Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP11_FL5_M04
(813 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY094861-1|AAM11214.1| 362|Drosophila melanogaster RE22192p pro... 32 0.81
AE014297-3653|AAF56353.1| 362|Drosophila melanogaster CG7016-PA... 32 0.81
AY060415-1|AAL25454.1| 463|Drosophila melanogaster LD37240p pro... 32 1.1
AL009195-3|CAA15702.1| 463|Drosophila melanogaster EG:30B8.5,FB... 32 1.1
AE014298-367|AAF45758.1| 463|Drosophila melanogaster CG3218-PA ... 32 1.1
AE014298-1168|AAF46366.1| 926|Drosophila melanogaster CG10555-P... 30 3.3
AY069683-1|AAL39828.1| 993|Drosophila melanogaster LD45449p pro... 30 4.3
AE014298-2035|AAF48374.1| 993|Drosophila melanogaster CG9411-PA... 30 4.3
U02042-1|AAA19249.1| 606|Drosophila melanogaster GABA receptor ... 29 10.0
M69057-3|AAA28558.1| 595|Drosophila melanogaster GABA-alpha rec... 29 10.0
M69057-2|AAA28557.1| 601|Drosophila melanogaster GABA-alpha rec... 29 10.0
M69057-1|AAA28556.1| 606|Drosophila melanogaster GABA-alpha rec... 29 10.0
AE014296-1598|AAN11989.1| 585|Drosophila melanogaster CG10537-P... 29 10.0
AE014296-1597|AAF50311.1| 606|Drosophila melanogaster CG10537-P... 29 10.0
AE014296-1596|AAN11988.1| 606|Drosophila melanogaster CG10537-P... 29 10.0
>AY094861-1|AAM11214.1| 362|Drosophila melanogaster RE22192p
protein.
Length = 362
Score = 32.3 bits (70), Expect = 0.81
Identities = 18/41 (43%), Positives = 19/41 (46%), Gaps = 6/41 (14%)
Frame = +3
Query: 405 GGGPPPX-----GGSXXPP-PGFFXXGXPPXXKXXGGLXPP 509
GGGPPP GG PP PG+ G PP G PP
Sbjct: 173 GGGPPPPRPGWNGGGPPPPMPGWNGGGPPPPRPGWNGGGPP 213
Score = 32.3 bits (70), Expect = 0.81
Identities = 21/52 (40%), Positives = 21/52 (40%), Gaps = 6/52 (11%)
Frame = -3
Query: 508 GGXXPPXFFXXGGXPXXKNPG--GGXXLPP----XGGGPPPXXKKXXXGXPQ 371
GG PP GG P PG GG PP GGGPPP G Q
Sbjct: 174 GGPPPPRPGWNGGGPPPPMPGWNGGGPPPPRPGWNGGGPPPPRPGWNGGMEQ 225
Score = 29.9 bits (64), Expect = 4.3
Identities = 17/40 (42%), Positives = 18/40 (45%), Gaps = 5/40 (12%)
Frame = +3
Query: 405 GGGPPPX----GGSXXPP-PGFFXXGXPPXXKXXGGLXPP 509
G GPPP GG PP PG+ G PP G PP
Sbjct: 162 GRGPPPRPGFNGGGPPPPRPGWNGGGPPPPMPGWNGGGPP 201
Score = 29.5 bits (63), Expect = 5.7
Identities = 18/47 (38%), Positives = 19/47 (40%), Gaps = 6/47 (12%)
Frame = +3
Query: 375 GXPXXXFXXXGGGPPPX-----GGSXXPP-PGFFXXGXPPXXKXXGG 497
G P GGGPPP GG PP PG+ G PP G
Sbjct: 175 GPPPPRPGWNGGGPPPPMPGWNGGGPPPPRPGWNGGGPPPPRPGWNG 221
>AE014297-3653|AAF56353.1| 362|Drosophila melanogaster CG7016-PA
protein.
