Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP11_FL5_L14
(823 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ026039-1|AAY87898.1| 427|Apis mellifera nicotinic acetylcholi... 33 0.002
DQ667183-1|ABG75735.1| 463|Apis mellifera GABA-gated ion channe... 33 0.004
DQ026033-1|AAY87892.1| 569|Apis mellifera nicotinic acetylcholi... 31 0.010
DQ026032-1|AAY87891.1| 566|Apis mellifera nicotinic acetylcholi... 31 0.013
AY500239-1|AAR92109.1| 555|Apis mellifera neuronal nicotinic ac... 31 0.013
DQ026036-1|AAY87895.1| 529|Apis mellifera nicotinic acetylcholi... 30 0.030
DQ026035-1|AAY87894.1| 529|Apis mellifera nicotinic acetylcholi... 30 0.030
AF514804-1|AAM51823.1| 537|Apis mellifera neuronal nicotinic ac... 30 0.030
EF127800-1|ABL67937.1| 461|Apis mellifera nicotinic acetylcholi... 29 0.039
AY540846-1|AAS48080.1| 541|Apis mellifera neuronal nicotinic ac... 29 0.039
DQ667185-1|ABG75737.1| 447|Apis mellifera glutamate-gated chlor... 29 0.052
DQ026038-1|AAY87897.1| 520|Apis mellifera nicotinic acetylcholi... 29 0.052
DQ026031-1|AAY87890.1| 601|Apis mellifera nicotinic acetylcholi... 29 0.052
DQ667193-1|ABG75745.1| 510|Apis mellifera cys-loop ligand-gated... 29 0.069
DQ026034-1|AAY87893.1| 569|Apis mellifera nicotinic acetylcholi... 29 0.069
AY569781-1|AAS75781.1| 461|Apis mellifera neuronal nicotinic ac... 29 0.069
EF127805-1|ABL67942.1| 461|Apis mellifera nicotinic acetylcholi... 27 0.16
EF127804-1|ABL67941.1| 461|Apis mellifera nicotinic acetylcholi... 27 0.16
EF127803-1|ABL67940.1| 461|Apis mellifera nicotinic acetylcholi... 27 0.16
EF127802-1|ABL67939.1| 461|Apis mellifera nicotinic acetylcholi... 27 0.16
EF127801-1|ABL67938.1| 461|Apis mellifera nicotinic acetylcholi... 27 0.16
DQ026037-1|AAY87896.1| 431|Apis mellifera nicotinic acetylcholi... 27 0.28
DQ667186-1|ABG75738.1| 447|Apis mellifera glutamate-gated chlor... 26 0.37
DQ667182-1|ABG75734.1| 445|Apis mellifera GABA-gated chloride c... 26 0.37
DQ667181-1|ABG75733.1| 445|Apis mellifera GABA-gated chloride c... 26 0.37
AF094822-1|AAC63381.1| 365|Apis mellifera GABA receptor Rdl sub... 26 0.37
DQ011226-1|AAY63895.1| 471|Apis mellifera Rh-like protein protein. 22 7.9
>DQ026039-1|AAY87898.1| 427|Apis mellifera nicotinic acetylcholine
receptor beta2subunit protein.
Length = 427
Score = 33.5 bits (73), Expect = 0.002
Identities = 20/72 (27%), Positives = 34/72 (47%), Gaps = 5/72 (6%)
Frame = +1
Query: 82 CENATSLSLMIDS---LLATYDRESPPDSKIV--VNLTLHLRHANIRESESTVRILADLQ 246
C++ TS S + L YDR+ P+ K ++ L ++H N+ E TV L+
Sbjct: 28 CKDITSTSALYRLKLYLFCDYDRDIIPEQKNATKIDFGLSIQHYNVDEYSHTVDFHVMLK 87
Query: 247 MNWIDKRLSWNA 282
+ W L+W +
Sbjct: 88 LMWEQSHLTWKS 99
>DQ667183-1|ABG75735.1| 463|Apis mellifera GABA-gated ion channel
protein.
Length = 463
Score = 32.7 bits (71), Expect = 0.004
Identities = 19/70 (27%), Positives = 36/70 (51%), Gaps = 4/70 (5%)
Frame = +1
Query: 88 NATSLSLMIDSLLATYDRESPPD---SKIVVNLTLHLRHAN-IRESESTVRILADLQMNW 255
N +++S ++D+LL YD PD V + + +R I E + T + + +W
Sbjct: 2 NHSNISELLDNLLRGYDNSVRPDFGGPPATVEVDIMVRSMGPISEVDMTYSMDCYFRQSW 61
Query: 256 IDKRLSWNAG 285
+D+RL++ G
Sbjct: 62 VDRRLAFQGG 71
Score = 22.6 bits (46), Expect = 4.5
Identities = 8/17 (47%), Positives = 11/17 (64%)
Frame = +3
Query: 465 LDNWPNDMXTCTFKFGS 515
L+N+P D C +FGS
Sbjct: 134 LENFPMDTQRCPLQFGS 150
>DQ026033-1|AAY87892.1| 569|Apis mellifera nicotinic acetylcholine
receptor alpha4subunit protein.
