|AAK71377.1| 575|Caenorhabditis elegans Acetylcholine r... 29 4.2
U10401-10|AAA19062.2| 476|Caenorhabditis elegans Hypothetical p... 29 4.2
AF047656-7|AAC05108.2| 462|Caenorhabditis elegans Ligand-gated ... 29 4.2
AF016664-8|AAY44018.1| 397|Caenorhabditis elegans Hypothetical ... 29 4.2
Z99281-29|CAH04731.2| 438|Caenorhabditis elegans Hypothetical p... 29 5.6
Z74044-1|CAA98550.1| 548|Caenorhabditis elegans Hypothetical pr... 29 5.6
Z74039-11|CAA98508.1| 548|Caenorhabditis elegans Hypothetical p... 29 5.6
AF077307-1|AAC98095.1| 548|Caenorhabditis elegans acetyl cholin... 29 5.6
Z67737-3|CAA91538.2| 399|Caenorhabditis elegans Hypothetical pr... 28 7.4
U50310-5|AAA92541.1| 318|Caenorhabditis elegans Ground-like (gr... 28 7.4
AF106582-1|AAC78217.3| 1424|Caenorhabditis elegans Hypothetical ... 28 7.4
AF016674-6|AAB66129.1| 530|Caenorhabditis elegans Hypothetical ... 28 7.4
AC084197-42|AAU87806.2| 544|Caenorhabditis elegans Acetylcholin... 28 7.4
Z83104-2|CAB54203.1| 563|Caenorhabditis elegans Hypothetical pr... 28 9.8
Z83104-1|CAB54204.1| 573|Caenorhabditis elegans Hypothetical pr... 28 9.8
Z81102-3|CAB03201.2| 189|Caenorhabditis elegans Hypothetical pr... 28 9.8
Z70205-8|CAO78730.1| 270|Caenorhabditis elegans Hypothetical pr... 28 9.8
Z70205-7|CAA94120.2| 996|Caenorhabditis elegans Hypothetical pr... 28 9.8
Z67735-2|CAA91530.2| 403|Caenorhabditis elegans Hypothetical pr... 28 9.8
U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis def... 28 9.8
U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis def... 28 9.8
AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein. 28 9.8
AB054992-1|BAB62002.1| 996|Caenorhabditis elegans peroxin protein. 28 9.8
>U42839-9|AAC69013.3| 355|Caenorhabditis elegans Ligand-gated ion
channel protein 3 protein.
Length = 355
Score = 38.7 bits (86), Expect = 0.005
Identities = 23/95 (24%), Positives = 43/95 (45%), Gaps = 2/95 (2%)
Frame = +3
Query: 45 NVDDLYYSXYRFLLTCAIASAAECENAT-SLSLMIDSLLATYDRDSPPDSKIVVNLTLHL 221
N+ + + + F+ T + A E S S + LL +++ SPPD ++ ++ + L
Sbjct: 40 NMQCSFLTIFIFITTVTVGVAEFSEQYQGSSSRLTRHLLEKHNKCSPPDGRVDISHNIEL 99
Query: 222 RHA-NIRESESTVRIQADLQMNWIDKRLSWNAGEW 323
H I E +++ + W D LSW E+
Sbjct: 100 VHIIGINELNQNMQVLVYIVQQWTDASLSWKVEEF 134
>AL110479-15|CAB54361.2| 400|Caenorhabditis elegans Hypothetical
protein Y105C5B.16 protein.
Length = 400
Score = 38.3 bits (85), Expect = 0.007
Identities = 16/57 (28%), Positives = 29/57 (50%)
Frame = +3
Query: 165 YDRDSPPDSKIVVNLTLHLRHANIRESESTVRIQADLQMNWIDKRLSWNAGEWGCST 335
YD ++P + L +L+ ++E + + + ++ W D RLSWNA W +T
Sbjct: 64 YDNEAPKRYNYTIFL-YYLKLVEVQEPQEKISVVMEIMEYWYDARLSWNASAWQNTT 119
>Z81512-8|CAH19099.1| 509|Caenorhabditis elegans Hypothetical
protein Y44A6E.1b protein.
Length = 509
Score = 37.1 bits (82), Expect = 0.016
Identities = 19/69 (27%), Positives = 36/69 (52%), Gaps = 3/69 (4%)
Frame = +3
Query: 141 MIDSLLATYDRDSPPDSKIVVNLTLHLRHA-NIRESESTVRIQADLQMNWIDKRLSWNAG 317
+ + LL+ ++ ++PPD + V L L H I E + T+ + + +W+D L+W+
Sbjct: 70 LTEYLLSRHNLNAPPDGLLYVEYELELVHILGIDELKQTMTVLIYVDEHWVDPSLTWDPA 129
Query: 318 EWG--CSTW 338
+G TW
Sbjct: 130 LFGGITKTW 138
>Z81512-7|CAD54133.1| 504|Caenorhabditis elegans Hypothetical
protein Y44A6E.1a protein.
Length = 504
Score = 37.1 bits (82), Expect = 0.016
Identities = 19/69 (27%), Positives = 36/69 (52%), Gaps = 3/69 (4%)
Frame = +3
Query: 141 MIDSLLATYDRDSPPDSKIVVNLTLHLRHA-NIRESESTVRIQADLQMNWIDKRLSWNAG 317
+ + LL+ ++ ++PPD + V L L H I E + T+ + + +W+D L+W+
Sbjct: 70 LTEYLLSRHNLNAPPDGLLYVEYELELVHILGIDELKQTMTVLIYVDEHWVDPSLTWDPA 129
Query: 318 EWG--CSTW 338
+G TW
Sbjct: 130 LFGGITKTW 138
>AL033515-2|CAH19093.1| 509|Caenorhabditis elegans Hypothetical
protein Y44A6E.1b protein.
Length = 509
Score = 37.1 bits (82), Expect = 0.016
Identities = 19/69 (27%), Positives = 36/69 (52%), Gaps = 3/69 (4%)
Frame = +3
Query: 141 MIDSLLATYDRDSPPDSKIVVNLTLHLRHA-NIRESESTVRIQADLQMNWIDKRLSWNAG 317
+ + LL+ ++ ++PPD + V L L H I E + T+ + + +W+D L+W+
Sbjct: 70 LTEYLLSRHNLNAPPDGLLYVEYELELVHILGIDELKQTMTVLIYVDEHWVDPSLTWDPA 129
Query: 318 EWG--CSTW 338
+G TW
Sbjct: 130 LFGGITKTW 138
>AL033515-1|CAD54179.1| 504|Caenorhabditis elegans Hypothetical
protein Y44A6E.1a protein.
