Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP11_FL5_M04
         (813 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

X17568-1|CAB57868.1|  240|Homo sapiens snRNP B' protein protein.       31   5.0  
X17567-1|CAB57867.1|  231|Homo sapiens snRNP B protein protein.        31   5.0  
X15893-1|CAA33902.1|  231|Homo sapiens protein ( Human B cod gen...    31   5.0  
M34082-1|AAA36579.1|  233|Homo sapiens protein ( Human small nuc...    31   5.0  
M34081-1|AAA36578.1|  224|Homo sapiens protein ( Human small nuc...    31   5.0  
CR456969-1|CAG33250.1|  240|Homo sapiens SNRPB protein.                31   5.0  
BC080516-1|AAH80516.1|  231|Homo sapiens small nuclear ribonucle...    31   5.0  
BC003530-1|AAH03530.1|  234|Homo sapiens SNRPB protein protein.        31   5.0  
AY742712-1|AAU89981.1|  231|Homo sapiens small nuclear ribonucle...    31   5.0  
AL049650-8|CAB46715.1|  240|Homo sapiens small nuclear ribonucle...    31   5.0  
AL049650-7|CAB46714.1|  231|Homo sapiens small nuclear ribonucle...    31   5.0  
Z46389-1|CAA86523.1|  380|Homo sapiens vasodilator-stimulated ph...    30   8.7  
X98534-1|CAA67147.2|  378|Homo sapiens vasodilator-stimulated ph...    30   8.7  
DQ067453-1|AAZ23040.1| 1262|Homo sapiens diaphanous-1 protein.         30   8.7  
DQ067452-1|AAZ23039.1|  229|Homo sapiens diaphanous-1 protein.         30   8.7  
BC117257-1|AAI17258.1| 1262|Homo sapiens diaphanous homolog 1 (D...    30   8.7  
BC038224-1|AAH38224.1|  380|Homo sapiens vasodilator-stimulated ...    30   8.7  
BC026019-1|AAH26019.1|  380|Homo sapiens vasodilator-stimulated ...    30   8.7  
AY363395-1|AAQ63049.1| 1272|Homo sapiens diaphanous 1 protein.         30   8.7  
AY360322-1|AAQ64023.1|  179|Homo sapiens diaphanous 1 protein.         30   8.7  
AF051782-1|AAC05373.1| 1248|Homo sapiens diaphanous 1 protein.         30   8.7  
AB209482-1|BAD92719.1| 1299|Homo sapiens Diaphanous 1 variant pr...    30   8.7  

>X17568-1|CAB57868.1|  240|Homo sapiens snRNP B' protein protein.
          Length = 240

 Score = 31.1 bits (67), Expect = 5.0
 Identities = 16/34 (47%), Positives = 17/34 (50%)
 Frame = +3

Query: 408 GGPPPXGGSXXPPPGFFXXGXPPXXKXXGGLXPP 509
           GGPPP  G   PPPG    G PP  +   G  PP
Sbjct: 173 GGPPPPMGRGAPPPGMM--GPPPGMRPPMG--PP 202


>X17567-1|CAB57867.1|  231|Homo sapiens snRNP B protein protein.
          Length = 231

 Score = 31.1 bits (67), Expect = 5.0
 Identities = 16/34 (47%), Positives = 17/34 (50%)
 Frame = +3

Query: 408 GGPPPXGGSXXPPPGFFXXGXPPXXKXXGGLXPP 509
           GGPPP  G   PPPG    G PP  +   G  PP
Sbjct: 173 GGPPPPMGRGAPPPGMM--GPPPGMRPPMG--PP 202


>X15893-1|CAA33902.1|  231|Homo sapiens protein ( Human B cod gene
           for B/B' snRNP associated protein. ).
          Length = 231

 Score = 31.1 bits (67), Expect = 5.0
 Identities = 16/34 (47%), Positives = 17/34 (50%)
 Frame = +3

Query: 408 GGPPPXGGSXXPPPGFFXXGXPPXXKXXGGLXPP 509
           GGPPP  G   PPPG    G PP  +   G  PP
Sbjct: 173 GGPPPPMGRGAPPPGMM--GPPPGMRPPMG--PP 202


>M34082-1|AAA36579.1|  233|Homo sapiens protein ( Human small
           nuclear ribonucleoprotein particle SmB' mRNA, 3' end. ).
          Length = 233

 Score = 31.1 bits (67), Expect = 5.0
 Identities = 16/34 (47%), Positives = 17/34 (50%)
 Frame = +3

Query: 408 GGPPPXGGSXXPPPGFFXXGXPPXXKXXGGLXPP 509
           GGPPP  G   PPPG    G PP  +   G  PP
Sbjct: 166 GGPPPPMGRGAPPPGMM--GPPPGMRPPMG--PP 195


>M34081-1|AAA36578.1|  224|Homo sapiens protein ( Human small
           nuclear ribonucleoprotein particle SmB mRNA, 3' end. ).
          Length = 224

 Score = 31.1 bits (67), Expect = 5.0
 Identities = 16/34 (47%), Positives = 17/34 (50%)
 Frame = +3

