Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP11_FL5_L22
(907 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
X52846-1|CAA37037.1| 575|Drosophila melanogaster protein ( Dros... 31 1.6
BT015209-1|AAT94438.1| 575|Drosophila melanogaster RE56857p pro... 31 1.6
BT011476-1|AAR99134.1| 719|Drosophila melanogaster RE11923p pro... 31 1.6
BT001716-1|AAN71471.1| 578|Drosophila melanogaster RE68337p pro... 31 1.6
AE014297-394|AAG22212.1| 578|Drosophila melanogaster CG10279-PF... 31 1.6
AE014297-393|AAN14332.1| 578|Drosophila melanogaster CG10279-PC... 31 1.6
AE014297-392|AAF51926.2| 578|Drosophila melanogaster CG10279-PB... 31 1.6
AE014297-391|AAF51927.2| 578|Drosophila melanogaster CG10279-PE... 31 1.6
AE014297-390|AAN14331.1| 575|Drosophila melanogaster CG10279-PD... 31 1.6
AE014297-389|AAG22213.2| 719|Drosophila melanogaster CG10279-PA... 31 1.6
AE014297-1700|AAN13569.1| 112|Drosophila melanogaster CG9759-PB... 29 6.6
AE014297-1699|AAF54958.1| 112|Drosophila melanogaster CG9759-PA... 29 6.6
>X52846-1|CAA37037.1| 575|Drosophila melanogaster protein (
Drosophila melanogasterRM62 mRNA for novel RNA helicase.
).
Length = 575
Score = 31.5 bits (68), Expect = 1.6
Identities = 14/24 (58%), Positives = 14/24 (58%)
Frame = +1
Query: 37 GGGXXXPPGGGGGXXLFXGGGXKK 108
GGG GGGGG F GGG KK
Sbjct: 527 GGGGPSRYGGGGGGGRFGGGGFKK 550
>BT015209-1|AAT94438.1| 575|Drosophila melanogaster RE56857p
protein.
Length = 575
Score = 31.5 bits (68), Expect = 1.6
Identities = 14/24 (58%), Positives = 14/24 (58%)
Frame = +1
Query: 37 GGGXXXPPGGGGGXXLFXGGGXKK 108
GGG GGGGG F GGG KK
Sbjct: 527 GGGGRSRYGGGGGGGRFGGGGFKK 550
>BT011476-1|AAR99134.1| 719|Drosophila melanogaster RE11923p
protein.
Length = 719
Score = 31.5 bits (68), Expect = 1.6
Identities = 14/24 (58%), Positives = 14/24 (58%)
Frame = +1
Query: 37 GGGXXXPPGGGGGXXLFXGGGXKK 108
GGG GGGGG F GGG KK
Sbjct: 671 GGGGRSRYGGGGGGGRFGGGGFKK 694
>BT001716-1|AAN71471.1| 578|Drosophila melanogaster RE68337p
protein.
Length = 578
Score = 31.5 bits (68), Expect = 1.6
Identities = 14/24 (58%), Positives = 14/24 (58%)
Frame = +1
Query: 37 GGGXXXPPGGGGGXXLFXGGGXKK 108
GGG GGGGG F GGG KK
Sbjct: 530 GGGGRSRYGGGGGGGRFGGGGFKK 553
>AE014297-394|AAG22212.1| 578|Drosophila melanogaster CG10279-PF,
isoform F protein.
Length = 578
Score = 31.5 bits (68), Expect = 1.6
Identities = 14/24 (58%), Positives = 14/24 (58%)
Frame = +1
Query: 37 GGGXXXPPGGGGGXXLFXGGGXKK 108
GGG GGGGG F GGG KK
Sbjct: 530 GGGGRSRYGGGGGGGRFGGGGFKK 553
>AE014297-393|AAN14332.1| 578|Drosophila melanogaster CG10279-PC,
isoform C protein.
Length = 578
Score = 31.5 bits (68), Expect = 1.6
Identities = 14/24 (58%), Positives = 14/24 (58%)
Frame = +1
Query: 37 GGGXXXPPGGGGGXXLFXGGGXKK 108
GGG GGGGG F GGG KK
Sbjct: 530 GGGGRSRYGGGGGGGRFGGGGFKK 553
>AE014297-392|AAF51926.2| 578|Drosophila melanogaster CG10279-PB,
isoform B protein.
Length = 578
Score = 31.5 bits (68), Expect = 1.6
Identities = 14/24 (58%), Positives = 14/24 (58%)
Frame = +1
Query: 37 GGGXXXPPGGGGGXXLFXGGGXKK 108
GGG GGGGG F GGG KK
Sbjct: 530 GGGGRSRYGGGGGGGRFGGGGFKK 553
>AE014297-391|AAF51927.2| 578|Drosophila melanogaster CG10279-PE,
isoform E protein.
Length = 578
Score = 31.5 bits (68), Expect = 1.6
Identities = 14/24 (58%), Positives = 14/24 (58%)
Frame = +1
Query: 37 GGGXXXPPGGGGGXXLFXGGGXKK 108
GGG GGGGG F GGG KK
Sbjct: 530 GGGGRSRYGGGGGGGRFGGGGFKK 553
>AE014297-390|AAN14331.1| 575|Drosophila melanogaster CG10279-PD,
isoform D protein.
Length = 575
Score = 31.5 bits (68), Expect = 1.6
Identities = 14/24 (58%), Positives = 14/24 (58%)
Frame = +1
Query: 37 GGGXXXPPGGGGGXXLFXGGGXKK 108
GGG GGGGG F GGG KK
Sbjct: 527 GGGGRSRYGGGGGGGRFGGGGFKK 550
>AE014297-389|AAG22213.2| 719|Drosophila melanogaster CG10279-PA,
isoform A protein.
Length = 719
Score = 31.5 bits (68), Expect = 1.6
Identities = 14/24 (58%), Positives = 14/24 (58%)
Frame = +1
Query: 37 GGGXXXPPGGGGGXXLFXGGGXKK 108
GGG GGGGG F GGG KK
Sbjct: 671 GGGGRSRYGGGGGGGRFGGGGFKK 694
>AE014297-1700|AAN13569.1| 112|Drosophila melanogaster CG9759-PB,
isoform B protein.
Length = 112
Score = 29.5 bits (63), Expect = 6.6
Identities = 12/25 (48%), Positives = 14/25 (56%)
Frame = -1
Query: 421 RXXGGGGKK*XFXXXGXGGXXPPPP 347
R GGG ++ F G GG PPPP
Sbjct: 79 RRGGGGFRRPGFGGGGFGGFYPPPP 103
>AE014297-1699|AAF54958.1| 112|Drosophila melanogaster CG9759-PA,
isoform A protein.
Length = 112
Score = 29.5 bits (63), Expect = 6.6
Identities = 12/25 (48%), Positives = 14/25 (56%)
Frame = -1
Query: 421 RXXGGGGKK*XFXXXGXGGXXPPPP 347
R GGG ++ F G GG PPPP
Sbjct: 79 RRGGGGFRRPGFGGGGFGGFYPPPP 103
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 24,744,420
Number of Sequences: 53049
Number of extensions: 716187
Number of successful extensions: 23590
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 2223
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13443
length of database: 24,988,368
effective HSP length: 85
effective length of database: 20,479,203
effective search space used: 4423507848
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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