Length = 569
Score = 31.5 bits (68), Expect = 0.010
Identities = 15/39 (38%), Positives = 21/39 (53%), Gaps = 1/39 (2%)
Frame = +2
Query: 311 VSSERLWRPDVVLL-NAAATTAGDYALRARVSNNGSVSW 424
V S+ +WRPD+VL NA A +A + + G V W
Sbjct: 105 VPSDHIWRPDIVLYNNADGNFEVTLATKATIYHQGLVEW 143
Score = 22.2 bits (45), Expect = 6.0
Identities = 10/21 (47%), Positives = 12/21 (57%), Gaps = 2/21 (9%)
Frame = +3
Query: 459 CRLD--NWPNDMXTCTFKFGS 515
C +D +P D TC KFGS
Sbjct: 153 CEIDVEYFPFDEQTCVLKFGS 173
>DQ026032-1|AAY87891.1| 566|Apis mellifera nicotinic acetylcholine
receptor alpha3subunit protein.
Length = 566
Score = 31.1 bits (67), Expect = 0.013
Identities = 15/39 (38%), Positives = 21/39 (53%), Gaps = 1/39 (2%)
Frame = +2
Query: 311 VSSERLWRPDVVLL-NAAATTAGDYALRARVSNNGSVSW 424
V S+ +WRPD+VL NA A +A ++ G V W
Sbjct: 101 VPSDHIWRPDIVLYNNADGNFEVTLATKATLNYTGRVEW 139
Score = 22.2 bits (45), Expect = 6.0
Identities = 10/21 (47%), Positives = 12/21 (57%), Gaps = 2/21 (9%)
Frame = +3
Query: 459 CRLD--NWPNDMXTCTFKFGS 515
C +D +P D TC KFGS
Sbjct: 149 CEIDVEYFPFDEQTCVMKFGS 169
>AY500239-1|AAR92109.1| 555|Apis mellifera neuronal nicotinic
acetylcholine receptoralpha7-1 protein.
Length = 555
Score = 31.1 bits (67), Expect = 0.013
Identities = 14/40 (35%), Positives = 22/40 (55%), Gaps = 1/40 (2%)
Frame = +2
Query: 311 VSSERLWRPDVVLLNAA-ATTAGDYALRARVSNNGSVSWI 427
+ RLW+PDV++ N+A G Y V NNG+ ++
Sbjct: 100 IPPHRLWKPDVLMYNSADEGFDGTYPTNVVVKNNGTCLYV 139
Score = 21.8 bits (44), Expect = 7.9
Identities = 18/83 (21%), Positives = 37/83 (44%), Gaps = 5/83 (6%)
Frame = +1
Query: 61 AIASAAECENATSLSLMIDSLLATYD-RESPPDSK---IVVNLTLHLRHA-NIRESESTV 225
A+A++ + +++ LL TY+ E P ++ +V++ L L ++ E +
Sbjct: 11 ALAASGLVNGGSHEKRLLNDLLDTYNVLERPVGNESEPLVLSFGLTLMQIIDVDEKNQLL 70
Query: 226 RILADLQMNWIDKRLSWNAGGMG 294
L++ W D + WN G
Sbjct: 71 ITNLWLKLEWNDVNMRWNVSDYG 93
>DQ026036-1|AAY87895.1| 529|Apis mellifera nicotinic acetylcholine
receptor alpha6subunit protein.
Length = 529
Score = 29.9 bits (64), Expect = 0.030
Identities = 12/40 (30%), Positives = 24/40 (60%), Gaps = 1/40 (2%)
Frame = +2
Query: 311 VSSERLWRPDVVLLNAA-ATTAGDYALRARVSNNGSVSWI 427
++ +LW+PD+++ N+A G Y V++NGS ++
Sbjct: 131 ITPNKLWKPDILMYNSADEGFDGTYQTNVVVTHNGSCLYV 170
Score = 24.6 bits (51), Expect = 1.1
Identities = 15/67 (22%), Positives = 30/67 (44%), Gaps = 5/67 (7%)
Frame = +1
Query: 109 MIDSLLATYDRESPP----DSKIVVNLTLHLRHA-NIRESESTVRILADLQMNWIDKRLS 273
+++ LL++Y+ P + V + L+ ++ E + A L++ W+D L
Sbjct: 58 LLNELLSSYNTLERPVANESEPLEVKFGITLQQIIDVDEKNQILTTNAWLKLEWVDYNLQ 117
Query: 274 WNAGGMG 294
WN G
Sbjct: 118 WNESEYG 124
>DQ026035-1|AAY87894.1| 529|Apis mellifera nicotinic acetylcholine
receptor alpha6subunit protein.
Length = 529
Score = 29.9 bits (64), Expect = 0.030
Identities = 12/40 (30%), Positives = 24/40 (60%), Gaps = 1/40 (2%)
Frame = +2
Query: 311 VSSERLWRPDVVLLNAA-ATTAGDYALRARVSNNGSVSWI 427
++ +LW+PD+++ N+A G Y V++NGS ++
Sbjct: 131 ITPNKLWKPDILMYNSADEGFDGTYQTNVVVTHNGSCLYV 170
Score = 24.6 bits (51), Expect = 1.1
Identities = 15/67 (22%), Positives = 30/67 (44%), Gaps = 5/67 (7%)
Frame = +1
Query: 109 MIDSLLATYDRESPP----DSKIVVNLTLHLRHA-NIRESESTVRILADLQMNWIDKRLS 273
+++ LL++Y+ P + V + L+ ++ E + A L++ W+D L
Sbjct: 58 LLNELLSSYNTLERPVANESEPLEVKFGITLQQIIDVDEKNQILTTNAWLKLEWVDYNLQ 117
Query: 274 WNAGGMG 294
WN G
Sbjct: 118 WNESEYG 124
>AF514804-1|AAM51823.1| 537|Apis mellifera neuronal nicotinic
acetylcholine receptoralpha-3 protein.
Length = 537
Score = 29.9 bits (64), Expect = 0.030
Identities = 18/48 (37%), Positives = 24/48 (50%), Gaps = 4/48 (8%)
Frame = +2
Query: 293 GYSTWLVSSERLWRPDVVLLNAAATTAGDYAL----RARVSNNGSVSW 424
G V SE +W PD+VL N A G+Y + +A + G VSW
Sbjct: 104 GVEMLYVPSENIWLPDIVLYNNA---DGNYEVTLMTKATLKYTGDVSW 148
>EF127800-1|ABL67937.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 1 protein.
Length = 461
Score = 29.5 bits (63), Expect = 0.039
Identities = 12/40 (30%), Positives = 24/40 (60%), Gaps = 1/40 (2%)
Frame = +2
Query: 311 VSSERLWRPDVVLLNAA-ATTAGDYALRARVSNNGSVSWI 427
++ +LW+PD+++ N+A G Y V++NGS ++
Sbjct: 63 ITPNKLWKPDILMYNSADEGFDGTYQTSVVVTHNGSCLYV 102
Score = 24.2 bits (50), Expect = 1.5
Identities = 9/32 (28%), Positives = 15/32 (46%)
Frame = +1
Query: 199 NIRESESTVRILADLQMNWIDKRLSWNAGGMG 294
++ E + A L++ W+D L WN G
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYG 56
>AY540846-1|AAS48080.1| 541|Apis mellifera neuronal nicotinic
acetylcholine receptorApisa2 subunit protein.
Length = 541
Score = 29.5 bits (63), Expect = 0.039
Identities = 21/63 (33%), Positives = 29/63 (46%), Gaps = 2/63 (3%)
Frame = +2
Query: 287 EWGYSTWL-VSSERLWRPDVVLLNAAATTAGDYAL-RARVSNNGSVSWIKRLDISTPISM 460
E+G T L V SE +W PD+VL N A G + +A + G V W + +
Sbjct: 88 EYGGVTELYVPSEHIWLPDIVLYNNADGEYGVTTMTKAILHYTGKVLWTPPAIFKSSCEI 147
Query: 461 QVR 469
VR
Sbjct: 148 DVR 150
Score = 22.2 bits (45), Expect = 6.0
Identities = 10/21 (47%), Positives = 12/21 (57%), Gaps = 2/21 (9%)
Frame = +3
Query: 459 CRLD--NWPNDMXTCTFKFGS 515
C +D +P D TC KFGS
Sbjct: 145 CEIDVRYFPFDQQTCFMKFGS 165
>DQ667185-1|ABG75737.1| 447|Apis mellifera glutamate-gated chloride
channel protein.
Length = 447
Score = 29.1 bits (62), Expect = 0.052
Identities = 19/73 (26%), Positives = 36/73 (49%), Gaps = 7/73 (9%)
Frame = +1
Query: 109 MIDSLLATYDR------ESPPDSKIVVNLTLHLRH-ANIRESESTVRILADLQMNWIDKR 267
++D++L YD E+ D +V + L +R A I + + + + W+D+R
Sbjct: 35 VLDNILGGYDARIRPSGENATDGPAIVRVNLFVRSIATISDIKMEYSVQLTFREQWLDER 94
Query: 268 LSWNAGGMGLQHL 306
L +N G L++L
Sbjct: 95 LRFNDFGGRLKYL 107
>DQ026038-1|AAY87897.1| 520|Apis mellifera nicotinic acetylcholine
receptor beta1subunit protein.
Length = 520
Score = 29.1 bits (62), Expect = 0.052
Identities = 14/40 (35%), Positives = 24/40 (60%), Gaps = 4/40 (10%)
Frame = +2
Query: 320 ERLWRPDVVLLNAAATTAGDYALRAR----VSNNGSVSWI 427
+++W+PD+VL N A G+Y +R + + NG V W+
Sbjct: 106 DKVWKPDIVLFNNA---DGNYEVRYKSNVLIYPNGDVLWV 142
Score = 25.8 bits (54), Expect = 0.48
Identities = 13/30 (43%), Positives = 15/30 (50%), Gaps = 2/30 (6%)
Frame = +3
Query: 450 QFLCRLD--NWPNDMXTCTFKFGSXMXNXD 533
Q C +D +P D TC KFGS N D
Sbjct: 148 QSSCTIDVTYFPFDQQTCIMKFGSWTFNGD 177
Score = 23.8 bits (49), Expect = 2.0
Identities = 15/53 (28%), Positives = 26/53 (49%), Gaps = 4/53 (7%)
Frame = +1
Query: 160 KIVVNLTL-HLRHANIRESESTVRILADLQMNWIDKRLSWNA---GGMGLQHL 306
K+ VN L ++ N+ E ++ L+ W D +L W+ GG+G+ L
Sbjct: 51 KVHVNFGLAFVQLINVNEKNQIMKSNVWLRFIWTDYQLQWDEADYGGIGVLRL 103
>DQ026031-1|AAY87890.1| 601|Apis mellifera nicotinic acetylcholine
receptor alpha1subunit protein.
Length = 601
Score = 29.1 bits (62), Expect = 0.052
Identities = 18/48 (37%), Positives = 25/48 (52%), Gaps = 4/48 (8%)
Frame = +2
Query: 293 GYSTWLVSSERLWRPDVVLLNAAATTAGDYAL----RARVSNNGSVSW 424
G T V SE +W PD+VL N A G+Y + +A + + G V W
Sbjct: 91 GVDTLHVPSEHIWLPDIVLYNNA---DGNYEVTIMTKAILHHTGKVVW 135
>DQ667193-1|ABG75745.1| 510|Apis mellifera cys-loop ligand-gated
ion channel subunit protein.
Length = 510
Score = 28.7 bits (61), Expect = 0.069
Identities = 15/53 (28%), Positives = 24/53 (45%), Gaps = 3/53 (5%)
Frame = +2
Query: 320 ERLWRPDVVLLNAAATTAGDYAL---RARVSNNGSVSWIKRLDISTPISMQVR 469
ER+WRPD N + + R+S +G + + RL I M++R
Sbjct: 115 ERIWRPDTYFYNGKHSYVHTITVPNKLLRISQDGDILYSMRLTIKAKCPMELR 167
>DQ026034-1|AAY87893.1| 569|Apis mellifera nicotinic acetylcholine
receptor alpha4subunit protein.
Length = 569
Score = 28.7 bits (61), Expect = 0.069
Identities = 17/42 (40%), Positives = 24/42 (57%), Gaps = 4/42 (9%)
Frame = +2
Query: 311 VSSERLWRPDVVLLNAAATTAGDYAL----RARVSNNGSVSW 424
V S+ +WRPD+VL N A G+Y + +A V +G V W
Sbjct: 105 VPSDHIWRPDIVLYNNA---DGNYEVTLMTKATVYYSGLVVW 143
>AY569781-1|AAS75781.1| 461|Apis mellifera neuronal nicotinic
acetylcholine Apisa7-2 subunit protein.
Length = 461
Score = 28.7 bits (61), Expect = 0.069
Identities = 14/41 (34%), Positives = 19/41 (46%), Gaps = 2/41 (4%)
Frame = +2
Query: 311 VSSERLWRPDVVLLNAAATTAGDYALRAR--VSNNGSVSWI 427
V R+WRPD +L N A + VS+ G V W+
Sbjct: 82 VPYNRVWRPDTILYNNADPQYSSAVINTNVIVSHTGEVVWL 122
>EF127805-1|ABL67942.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 6 protein.
Length = 461
Score = 27.5 bits (58), Expect = 0.16
Identities = 11/40 (27%), Positives = 24/40 (60%), