Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP11_FL5_L19
         (769 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB204558-1|BAD89803.1| 1143|Apis mellifera nitric oxide synthase...    25   1.0  
AY703685-1|AAU12681.1|  200|Apis mellifera abdominal-A protein.        24   1.4  
DQ485319-1|ABF21078.1|  175|Apis mellifera icarapin variant 2 pr...    24   1.8  
DQ485318-1|ABF21077.1|  223|Apis mellifera icarapin variant 1 pr...    24   1.8  
AY939856-1|AAX33236.1|  223|Apis mellifera venom carbohydrate-ri...    24   1.8  
AY897570-1|AAW81036.1|  223|Apis mellifera venom protein 2 protein.    24   1.8  
AB231585-1|BAE17127.1|  898|Apis mellifera Mahya protein.              23   3.1  
EF117814-1|ABO38437.1|  570|Apis mellifera cryptochrome 2 protein.     22   5.5  
DQ855482-1|ABH88169.1|  116|Apis mellifera chemosensory protein ...    22   7.2  
AJ973399-1|CAJ01446.1|  116|Apis mellifera hypothetical protein ...    22   7.2  

>AB204558-1|BAD89803.1| 1143|Apis mellifera nitric oxide synthase
           protein.
          Length = 1143

 Score = 24.6 bits (51), Expect = 1.0
 Identities = 14/34 (41%), Positives = 16/34 (47%)
 Frame = -2

Query: 759 IHRXANFXSPMIGRADIRRIKKQXRYERLAATSQ 658
           I R   F S + GRA  RRIK    +     TSQ
Sbjct: 449 IARAVKFTSKLFGRALSRRIKATVLFATETGTSQ 482


>AY703685-1|AAU12681.1|  200|Apis mellifera abdominal-A protein.
          Length = 200

 Score = 24.2 bits (50), Expect = 1.4
 Identities = 15/79 (18%), Positives = 34/79 (43%), Gaps = 1/79 (1%)
 Frame = -1

Query: 541 CPFAPREVSVLAELALGHLRYSLTDVPPQSNSPPGSVLEPDHAG-VLNGDERFRHVTTLH 365
           C  +P   S+ + L+   +  +  +   Q NSP  +   P H+G   +     R  ++++
Sbjct: 30  CTTSPATASLESSLSAAAVAAAAVNYAQQHNSPSPTGSSPQHSGSSASTSPAARTTSSMY 89

Query: 364 AWNETPCARRYYRPRTASA 308
            +     A  +++ + A A
Sbjct: 90  PYVSAAAAHHHHQQQQAVA 108


>DQ485319-1|ABF21078.1|  175|Apis mellifera icarapin variant 2
           precursor protein.
          Length = 175

 Score = 23.8 bits (49), Expect = 1.8
 Identities = 8/21 (38%), Positives = 15/21 (71%)
 Frame = +1

Query: 688 TLLFDPSNVGSSYHWRXKIRP 750
           +L F+ S+ GS+++W   +RP
Sbjct: 14  SLSFEDSDEGSNWNWNTLLRP 34


>DQ485318-1|ABF21077.1|  223|Apis mellifera icarapin variant 1
           precursor protein.
          Length = 223

 Score = 23.8 bits (49), Expect = 1.8
 Identities = 8/21 (38%), Positives = 15/21 (71%)
 Frame = +1

Query: 688 TLLFDPSNVGSSYHWRXKIRP 750
           +L F+ S+ GS+++W   +RP
Sbjct: 58  SLSFEDSDEGSNWNWNTLLRP 78


>AY939856-1|AAX33236.1|  223|Apis mellifera venom carbohydrate-rich
           protein precursor protein.
          Length = 223

 Score = 23.8 bits (49), Expect = 1.8
 Identities = 8/21 (38%), Positives = 15/21 (71%)
 Frame = +1

Query: 688 TLLFDPSNVGSSYHWRXKIRP 750
           +L F+ S+ GS+++W   +RP
Sbjct: 58  SLSFEDSDEGSNWNWNTLLRP 78


>AY897570-1|AAW81036.1|  223|Apis mellifera venom protein 2 protein.
          Length = 223

 Score = 23.8 bits (49), Expect = 1.8
 Identities = 8/21 (38%), Positives = 15/21 (71%)
 Frame = +1

Query: 688 TLLFDPSNVGSSYHWRXKIRP 750
           +L F+ S+ GS+++W   +RP
Sbjct: 58  SLSFEDSDEGSNWNWNTLLRP 78


>AB231585-1|BAE17127.1|  898|Apis mellifera Mahya protein.
          Length = 898

 Score = 23.0 bits (47), Expect = 3.1
 Identities = 9/26 (34%), Positives = 15/26 (57%)
 Frame = +1

Query: 7   ARVNGGSNYDSLKVAKCLXHLISDAH 84
           A  + GS+    ++ +CL H I +AH
Sbjct: 134 AACHSGSSLTKSRLMRCLHHDIENAH 159


>EF117814-1|ABO38437.1|  570|Apis mellifera cryptochrome 2 protein.
          Length = 570

 Score = 22.2 bits (45), Expect = 5.5
 Identities = 8/19 (42%), Positives = 10/19 (52%)
 Frame = +1

Query: 259 SSLKNHYFHCFITYSVGRK 315
           SS    +FHC+     GRK
Sbjct: 420 SSFFQQFFHCYCPVRFGRK 438


>DQ855482-1|ABH88169.1|  116|Apis mellifera chemosensory protein 1
           protein.
          Length = 116

 Score = 21.8 bits (44), Expect = 7.2
 Identities = 7/19 (36%), Positives = 11/19 (57%)
 Frame = +1

Query: 238 VGDRFARSSLKNHYFHCFI 294
           + +  A   L+N Y+ CFI
Sbjct: 32  IDEILANDRLRNQYYDCFI 50


>AJ973399-1|CAJ01446.1|  116|Apis mellifera hypothetical protein
           protein.
          Length = 116

 Score = 21.8 bits (44), Expect = 7.2
 Identities = 7/19 (36%), Positives = 11/19 (57%)
 Frame = +1

Query: 238 VGDRFARSSLKNHYFHCFI 294
           + +  A   L+N Y+ CFI
Sbjct: 32  IDEILANDRLRNQYYDCFI 50


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 216,131
Number of Sequences: 438
Number of extensions: 4730
Number of successful extensions: 11
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 24032646
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)