Length = 504
Score = 37.1 bits (82), Expect = 0.016
Identities = 19/69 (27%), Positives = 36/69 (52%), Gaps = 3/69 (4%)
Frame = +3
Query: 141 MIDSLLATYDRDSPPDSKIVVNLTLHLRHA-NIRESESTVRIQADLQMNWIDKRLSWNAG 317
+ + LL+ ++ ++PPD + V L L H I E + T+ + + +W+D L+W+
Sbjct: 70 LTEYLLSRHNLNAPPDGLLYVEYELELVHILGIDELKQTMTVLIYVDEHWVDPSLTWDPA 129
Query: 318 EWG--CSTW 338
+G TW
Sbjct: 130 LFGGITKTW 138
>AL033511-2|CAH19091.1| 509|Caenorhabditis elegans Hypothetical
protein Y44A6E.1b protein.
Length = 509
Score = 37.1 bits (82), Expect = 0.016
Identities = 19/69 (27%), Positives = 36/69 (52%), Gaps = 3/69 (4%)
Frame = +3
Query: 141 MIDSLLATYDRDSPPDSKIVVNLTLHLRHA-NIRESESTVRIQADLQMNWIDKRLSWNAG 317
+ + LL+ ++ ++PPD + V L L H I E + T+ + + +W+D L+W+
Sbjct: 70 LTEYLLSRHNLNAPPDGLLYVEYELELVHILGIDELKQTMTVLIYVDEHWVDPSLTWDPA 129
Query: 318 EWG--CSTW 338
+G TW
Sbjct: 130 LFGGITKTW 138
>AL033511-1|CAA22072.2| 504|Caenorhabditis elegans Hypothetical
protein Y44A6E.1a protein.
Length = 504
Score = 37.1 bits (82), Expect = 0.016
Identities = 19/69 (27%), Positives = 36/69 (52%), Gaps = 3/69 (4%)
Frame = +3
Query: 141 MIDSLLATYDRDSPPDSKIVVNLTLHLRHA-NIRESESTVRIQADLQMNWIDKRLSWNAG 317
+ + LL+ ++ ++PPD + V L L H I E + T+ + + +W+D L+W+
Sbjct: 70 LTEYLLSRHNLNAPPDGLLYVEYELELVHILGIDELKQTMTVLIYVDEHWVDPSLTWDPA 129
Query: 318 EWG--CSTW 338
+G TW
Sbjct: 130 LFGGITKTW 138
>Z78417-4|CAB01685.2| 531|Caenorhabditis elegans Hypothetical
protein C35C5.5 protein.
Length = 531
Score = 36.7 bits (81), Expect = 0.021
Identities = 23/88 (26%), Positives = 39/88 (44%), Gaps = 5/88 (5%)
Frame = +3
Query: 78 FLLTCAIASAAECENATSLSLMIDSLLATYDRDSPP----DSKIVVNLTLHL-RHANIRE 242
FLL I +S ++++LL Y++ P + V +L R ++ E
Sbjct: 11 FLLVIFILHIVTINANKHVSQLLENLLTDYNKAVRPVHNASDALKVKFGANLCRLIDVDE 70
Query: 243 SESTVRIQADLQMNWIDKRLSWNAGEWG 326
+ L+M W DK+L+WN +WG
Sbjct: 71 VNQVLTTSLWLEMQWYDKKLTWNPTDWG 98
>Z67737-1|CAA91536.2| 399|Caenorhabditis elegans Hypothetical
protein T01H10.1 protein.
Length = 399
Score = 36.7 bits (81), Expect = 0.021
Identities = 18/53 (33%), Positives = 27/53 (50%)
Frame = +3
Query: 165 YDRDSPPDSKIVVNLTLHLRHANIRESESTVRIQADLQMNWIDKRLSWNAGEW 323
YD D+P + L +L+ + E E V + +L W D RLSWNA ++
Sbjct: 65 YDPDAPQRYNYTLFL-YNLKLIQVNEPEEQVSVVLELMEYWYDPRLSWNASDY 116
>X98600-1|CAA67197.1| 511|Caenorhabditis elegans alpha nicotinic
acetylcholine receptorsubunit protein.
Length = 511
Score = 35.5 bits (78), Expect = 0.049
Identities = 21/90 (23%), Positives = 39/90 (43%), Gaps = 5/90 (5%)
Frame = +3
Query: 72 YRFLLTCAIASAAECENATSLSLMIDSLLATYDR----DSPPDSKIVVNLTLHLRHA-NI 236
+ LL I+ E + D L+ Y+R + P+ + + L L L ++
Sbjct: 7 FLLLLLFCISFIKLTEGNEDAKRLYDDLMVNYNRHRRPSTSPNKPLTIKLKLRLSQIIDV 66
Query: 237 RESESTVRIQADLQMNWIDKRLSWNAGEWG 326
E + + L+ WID++LSW+ +G
Sbjct: 67 HEIDQIMTCSVWLKQTWIDRKLSWDPVNYG 96
>X98599-1|CAA67196.1| 511|Caenorhabditis elegans alpha nicotinic
acetylcholine receptorsubunit protein.
Length = 511
Score = 35.5 bits (78), Expect = 0.049
Identities = 21/90 (23%), Positives = 39/90 (43%), Gaps = 5/90 (5%)
Frame = +3
Query: 72 YRFLLTCAIASAAECENATSLSLMIDSLLATYDR----DSPPDSKIVVNLTLHLRHA-NI 236
+ LL I+ E + D L+ Y+R + P+ + + L L L ++
Sbjct: 7 FLLLLLFCISFIKLTEGNEDAKRLYDDLMVNYNRHRRPSTSPNKPLTIKLKLRLSQIIDV 66
Query: 237 RESESTVRIQADLQMNWIDKRLSWNAGEWG 326
E + + L+ WID++LSW+ +G
Sbjct: 67 HEIDQIMTCSVWLKQTWIDRKLSWDPVNYG 96
>U88175-2|AAB42282.2| 511|Caenorhabditis elegans Uncoordinated
protein 38 protein.