Length = 362
Score = 32.3 bits (70), Expect = 0.81
Identities = 18/41 (43%), Positives = 19/41 (46%), Gaps = 6/41 (14%)
Frame = +3
Query: 405 GGGPPPX-----GGSXXPP-PGFFXXGXPPXXKXXGGLXPP 509
GGGPPP GG PP PG+ G PP G PP
Sbjct: 173 GGGPPPPRPGWNGGGPPPPMPGWNGGGPPPPRPGWNGGGPP 213
Score = 32.3 bits (70), Expect = 0.81
Identities = 21/52 (40%), Positives = 21/52 (40%), Gaps = 6/52 (11%)
Frame = -3
Query: 508 GGXXPPXFFXXGGXPXXKNPG--GGXXLPP----XGGGPPPXXKKXXXGXPQ 371
GG PP GG P PG GG PP GGGPPP G Q
Sbjct: 174 GGPPPPRPGWNGGGPPPPMPGWNGGGPPPPRPGWNGGGPPPPRPGWNGGMEQ 225
Score = 29.9 bits (64), Expect = 4.3
Identities = 17/40 (42%), Positives = 18/40 (45%), Gaps = 5/40 (12%)
Frame = +3
Query: 405 GGGPPPX----GGSXXPP-PGFFXXGXPPXXKXXGGLXPP 509
G GPPP GG PP PG+ G PP G PP
Sbjct: 162 GRGPPPRPGFNGGGPPPPRPGWNGGGPPPPMPGWNGGGPP 201
Score = 29.5 bits (63), Expect = 5.7
Identities = 18/47 (38%), Positives = 19/47 (40%), Gaps = 6/47 (12%)
Frame = +3
Query: 375 GXPXXXFXXXGGGPPPX-----GGSXXPP-PGFFXXGXPPXXKXXGG 497
G P GGGPPP GG PP PG+ G PP G
Sbjct: 175 GPPPPRPGWNGGGPPPPMPGWNGGGPPPPRPGWNGGGPPPPRPGWNG 221
>AY060415-1|AAL25454.1| 463|Drosophila melanogaster LD37240p
protein.
Length = 463
Score = 31.9 bits (69), Expect = 1.1
Identities = 14/34 (41%), Positives = 15/34 (44%)
Frame = +2
Query: 407 GXXXPXGGKPXPPPXVFXXRXXPPXKKXGGXXPP 508
G P GG P PPP +F R P G PP
Sbjct: 276 GPMGPMGGPPPPPPPLFMRRNGPGPGPMMGVPPP 309
>AL009195-3|CAA15702.1| 463|Drosophila melanogaster
EG:30B8.5,FBgn0000810;fs(1)K10 protein.
Length = 463
Score = 31.9 bits (69), Expect = 1.1
Identities = 14/34 (41%), Positives = 15/34 (44%)
Frame = +2
Query: 407 GXXXPXGGKPXPPPXVFXXRXXPPXKKXGGXXPP 508
G P GG P PPP +F R P G PP
Sbjct: 276 GPMGPMGGPPPPPPPLFMRRNGPGPGPMMGVPPP 309
>AE014298-367|AAF45758.1| 463|Drosophila melanogaster CG3218-PA
protein.
Length = 463
Score = 31.9 bits (69), Expect = 1.1
Identities = 14/34 (41%), Positives = 15/34 (44%)
Frame = +2
Query: 407 GXXXPXGGKPXPPPXVFXXRXXPPXKKXGGXXPP 508
G P GG P PPP +F R P G PP
Sbjct: 276 GPMGPMGGPPPPPPPLFMRRNGPGPGPMMGVPPP 309
>AE014298-1168|AAF46366.1| 926|Drosophila melanogaster CG10555-PA
protein.
Length = 926
Score = 30.3 bits (65), Expect = 3.3
Identities = 15/34 (44%), Positives = 15/34 (44%), Gaps = 2/34 (5%)
Frame = +3
Query: 411 GPPPXGGSXXPPPG--FFXXGXPPXXKXXGGLXP 506
G PP GG PPPG G PP GG P
Sbjct: 563 GQPPTGGQQQPPPGPPQSQYGPPPPQNSAGGPPP 596
>AY069683-1|AAL39828.1| 993|Drosophila melanogaster LD45449p
protein.
Length = 993
Score = 29.9 bits (64), Expect = 4.3
Identities = 14/35 (40%), Positives = 14/35 (40%)
Frame = +3
Query: 405 GGGPPPXGGSXXPPPGFFXXGXPPXXKXXGGLXPP 509
G PPP G PPP G PP G PP
Sbjct: 467 GPPPPPSGNYGPPPPPSGNYGPPPPPSGNYGPPPP 501
Score = 29.1 bits (62), Expect = 7.6
Identities = 13/32 (40%), Positives = 13/32 (40%)
Frame = +3
Query: 414 PPPXGGSXXPPPGFFXXGXPPXXKXXGGLXPP 509
PPP G PPP G PP G PP
Sbjct: 460 PPPSGNYGPPPPPSGNYGPPPPPSGNYGPPPP 491
Score = 28.7 bits (61), Expect = 10.0
Identities = 13/35 (37%), Positives = 14/35 (40%)
Frame = +3
Query: 372 WGXPXXXFXXXGGGPPPXGGSXXPPPGFFXXGXPP 476
+G P G PPP G PPP G PP
Sbjct: 466 YGPPPPPSGNYGPPPPPSGNYGPPPPPSGNYGPPP 500
>AE014298-2035|AAF48374.1| 993|Drosophila melanogaster CG9411-PA
protein.
Length = 993
Score = 29.9 bits (64), Expect = 4.3
Identities = 14/35 (40%), Positives = 14/35 (40%)
Frame = +3
Query: 405 GGGPPPXGGSXXPPPGFFXXGXPPXXKXXGGLXPP 509
G PPP G PPP G PP G PP
Sbjct: 467 GPPPPPSGNYGPPPPPSGNYGPPPPPSGNYGPPPP 501
Score = 29.1 bits (62), Expect = 7.6
Identities = 13/32 (40%), Positives = 13/32 (40%)
Frame = +3
Query: 414 PPPXGGSXXPPPGFFXXGXPPXXKXXGGLXPP 509
PPP G PPP G PP G PP
Sbjct: 460 PPPSGNYGPPPPPSGNYGPPPPPSGNYGPPPP 491
Score = 28.7 bits (61), Expect = 10.0
Identities = 13/35 (37%), Positives = 14/35 (40%)
Frame = +3
Query: 372 WGXPXXXFXXXGGGPPPXGGSXXPPPGFFXXGXPP 476
+G P G PPP G PPP G PP
Sbjct: 466 YGPPPPPSGNYGPPPPPSGNYGPPPPPSGNYGPPP 500
>U02042-1|AAA19249.1| 606|Drosophila melanogaster GABA receptor
protein.
Length = 606
Score = 28.7 bits (61), Expect = 10.0
Identities = 12/23 (52%), Positives = 12/23 (52%)
Frame = -3
Query: 475 GGXPXXKNPGGGXXLPPXGGGPP 407
GG P GGG PP GGG P
Sbjct: 515 GGPPGGGGGGGGGGGPPEGGGDP 537
>M69057-3|AAA28558.1| 595|Drosophila melanogaster GABA-alpha
receptor protein.
Length = 595
Score = 28.7 bits (61), Expect = 10.0
Identities = 12/23 (52%), Positives = 12/23 (52%)
Frame = -3
Query: 475 GGXPXXKNPGGGXXLPPXGGGPP 407
GG P GGG PP GGG P
Sbjct: 504 GGPPGGGGGGGGGGGPPEGGGDP 526
>M69057-2|AAA28557.1| 601|Drosophila melanogaster GABA-alpha
receptor protein.
Length = 601
Score = 28.7 bits (61), Expect = 10.0
Identities = 12/23 (52%), Positives = 12/23 (52%)
Frame = -3
Query: 475 GGXPXXKNPGGGXXLPPXGGGPP 407
GG P GGG PP GGG P
Sbjct: 510 GGPPGGGGGGGGGGGPPEGGGDP 532
>M69057-1|AAA28556.1| 606|Drosophila melanogaster GABA-alpha
receptor protein.
Length = 606
Score = 28.7 bits (61), Expect = 10.0
Identities = 12/23 (52%), Positives = 12/23 (52%)
Frame = -3
Query: 475 GGXPXXKNPGGGXXLPPXGGGPP 407
GG P GGG PP GGG P
Sbjct: 515 GGPPGGGGGGGGGGGPPEGGGDP 537
>AE014296-1598|AAN11989.1| 585|Drosophila melanogaster CG10537-PB,
isoform B protein.
Length = 585
Score = 28.7 bits (61), Expect = 10.0
Identities = 12/23 (52%), Positives = 12/23 (52%)
Frame = -3
Query: 475 GGXPXXKNPGGGXXLPPXGGGPP 407
GG P GGG PP GGG P
Sbjct: 494 GGPPGGGGGGGGGGGPPEGGGDP 516
>AE014296-1597|AAF50311.1| 606|Drosophila melanogaster CG10537-PA,
isoform A protein.
Length = 606
Score = 28.7 bits (61), Expect = 10.0
Identities = 12/23 (52%), Positives = 12/23 (52%)
Frame = -3
Query: 475 GGXPXXKNPGGGXXLPPXGGGPP 407
GG P GGG PP GGG P
Sbjct: 515 GGPPGGGGGGGGGGGPPEGGGDP 537
>AE014296-1596|AAN11988.1| 606|Drosophila melanogaster CG10537-PC,
isoform C protein.
Length = 606
Score = 28.7 bits (61), Expect = 10.0
Identities = 12/23 (52%), Positives = 12/23 (52%)
Frame = -3
Query: 475 GGXPXXKNPGGGXXLPPXGGGPP 407
GG P GGG PP GGG P
Sbjct: 515 GGPPGGGGGGGGGGGPPEGGGDP 537
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,554,051
Number of Sequences: 53049
Number of extensions: 420542
Number of successful extensions: 1850
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 731
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1679
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 3818998872
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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