Query: 408 GGPPPXGGSXXPPPGFFXXGXPPXXKXXGGLXPP 509
           GGPPP  G   PPPG    G PP  +   G  PP
Sbjct: 166 GGPPPPMGRGAPPPGMM--GPPPGMRPPMG--PP 195


>CR456969-1|CAG33250.1|  240|Homo sapiens SNRPB protein.
          Length = 240

 Score = 31.1 bits (67), Expect = 5.0
 Identities = 16/34 (47%), Positives = 17/34 (50%)
 Frame = +3

Query: 408 GGPPPXGGSXXPPPGFFXXGXPPXXKXXGGLXPP 509
           GGPPP  G   PPPG    G PP  +   G  PP
Sbjct: 173 GGPPPPMGRGAPPPGMM--GPPPGMRPPMG--PP 202


>BC080516-1|AAH80516.1|  231|Homo sapiens small nuclear
           ribonucleoprotein polypeptides B and B1 protein.
          Length = 231

 Score = 31.1 bits (67), Expect = 5.0
 Identities = 16/34 (47%), Positives = 17/34 (50%)
 Frame = +3

Query: 408 GGPPPXGGSXXPPPGFFXXGXPPXXKXXGGLXPP 509
           GGPPP  G   PPPG    G PP  +   G  PP
Sbjct: 173 GGPPPPMGRGAPPPGMM--GPPPGMRPPMG--PP 202


>BC003530-1|AAH03530.1|  234|Homo sapiens SNRPB protein protein.
          Length = 234

 Score = 31.1 bits (67), Expect = 5.0
 Identities = 16/34 (47%), Positives = 17/34 (50%)
 Frame = +3

Query: 408 GGPPPXGGSXXPPPGFFXXGXPPXXKXXGGLXPP 509
           GGPPP  G   PPPG    G PP  +   G  PP
Sbjct: 173 GGPPPPMGRGAPPPGMM--GPPPGMRPPMG--PP 202


>AY742712-1|AAU89981.1|  231|Homo sapiens small nuclear
           ribonucleoprotein polypeptide B protein.
          Length = 231

 Score = 31.1 bits (67), Expect = 5.0
 Identities = 16/34 (47%), Positives = 17/34 (50%)
 Frame = +3

Query: 408 GGPPPXGGSXXPPPGFFXXGXPPXXKXXGGLXPP 509
           GGPPP  G   PPPG    G PP  +   G  PP
Sbjct: 173 GGPPPPMGRGAPPPGMM--GPPPGMRPPMG--PP 202


>AL049650-8|CAB46715.1|  240|Homo sapiens small nuclear
           ribonucleoprotein polypeptides B and B1 protein.
          Length = 240

 Score = 31.1 bits (67), Expect = 5.0
 Identities = 16/34 (47%), Positives = 17/34 (50%)
 Frame = +3

Query: 408 GGPPPXGGSXXPPPGFFXXGXPPXXKXXGGLXPP 509
           GGPPP  G   PPPG    G PP  +   G  PP
Sbjct: 173 GGPPPPMGRGAPPPGMM--GPPPGMRPPMG--PP 202


>AL049650-7|CAB46714.1|  231|Homo sapiens small nuclear
           ribonucleoprotein polypeptides B and B1 protein.
          Length = 231

 Score = 31.1 bits (67), Expect = 5.0
 Identities = 16/34 (47%), Positives = 17/34 (50%)
 Frame = +3

Query: 408 GGPPPXGGSXXPPPGFFXXGXPPXXKXXGGLXPP 509
           GGPPP  G   PPPG    G PP  +   G  PP
Sbjct: 173 GGPPPPMGRGAPPPGMM--GPPPGMRPPMG--PP 202


>Z46389-1|CAA86523.1|  380|Homo sapiens vasodilator-stimulated
           phosphoprotein (VASP) protein.
          Length = 380

 Score = 30.3 bits (65), Expect = 8.7
 Identities = 15/33 (45%), Positives = 15/33 (45%)
 Frame = +3

Query: 411 GPPPXGGSXXPPPGFFXXGXPPXXKXXGGLXPP 509
           GPPP  G   PPPG    G P      GG  PP
Sbjct: 175 GPPPPPGPP-PPPGLPPSGVPAAAHGAGGGPPP 206


>X98534-1|CAA67147.2|  378|Homo sapiens vasodilator-stimulated
           phosphoprotein protein.
          Length = 378

 Score = 30.3 bits (65), Expect = 8.7
 Identities = 15/33 (45%), Positives = 15/33 (45%)
 Frame = +3

Query: 411 GPPPXGGSXXPPPGFFXXGXPPXXKXXGGLXPP 509
           GPPP  G   PPPG    G P      GG  PP
Sbjct: 173 GPPPPPGPP-PPPGLPPSGVPAAAHGAGGGPPP 204


>DQ067453-1|AAZ23040.1| 1262|Homo sapiens diaphanous-1 protein.
          Length = 1262

 Score = 30.3 bits (65), Expect = 8.7
 Identities = 16/42 (38%), Positives = 16/42 (38%)
 Frame = +3

Query: 381 PXXXFXXXGGGPPPXGGSXXPPPGFFXXGXPPXXKXXGGLXP 506
           P   F    G PPP  G   PPP  F  G P       GL P
Sbjct: 718 PPPPFPGGPGIPPPPPGMGMPPPPPFGFGVPAAPVLPFGLTP 759


>DQ067452-1|AAZ23039.1|  229|Homo sapiens diaphanous-1 protein.
          Length = 229

 Score = 30.3 bits (65), Expect = 8.7
 Identities = 16/42 (38%), Positives = 16/42 (38%)
 Frame = +3

Query: 381 PXXXFXXXGGGPPPXGGSXXPPPGFFXXGXPPXXKXXGGLXP 506
           P   F    G PPP  G   PPP  F  G P       GL P
Sbjct: 112 PPPPFPGGPGIPPPPPGMGMPPPPPFGFGVPAAPVLPFGLTP 153


>BC117257-1|AAI17258.1| 1262|Homo sapiens diaphanous homolog 1
           (Drosophila) protein.
          Length = 1262

 Score = 30.3 bits (65), Expect = 8.7
 Identities = 16/42 (38%), Positives = 16/42 (38%)
 Frame = +3

Query: 381 PXXXFXXXGGGPPPXGGSXXPPPGFFXXGXPPXXKXXGGLXP 506
           P   F    G PPP  G   PPP  F  G P       GL P
Sbjct: 718 PPPPFPGGPGIPPPPPGMGMPPPPPFGFGVPAAPVLPFGLTP 759


>BC038224-1|AAH38224.1|  380|Homo sapiens vasodilator-stimulated
           phosphoprotein protein.
          Length = 380

 Score = 30.3 bits (65), Expect = 8.7
 Identities = 15/33 (45%), Positives = 15/33 (45%)
 Frame = +3

Query: 411 GPPPXGGSXXPPPGFFXXGXPPXXKXXGGLXPP 509
           GPPP  G   PPPG    G P      GG  PP
Sbjct: 175 GPPPPPGPP-PPPGLPPSGVPAAAHGAGGGPPP 206


>BC026019-1|AAH26019.1|  380|Homo sapiens vasodilator-stimulated
           phosphoprotein protein.
          Length = 380

 Score = 30.3 bits (65), Expect = 8.7
 Identities = 15/33 (45%), Positives = 15/33 (45%)
 Frame = +3

Query: 411 GPPPXGGSXXPPPGFFXXGXPPXXKXXGGLXPP 509
           GPPP  G   PPPG    G P      GG  PP
Sbjct: 176 GPPPPPGPP-PPPGLPPSGVPAAAHGAGGGPPP 207


>AY363395-1|AAQ63049.1| 1272|Homo sapiens diaphanous 1 protein.
          Length = 1272

 Score = 30.3 bits (65), Expect = 8.7
 Identities = 16/42 (38%), Positives = 16/42 (38%)
 Frame = +3

Query: 381 PXXXFXXXGGGPPPXGGSXXPPPGFFXXGXPPXXKXXGGLXP 506
           P   F    G PPP  G   PPP  F  G P       GL P
Sbjct: 728 PPPPFPGGPGIPPPPPGMGMPPPPPFGFGVPAAPVLPFGLTP 769


>AY360322-1|AAQ64023.1|  179|Homo sapiens diaphanous 1 protein.
          Length = 179

 Score = 30.3 bits (65), Expect = 8.7
 Identities = 16/42 (38%), Positives = 16/42 (38%)
 Frame = +3

Query: 381 PXXXFXXXGGGPPPXGGSXXPPPGFFXXGXPPXXKXXGGLXP 506
           P   F    G PPP  G   PPP  F  G P       GL P
Sbjct: 112 PPPPFPGGPGIPPPPPGMGMPPPPPFGFGVPAAPVLPFGLTP 153


>AF051782-1|AAC05373.1| 1248|Homo sapiens diaphanous 1 protein.
          Length = 1248

 Score = 30.3 bits (65), Expect = 8.7
 Identities = 16/42 (38%), Positives = 16/42 (38%)
 Frame = +3

Query: 381 PXXXFXXXGGGPPPXGGSXXPPPGFFXXGXPPXXKXXGGLXP 506
           P   F    G PPP  G   PPP  F  G P       GL P
Sbjct: 707 PPPPFPGGPGIPPPPPGMGMPPPPPFGFGVPAAPVLPFGLTP 748


>AB209482-1|BAD92719.1| 1299|Homo sapiens Diaphanous 1 variant
           protein.
          Length = 1299

 Score = 30.3 bits (65), Expect = 8.7
 Identities = 16/42 (38%), Positives = 16/42 (38%)
 Frame = +3

Query: 381 PXXXFXXXGGGPPPXGGSXXPPPGFFXXGXPPXXKXXGGLXP 506
           P   F    G PPP  G   PPP  F  G P       GL P
Sbjct: 755 PPPPFPGGPGIPPPPPGMGMPPPPPFGFGVPAAPVLPFGLTP 796


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 73,350,049
Number of Sequences: 237096
Number of extensions: 1489533
Number of successful extensions: 4981
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 2147
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4330
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 10092110758
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)