Length = 511
Score = 35.5 bits (78), Expect = 0.049
Identities = 21/90 (23%), Positives = 39/90 (43%), Gaps = 5/90 (5%)
Frame = +3
Query: 72 YRFLLTCAIASAAECENATSLSLMIDSLLATYDR----DSPPDSKIVVNLTLHLRHA-NI 236
+ LL I+ E + D L+ Y+R + P+ + + L L L ++
Sbjct: 7 FLLLLLFCISFIKLTEGNEDAKRLYDDLMVNYNRHRRPSTSPNKPLTIKLKLRLSQIIDV 66
Query: 237 RESESTVRIQADLQMNWIDKRLSWNAGEWG 326
E + + L+ WID++LSW+ +G
Sbjct: 67 HEIDQIMTCSVWLKQTWIDRKLSWDPVNYG 96
>AF038614-9|AAB92062.2| 445|Caenorhabditis elegans Hypothetical
protein F15E6.2 protein.
Length = 445
Score = 35.1 bits (77), Expect = 0.065
Identities = 16/77 (20%), Positives = 33/77 (42%)
Frame = +3
Query: 102 SAAECENATSLSLMIDSLLATYDRDSPPDSKIVVNLTLHLRHANIRESESTVRIQADLQM 281
S C+ + + TY + +K+V ++ + + I E V++ +
Sbjct: 54 SCHSCQGGDRAWKLRTHIQTTYQNATDNKTKVVRVESVRINNVEIDERRQNVKVFGRFVL 113
Query: 282 NWIDKRLSWNAGEWGCS 332
+W D +SW+ +WG S
Sbjct: 114 SWNDTMVSWDKEQWGLS 130
>L23649-2|AAA27911.2| 433|Caenorhabditis elegans Coelomocyte uptake
defective protein4 protein.
Length = 433
Score = 34.3 bits (75), Expect = 0.11
Identities = 13/50 (26%), Positives = 27/50 (54%)
Frame = +3
Query: 198 VVNLTLHLRHANIRESESTVRIQADLQMNWIDKRLSWNAGEWGCSTWAGV 347
+V++ H+ H +I + E T+ + + M W D+ L W+ ++ +A V
Sbjct: 74 IVDVHWHIIHVSINQREQTMTVHGHIYMRWFDEFLVWDPKDFNNIQYARV 123
>AY611497-1|AAT42012.1| 433|Caenorhabditis elegans CUP-4 protein.
Length = 433
Score = 34.3 bits (75), Expect = 0.11
Identities = 13/50 (26%), Positives = 27/50 (54%)
Frame = +3
Query: 198 VVNLTLHLRHANIRESESTVRIQADLQMNWIDKRLSWNAGEWGCSTWAGV 347
+V++ H+ H +I + E T+ + + M W D+ L W+ ++ +A V
Sbjct: 74 IVDVHWHIIHVSINQREQTMTVHGHIYMRWFDEFLVWDPKDFNNIQYARV 123
>AC084197-41|AAG23462.3| 493|Caenorhabditis elegans Ligand-gated
ion channel protein 10 protein.
Length = 493
Score = 33.9 bits (74), Expect = 0.15
Identities = 24/95 (25%), Positives = 45/95 (47%), Gaps = 7/95 (7%)
Frame = +3
Query: 60 YYSXYRFLLTCAIASAAECENATSL----SLMIDSLLATYDRDSPP--DSKIVVNLTLHL 221
+Y+ + +L +IA CEN +L S +++ + YDR P ++VN+T+ L
Sbjct: 44 FYALFSHILFFSIA--LNCENFRTLDNETSAILNDIFVGYDRRVLPFVQGPVLVNMTIVL 101
Query: 222 RHA-NIRESESTVRIQADLQMNWIDKRLSWNAGEW 323
++E++ W D RLSW+ ++
Sbjct: 102 GILIELKENQQLAAYVISHTQRWYDGRLSWDPSKY 136
>Z99281-1|CAB16504.2| 439|Caenorhabditis elegans Hypothetical
protein Y57G11C.2 protein.
Length = 439
Score = 33.5 bits (73), Expect = 0.20
Identities = 20/100 (20%), Positives = 44/100 (44%), Gaps = 5/100 (5%)
Frame = +3
Query: 54 DLYYSXYRFLLTCAIASAAECENATSLSLMIDSLLATYDRDSPPDSK----IVVNLTLHL 221
+ Y + F L + + E + T + D L+ YD P + +++N++++
Sbjct: 2 NFYDFKFVFYLAISWCNLLEVDGITVAEQLKDVLMEGYDSSIRPVNNERDILIINISMNT 61
Query: 222 RHA-NIRESESTVRIQADLQMNWIDKRLSWNAGEWGCSTW 338
+ +E T+ ++ + W D+ L WN ++ TW
Sbjct: 62 MSVLTLDPAEETINFSSEFILQWKDEFLFWNKSDYNI-TW 100
>Z78540-1|CAB01736.1| 409|Caenorhabditis elegans Hypothetical
protein C33G3.3 protein.
Length = 409
Score = 33.5 bits (73), Expect = 0.20
Identities = 19/71 (26%), Positives = 32/71 (45%), Gaps = 2/71 (2%)
Frame = +3
Query: 117 ENATSLS-LMIDSLLATYDRDSPPDSKIVVNLT-LHLRHANIRESESTVRIQADLQMNWI 290
E+A L+ L I +A+ + + +N L+H + E + I L+++W
Sbjct: 33 ESAKKLAKLNIPHAIASIPPNYLSQQPVTINFAQFTLQHFELNEHLKDISIHGYLELSWH 92
Query: 291 DKRLSWNAGEW 323
D RL WN W
Sbjct: 93 DDRLMWNQDTW 103
>X83887-1|CAA58764.1| 498|Caenorhabditis elegans alpha-1 subunit of
nicotinic acetylcholinereceptor protein.
Length = 498
Score = 33.5 bits (73), Expect = 0.20
Identities = 24/87 (27%), Positives = 39/87 (44%), Gaps = 5/87 (5%)
Frame = +3
Query: 81 LLTCAIASAAECENATSLSLMIDSLLATYDRDSPPDSKIVVNLTLHLRHA-----NIRES 245
L++CAI +A + L D L+ Y+ P + +T+HL+ A ++ E
Sbjct: 7 LISCAILAAPTLGSLQERRLYED-LMRNYNNLERPVANHSEPVTVHLKVALQQIIDVDEK 65
Query: 246 ESTVRIQADLQMNWIDKRLSWNAGEWG 326
V + A L W D L W+ E+G
Sbjct: 66 NQVVYVNAWLDYTWNDYNLVWDKAEYG 92
>AY523511-1|AAR98633.1| 498|Caenorhabditis elegans acetylcholine
receptor (57.1 kD)alternative variant 1 protein.
Length = 498
Score = 33.5 bits (73), Expect = 0.20
Identities = 24/87 (27%), Positives = 39/87 (44%), Gaps = 5/87 (5%)
Frame = +3
Query: 81 LLTCAIASAAECENATSLSLMIDSLLATYDRDSPPDSKIVVNLTLHLRHA-----NIRES 245
L++CAI +A + L D L+ Y+ P + +T+HL+ A ++ E
Sbjct: 7 LISCAILAAPTLGSLQERRLYED-LMRNYNNLERPVANHSEPVTVHLKVALQQIIDVDEK 65
Query: 246 ESTVRIQADLQMNWIDKRLSWNAGEWG 326
V + A L W D L W+ E+G
Sbjct: 66 NQVVYVNAWLDYTWNDYNLVWDKAEYG 92
>AF022973-7|AAN84815.1| 480|Caenorhabditis elegans Acetylcholine
receptor protein16, isoform b protein.
Length = 480
Score = 33.5 bits (73), Expect = 0.20
Identities = 24/87 (27%), Positives = 39/87 (44%), Gaps = 5/87 (5%)
Frame = +3
Query: 81 LLTCAIASAAECENATSLSLMIDSLLATYDRDSPPDSKIVVNLTLHLRHA-----NIRES 245
L++CAI +A + L D L+ Y+ P + +T+HL+ A ++ E
Sbjct: 7 LISCAILAAPTLGSLQERRLYED-LMRNYNNLERPVANHSEPVTVHLKVALQQIIDVDEK 65
Query: 246 ESTVRIQADLQMNWIDKRLSWNAGEWG 326
V + A L W D L W+ E+G
Sbjct: 66 NQVVYVNAWLDYTWNDYNLVWDKAEYG 92
>AF022973-6|AAC25796.1| 498|Caenorhabditis elegans Acetylcholine
receptor protein16, isoform a protein.
Length = 498
Score = 33.5 bits (73), Expect = 0.20
Identities = 24/87 (27%), Positives = 39/87 (44%), Gaps = 5/87 (5%)
Frame = +3
Query: 81 LLTCAIASAAECENATSLSLMIDSLLATYDRDSPPDSKIVVNLTLHLRHA-----NIRES 245
L++CAI +A + L D L+ Y+ P + +T+HL+ A ++ E
Sbjct: 7 LISCAILAAPTLGSLQERRLYED-LMRNYNNLERPVANHSEPVTVHLKVALQQIIDVDEK 65
Query: 246 ESTVRIQADLQMNWIDKRLSWNAGEWG 326
V + A L W D L W+ E+G
Sbjct: 66 NQVVYVNAWLDYTWNDYNLVWDKAEYG 92
>AF022973-5|AAC25797.4| 479|Caenorhabditis elegans Acetylcholine
receptor protein 15 protein.
Length = 479
Score = 33.5 bits (73), Expect = 0.20
Identities = 20/61 (32%), Positives = 34/61 (55%), Gaps = 5/61 (8%)
Frame = +3
Query: 141 MIDSLLATYDRDSPP--DSK--IVVNLTLHLRHA-NIRESESTVRIQADLQMNWIDKRLS 305
+I+ L++ Y R+ P DS +VV+L + L+ N+ E E + + A L+ W D+ L
Sbjct: 25 LINDLMSGYVREERPTLDSSKPVVVSLGVFLQQIINLSEKEEQLEVNAWLKFQWRDENLR 84
Query: 306 W 308
W
Sbjct: 85 W 85
>AC006834-2|AAF40009.1| 562|Caenorhabditis elegans Acetylcholine
receptor protein 6 protein.
Length = 562
Score = 33.1 bits (72), Expect = 0.26
Identities = 11/32 (34%), Positives = 20/32 (62%)
Frame = +3
Query: 231 NIRESESTVRIQADLQMNWIDKRLSWNAGEWG 326
++ E + + ++ L +W+D RLSWN E+G
Sbjct: 44 DVHEKDQVITLKGTLIHHWLDYRLSWNPDEFG 75
>AC024783-1|AAY86294.1| 404|Caenorhabditis elegans Hypothetical
protein Y45G5AL.2 protein.
Length = 404
Score = 32.7 bits (71), Expect = 0.34
Identities = 14/49 (28%), Positives = 26/49 (53%)
Frame = +3
Query: 180 PPDSKIVVNLTLHLRHANIRESESTVRIQADLQMNWIDKRLSWNAGEWG 326
PP +I + L++ ++ + E E D + +W D RLSW+ ++G
Sbjct: 79 PPRFEITIQLSM-MKLVEVVEPEEKATFLFDYRADWYDTRLSWDPEDYG 126
>Z67737-5|CAA91541.2| 401|Caenorhabditis elegans Hypothetical
protein T01H10.6 protein.
Length = 401
Score = 32.3 bits (70), Expect = 0.45
Identities = 13/36 (36%), Positives = 20/36 (55%)
Frame = +3
Query: 207 LTLHLRHANIRESESTVRIQADLQMNWIDKRLSWNA 314
L +L+ ++E E V + +L W D RLSWN+
Sbjct: 79 LLYYLKLVEVQEPEEKVSVVLELVEQWYDPRLSWNS 114
>Z50029-2|CAA90341.3| 537|Caenorhabditis elegans Hypothetical
protein ZC504.2 protein.
Length = 537
Score = 32.3 bits (70), Expect = 0.45
Identities = 12/36 (33%), Positives = 18/36 (50%)
Frame = +3
Query: 219 LRHANIRESESTVRIQADLQMNWIDKRLSWNAGEWG 326
+R ++ E + L+M W D RL W+ G WG
Sbjct: 59 IRIIDVDEVNQVLTTNLWLEMQWFDYRLMWDPGRWG 94
>AF016445-13|AAC69055.3| 371|Caenorhabditis elegans Ligand-gated
ion channel protein 1 protein.
Length = 371
Score = 32.3 bits (70), Expect = 0.45
Identities = 15/49 (30%), Positives = 26/49 (53%)
Frame = +3
Query: 180 PPDSKIVVNLTLHLRHANIRESESTVRIQADLQMNWIDKRLSWNAGEWG 326
PP +++ + + + L+ ++ E E V D W D+RL WN E+G
Sbjct: 51 PPITELKLTMAM-LKLVDVVEVEEKVTFLFDYLAEWTDQRLKWNPLEYG 98
>Z67737-2|CAA91537.3| 400|Caenorhabditis elegans Hypothetical
protein T01H10.2 protein.
Length = 400
Score = 31.1 bits (67), Expect = 1.1
Identities = 16/50 (32%), Positives = 23/50 (46%)
Frame = +3
Query: 165 YDRDSPPDSKIVVNLTLHLRHANIRESESTVRIQADLQMNWIDKRLSWNA 314
YD D+P + L L+ + E V + ++ W D RLSWNA
Sbjct: 64 YDPDAPKRYNYSIML-YSLKLVEVNEPAEKVAVVMEIMEYWYDIRLSWNA 112
>U39855-1|AAA81080.3| 615|Caenorhabditis elegans Hypothetical
protein F18G5.4 protein.
Length = 615
Score = 30.7 bits (66), Expect = 1.4
Identities = 11/28 (39%), Positives = 16/28 (57%)
Frame = +3
Query: 240 ESESTVRIQADLQMNWIDKRLSWNAGEW 323
E + ++ L +NW+D RLSWN W
Sbjct: 154 ERNQALTTRSWLNINWMDPRLSWNESLW 181
>AF000298-11|AAM97960.1| 518|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform b protein.
Length = 518
Score = 30.7 bits (66), Expect = 1.4
Identities = 21/71 (29%), Positives = 22/71 (30%)
Frame = +3
Query: 639 PPPXXXDPXLXPXRAXXPXNXAXXGKXPLXXXPXLXXXGXAXHPPXAWRGXGPLFXRGGX 818
PPP P L + P A P P G PP G P G
Sbjct: 240 PPPPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAG--GSPPPPRAGSP 297
Query: 819 XPPXPPXVXPP 851
PP PP PP
Sbjct: 298 PPPPPPRGSPP 308
>AF000298-10|AAM97961.1| 539|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform c protein.
Length = 539
Score = 30.7 bits (66), Expect = 1.4
Identities = 21/71 (29%), Positives = 22/71 (30%)
Frame = +3
Query: 639 PPPXXXDPXLXPXRAXXPXNXAXXGKXPLXXXPXLXXXGXAXHPPXAWRGXGPLFXRGGX 818
PPP P L + P A P P G PP G P G
Sbjct: 261 PPPPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAG--GSPPPPRAGSP 318
Query: 819 XPPXPPXVXPP 851
PP PP PP
Sbjct: 319 PPPPPPRGSPP 329
>AF000298-8|AAC48255.2| 524|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform a protein.
Length = 524
Score = 30.7 bits (66), Expect = 1.4
Identities = 21/71 (29%), Positives = 22/71 (30%)
Frame = +3
Query: 639 PPPXXXDPXLXPXRAXXPXNXAXXGKXPLXXXPXLXXXGXAXHPPXAWRGXGPLFXRGGX 818
PPP P L + P A P P G PP G P G
Sbjct: 246 PPPPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAG--GSPPPPRAGSP 303
Query: 819 XPPXPPXVXPP 851
PP PP PP
Sbjct: 304 PPPPPPRGSPP 314
>Z70266-4|CAA94206.3| 534|Caenorhabditis elegans Hypothetical
protein C40C9.2 protein.
Length = 534
Score = 29.9 bits (64), Expect = 2.4
Identities = 11/45 (24%), Positives = 26/45 (57%), Gaps = 1/45 (2%)
Frame = +3
Query: 195 IVVNLTLHLRHA-NIRESESTVRIQADLQMNWIDKRLSWNAGEWG 326
+VV++ ++L+ ++ E + + A ++ W D +L W+ E+G
Sbjct: 53 LVVSVKIYLQQILDVDEKNQVITLVAWIEYQWTDYKLKWDPSEYG 97
>U88167-6|AAB42223.1| 461|Caenorhabditis elegans Acetylcholine
receptor protein 11 protein.
Length = 461
Score = 29.9 bits (64), Expect = 2.4
Identities = 19/95 (20%), Positives = 40/95 (42%), Gaps = 5/95 (5%)
Frame = +3
Query: 57 LYYSXYRFLLTCAIASAAECENATSLSLMIDSLLATYDRDSPP----DSKIVVNLTLHLR 224
+ ++ +L+ I + C+ + + + + LL Y+ P + V + L L+
Sbjct: 1 MIFNLINSILSLVIIHSNLCDGSVAETKLFTDLLKGYNPLERPVQNSSQPLEVKIKLFLQ 60
Query: 225 HA-NIRESESTVRIQADLQMNWIDKRLSWNAGEWG 326
++ E V + A L W D +L W ++G
Sbjct: 61 QILDVDEKNQIVSVNAWLSYTWFDHKLQWEPKKYG 95
Score = 28.7 bits (61), Expect = 5.6
Identities = 10/17 (58%), Positives = 15/17 (88%)
Frame = +1
Query: 346 SSERLWRPDVVLLNAAA 396
SS+ +W+PDV+L N+AA
Sbjct: 105 SSDHIWKPDVLLYNSAA 121
>AC024207-2|AAL77193.1| 425|Caenorhabditis elegans Hypothetical
protein Y74E4A.1a protein.
Length = 425
Score = 29.9 bits (64), Expect = 2.4
Identities = 10/23 (43%), Positives = 15/23 (65%)
Frame = +3
Query: 255 VRIQADLQMNWIDKRLSWNAGEW 323
+ I L+++W D+RL WN EW
Sbjct: 101 MNINGFLKLSWKDRRLRWNPEEW 123
>AC024207-1|AAL77194.1| 428|Caenorhabditis elegans Hypothetical
protein Y74E4A.1b protein.
Length = 428
Score = 29.9 bits (64), Expect = 2.4
Identities = 10/23 (43%), Positives = 15/23 (65%)
Frame = +3
Query: 255 VRIQADLQMNWIDKRLSWNAGEW 323
+ I L+++W D+RL WN EW
Sbjct: 101 MNINGFLKLSWKDRRLRWNPEEW 123
>Z67737-4|CAA91539.2| 401|Caenorhabditis elegans Hypothetical
protein T01H10.5 protein.
Length = 401
Score = 29.5 bits (63), Expect = 3.2
Identities = 12/35 (34%), Positives = 18/35 (51%)
Frame = +3
Query: 207 LTLHLRHANIRESESTVRIQADLQMNWIDKRLSWN 311
L +L+ ++E V + +L W D RLSWN
Sbjct: 79 LLYYLKLVEVQEPAEKVSVVLELVERWYDPRLSWN 113
>AF288374-1|AAK83056.1| 502|Caenorhabditis elegans nicotinic
acetylcholine receptoralpha subunit protein.
Length = 502
Score = 29.5 bits (63), Expect = 3.2
Identities = 18/67 (26%), Positives = 33/67 (49%), Gaps = 5/67 (7%)
Frame = +3
Query: 141 MIDSLLATYDRDSPPDSK----IVVNLTLHLRHA-NIRESESTVRIQADLQMNWIDKRLS 305
+ + L+A Y++ P S+ +VV L L ++ E + LQ +W+D +L
Sbjct: 30 LFEDLIADYNKLVRPVSENGETLVVTFKLKLSQLLDVHEKNQIMTTNVWLQHSWMDYKLR 89
Query: 306 WNAGEWG 326
W+ E+G
Sbjct: 90 WDPVEYG 96
>AC006708-21|AAF60421.3| 502|Caenorhabditis elegans Uncoordinated
protein 63 protein.
Length = 502
Score = 29.5 bits (63), Expect = 3.2
Identities = 18/67 (26%), Positives = 33/67 (49%), Gaps = 5/67 (7%)
Frame = +3
Query: 141 MIDSLLATYDRDSPPDSK----IVVNLTLHLRHA-NIRESESTVRIQADLQMNWIDKRLS 305
+ + L+A Y++ P S+ +VV L L ++ E + LQ +W+D +L
Sbjct: 30 LFEDLIADYNKLVRPVSENGETLVVTFKLKLSQLLDVHEKNQIMTTNVWLQHSWMDYKLR 89
Query: 306 WNAGEWG 326
W+ E+G
Sbjct: 90 WDPVEYG 96
>Z92837-3|CAB07402.3| 502|Caenorhabditis elegans Hypothetical
protein R03E1.3 protein.
Length = 502
Score = 29.1 bits (62), Expect = 4.2
Identities = 12/39 (30%), Positives = 20/39 (51%), Gaps = 1/39 (2%)
Frame = +3
Query: 201 VNLTLHLRHAN-IRESESTVRIQADLQMNWIDKRLSWNA 314
VN+ L + H + E E T + + WID+ + W+A
Sbjct: 54 VNVFLSIAHVEKVDEHEQTALVHGHIWATWIDEYMQWDA 92
>X86403-1|CAA60157.1| 575|Caenorhabditis elegans nicotinic
acetylcholine receptor protein.
Length = 575
Score = 29.1 bits (62), Expect = 4.2
Identities = 11/32 (34%), Positives = 17/32 (53%)
Frame = +3
Query: 231 NIRESESTVRIQADLQMNWIDKRLSWNAGEWG 326
N+ E ++ L M W D +L+WN E+G
Sbjct: 99 NVDEKNQILQTNVWLTMKWNDFQLAWNPAEYG 130
>U23525-1|AAK71377.1| 575|Caenorhabditis elegans Acetylcholine
receptor protein 2 protein.
Length = 575
Score = 29.1 bits (62), Expect = 4.2
Identities = 11/32 (34%), Positives = 17/32 (53%)
Frame = +3
Query: 231 NIRESESTVRIQADLQMNWIDKRLSWNAGEWG 326
N+ E ++ L M W D +L+WN E+G
Sbjct: 99 NVDEKNQILQTNVWLTMKWNDFQLAWNPAEYG 130
>U10401-10|AAA19062.2| 476|Caenorhabditis elegans Hypothetical
protein T20B12.9 protein.
Length = 476
Score = 29.1 bits (62), Expect = 4.2
Identities = 22/69 (31%), Positives = 35/69 (50%), Gaps = 3/69 (4%)
Frame = +3
Query: 111 ECENATSLSLMIDSLLATYDRDSPPDSKIVVNLTLHLRHANIRE-SESTVRIQADLQMN- 284
E + +L +ID+LL YD P+++ VN+T+ L + SE T D+ +
Sbjct: 9 EFNSRINLGKLIDTLLTDYDTHLLPEAE-GVNVTIELHVQGVSGISEITGDFSLDVMYSE 67
Query: 285 -WIDKRLSW 308
W D RLS+
Sbjct: 68 IWQDPRLSF 76
>AF047656-7|AAC05108.2| 462|Caenorhabditis elegans Ligand-gated ion
channel protein 6 protein.
Length = 462
Score = 29.1 bits (62), Expect = 4.2
Identities = 17/74 (22%), Positives = 35/74 (47%), Gaps = 2/74 (2%)
Frame = +3
Query: 96 IASAAECENATSLSLMIDSLLATYDRD-SPPDSKIVVNLTLH-LRHANIRESESTVRIQA 269
+ + A E + + +L+ TYD D P D +V +T + ++ +++ T++
Sbjct: 17 LTAVAFLETSNTETLLQQLFNQTYDVDMKPSDDLTMVTITPNTFILLSMDQTQETIQYSE 76
Query: 270 DLQMNWIDKRLSWN 311
+ + W D L WN
Sbjct: 77 EFLLRWYDPILHWN 90
>AF016664-8|AAY44018.1| 397|Caenorhabditis elegans Hypothetical
protein D2062.12 protein.
Length = 397
Score = 29.1 bits (62), Expect = 4.2
Identities = 10/38 (26%), Positives = 21/38 (55%), Gaps = 1/38 (2%)
Frame = +3
Query: 213 LHLRHAN-IRESESTVRIQADLQMNWIDKRLSWNAGEW 323
LH+ H + I++ + +++ W+D+RL WN +
Sbjct: 62 LHVDHIHDIQDEQGVLKMALTFTFTWMDERLMWNPSNY 99
>Z99281-29|CAH04731.2| 438|Caenorhabditis elegans Hypothetical
protein Y57G11C.49 protein.
Length = 438
Score = 28.7 bits (61), Expect = 5.6
Identities = 17/81 (20%), Positives = 35/81 (43%), Gaps = 5/81 (6%)
Frame = +3
Query: 111 ECENATSLSLMIDSLLATYDRDSPP----DSKIVVNLTLH-LRHANIRESESTVRIQADL 275
E + T + D L+ YD P + +N++++ + + +E T+ +
Sbjct: 21 EIDGITVSEQLKDVLMEGYDSSIRPVINERDTLFINISINSMSFLTLDPAEETINFSGEF 80
Query: 276 QMNWIDKRLSWNAGEWGCSTW 338
+ W D+ L WN ++ TW
Sbjct: 81 ILQWKDEFLFWNKSDYNI-TW 100
>Z74044-1|CAA98550.1| 548|Caenorhabditis elegans Hypothetical
protein T26H10.1 protein.
Length = 548
Score = 28.7 bits (61), Expect = 5.6
Identities = 21/86 (24%), Positives = 40/86 (46%), Gaps = 5/86 (5%)
Frame = +3
Query: 81 LLTCAIASAAECENATSLSLMIDSLLATYDRDSPP--DSKIVVNLTLHL---RHANIRES 245
L T A A+ T + L+ D LL YD+ + P D+ +N++ + + + E
Sbjct: 10 LATTASLCIADTPVPTQIRLVHD-LLDNYDKKAKPMWDNSKPINVSFSMDLYQILELNEP 68
Query: 246 ESTVRIQADLQMNWIDKRLSWNAGEW 323
+ + + A + W D+ L WN ++
Sbjct: 69 QQYILLNAWIIERWFDEFLYWNPDDY 94
>Z74039-11|CAA98508.1| 548|Caenorhabditis elegans Hypothetical
protein T26H10.1 protein.
Length = 548
Score = 28.7 bits (61), Expect = 5.6
Identities = 21/86 (24%), Positives = 40/86 (46%), Gaps = 5/86 (5%)
Frame = +3
Query: 81 LLTCAIASAAECENATSLSLMIDSLLATYDRDSPP--DSKIVVNLTLHL---RHANIRES 245
L T A A+ T + L+ D LL YD+ + P D+ +N++ + + + E
Sbjct: 10 LATTASLCIADTPVPTQIRLVHD-LLDNYDKKAKPMWDNSKPINVSFSMDLYQILELNEP 68
Query: 246 ESTVRIQADLQMNWIDKRLSWNAGEW 323
+ + + A + W D+ L WN ++
Sbjct: 69 QQYILLNAWIIERWFDEFLYWNPDDY 94
>AF077307-1|AAC98095.1| 548|Caenorhabditis elegans acetyl choline
receptor alpha subunitDES-2 protein.
Length = 548
Score = 28.7 bits (61), Expect = 5.6
Identities = 21/86 (24%), Positives = 40/86 (46%), Gaps = 5/86 (5%)
Frame = +3
Query: 81 LLTCAIASAAECENATSLSLMIDSLLATYDRDSPP--DSKIVVNLTLHL---RHANIRES 245
L T A A+ T + L+ D LL YD+ + P D+ +N++ + + + E
Sbjct: 10 LATTASLCIADTPVPTQIRLVHD-LLDNYDKKAKPMWDNSKPINVSFSMDLYQILELNEP 68
Query: 246 ESTVRIQADLQMNWIDKRLSWNAGEW 323
+ + + A + W D+ L WN ++
Sbjct: 69 QQYILLNAWIIERWFDEFLYWNPDDY 94
>Z67737-3|CAA91538.2| 399|Caenorhabditis elegans Hypothetical
protein T01H10.3 protein.
Length = 399
Score = 28.3 bits (60), Expect = 7.4
Identities = 13/53 (24%), Positives = 25/53 (47%)
Frame = +3
Query: 165 YDRDSPPDSKIVVNLTLHLRHANIRESESTVRIQADLQMNWIDKRLSWNAGEW 323
+D D+P + L L+ + E + V + ++ W D RL+WN ++
Sbjct: 65 HDPDAPGRWNYTL-LLFSLKLVEVTEPQEKVSVVMEVMEYWFDARLTWNKEDY 116
>U50310-5|AAA92541.1| 318|Caenorhabditis elegans Ground-like (grd
related) protein 9 protein.
Length = 318
Score = 28.3 bits (60), Expect = 7.4
Identities = 10/28 (35%), Positives = 13/28 (46%)
Frame = +3
Query: 768 PPXAWRGXGPLFXRGGXXPPXPPXVXPP 851
PP ++ GP + PP PP PP
Sbjct: 119 PPVQYQNQGPQYIEAPPPPPSPPPPPPP 146
>AF106582-1|AAC78217.3| 1424|Caenorhabditis elegans Hypothetical
protein W05F2.7 protein.
Length = 1424
Score = 28.3 bits (60), Expect = 7.4
Identities = 10/21 (47%), Positives = 12/21 (57%)
Frame = +3
Query: 291 DKRLSWNAGEWGCSTWAGVLG 353
D + W AG+W STW V G
Sbjct: 895 DPGIIWKAGDWISSTWHSVFG 915
>AF016674-6|AAB66129.1| 530|Caenorhabditis elegans Hypothetical
protein C03H5.6 protein.
Length = 530
Score = 28.3 bits (60), Expect = 7.4
Identities = 12/34 (35%), Positives = 16/34 (47%), Gaps = 1/34 (2%)
Frame = +2
Query: 284 LDRQTTELERRGVGLQHLGWCP-RNACGGLTWYC 382
+DR L+ G+ H C N CG +TW C
Sbjct: 310 MDRLGVLLDNPGLQTHHCSRCKVTNTCGAVTWMC 343
>AC084197-42|AAU87806.2| 544|Caenorhabditis elegans Acetylcholine
receptor protein 25 protein.
Length = 544
Score = 28.3 bits (60), Expect = 7.4
Identities = 12/45 (26%), Positives = 24/45 (53%), Gaps = 1/45 (2%)
Frame = +3
Query: 195 IVVNLTLHLRH-ANIRESESTVRIQADLQMNWIDKRLSWNAGEWG 326
++V + L L+ ++ E V + A L+ +W+D L W ++G
Sbjct: 51 VMVKMGLVLQQIVDVDEKNQVVDVNAWLKFSWVDYSLKWKPEDYG 95
>Z83104-2|CAB54203.1| 563|Caenorhabditis elegans Hypothetical
protein F09B12.1b protein.
Length = 563
Score = 27.9 bits (59), Expect = 9.8
Identities = 13/30 (43%), Positives = 18/30 (60%)
Frame = +2
Query: 125 NITVPHDRLAPRNVRSGLPPRLQNRSQPDP 214
N+ P D+L + SG+P +LQNR P P
Sbjct: 114 NVPPPDDQL-DWQIASGVPVQLQNRGVPQP 142
>Z83104-1|CAB54204.1| 573|Caenorhabditis elegans Hypothetical
protein F09B12.1a protein.
Length = 573
Score = 27.9 bits (59), Expect = 9.8
Identities = 13/30 (43%), Positives = 18/30 (60%)
Frame = +2
Query: 125 NITVPHDRLAPRNVRSGLPPRLQNRSQPDP 214
N+ P D+L + SG+P +LQNR P P
Sbjct: 124 NVPPPDDQL-DWQIASGVPVQLQNRGVPQP 152
>Z81102-3|CAB03201.2| 189|Caenorhabditis elegans Hypothetical
protein M02B1.2 protein.
Length = 189
Score = 27.9 bits (59), Expect = 9.8
Identities = 17/49 (34%), Positives = 25/49 (51%), Gaps = 4/49 (8%)
Frame = -3
Query: 398 VAAAFSSTT-SGLHKRSED---TSPSAAAPLPCVPTQSFVDPIHLKICL 264
++ AF+ T LH + ED P+ PCVP ++F +L ICL
Sbjct: 101 ISFAFTLTVRKRLHLKLEDIWRNKPNCLEGQPCVPLETFRSSENLLICL 149
>Z70205-8|CAO78730.1| 270|Caenorhabditis elegans Hypothetical
protein C11H1.4b protein.
Length = 270
Score = 27.9 bits (59), Expect = 9.8
Identities = 16/57 (28%), Positives = 26/57 (45%)
Frame = -3
Query: 314 CVPTQSFVDPIHLKICLYSHGGLGLTNVSMSQMQGQVDYDFGVGGGVPIVRCEERVD 144
C P F D + H G+T+ ++Q+ ++D G GV I+ C R+D
Sbjct: 94 CAPCILFFDELDSLAPKRGHDSTGVTDRVVNQLLTELDGAEGGMKGVIILGCTSRID 150
>Z70205-7|CAA94120.2| 996|Caenorhabditis elegans Hypothetical
protein C11H1.4a protein.
Length = 996
Score = 27.9 bits (59), Expect = 9.8
Identities = 16/57 (28%), Positives = 26/57 (45%)
Frame = -3
Query: 314 CVPTQSFVDPIHLKICLYSHGGLGLTNVSMSQMQGQVDYDFGVGGGVPIVRCEERVD 144
C P F D + H G+T+ ++Q+ ++D G GV I+ C R+D
Sbjct: 820 CAPCILFFDELDSLAPKRGHDSTGVTDRVVNQLLTELDGAEGGMKGVIILGCTSRID 876
>Z67735-2|CAA91530.2| 403|Caenorhabditis elegans Hypothetical
protein C15A7.1 protein.
Length = 403
Score = 27.9 bits (59), Expect = 9.8
Identities = 12/60 (20%), Positives = 26/60 (43%), Gaps = 1/60 (1%)
Frame = +3
Query: 147 DSLLATYDRDSPPDSKIVVNLTLHLRH-ANIRESESTVRIQADLQMNWIDKRLSWNAGEW 323
+ +L D P + + + L L H + + E + + ++ W D+RL W+ +
Sbjct: 39 EDVLGPLDGSMPSELPVFIGAQLKLDHISRVDEKTGFLTLALTVKFMWSDERLQWDPSHY 98
>U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis defect
protein 1, isoformb protein.
Length = 1437
Score = 27.9 bits (59), Expect = 9.8
Identities = 19/71 (26%), Positives = 22/71 (30%)
Frame = +3
Query: 639 PPPXXXDPXLXPXRAXXPXNXAXXGKXPLXXXPXLXXXGXAXHPPXAWRGXGPLFXRGGX 818
PPP L P P G P+ P PP P +GG
Sbjct: 726 PPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPP-PPPPPGGFKGGP 784
Query: 819 XPPXPPXVXPP 851
PP PP + P
Sbjct: 785 PPPPPPGMFAP 795
>U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis defect
protein 1, isoforma protein.
Length = 1435
Score = 27.9 bits (59), Expect = 9.8
Identities = 19/71 (26%), Positives = 22/71 (30%)
Frame = +3
Query: 639 PPPXXXDPXLXPXRAXXPXNXAXXGKXPLXXXPXLXXXGXAXHPPXAWRGXGPLFXRGGX 818
PPP L P P G P+ P PP P +GG
Sbjct: 726 PPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPP-PPPPPGGFKGGP 784
Query: 819 XPPXPPXVXPP 851
PP PP + P
Sbjct: 785 PPPPPPGMFAP 795
>AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein.
Length = 1018
Score = 27.9 bits (59), Expect = 9.8
Identities = 19/71 (26%), Positives = 22/71 (30%)
Frame = +3
Query: 639 PPPXXXDPXLXPXRAXXPXNXAXXGKXPLXXXPXLXXXGXAXHPPXAWRGXGPLFXRGGX 818
PPP L P P G P+ P PP P +GG
Sbjct: 309 PPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPP-PPPPPGGFKGGP 367
Query: 819 XPPXPPXVXPP 851
PP PP + P
Sbjct: 368 PPPPPPGMFAP 378
>AB054992-1|BAB62002.1| 996|Caenorhabditis elegans peroxin protein.
Length = 996
Score = 27.9 bits (59), Expect = 9.8
Identities = 16/57 (28%), Positives = 26/57 (45%)
Frame = -3
Query: 314 CVPTQSFVDPIHLKICLYSHGGLGLTNVSMSQMQGQVDYDFGVGGGVPIVRCEERVD 144
C P F D + H G+T+ ++Q+ ++D G GV I+ C R+D
Sbjct: 820 CAPCILFFDELDSLAPKRGHDSTGVTDRVVNQLLTELDGAEGGMKGVIILGCTSRID 876
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,272,115
Number of Sequences: 27780
Number of extensions: 282297
Number of successful extensions: 1057
Number of sequences better than 10.0: 66
Number of HSP's better than 10.0 without gapping: 929
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1039
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2139963672
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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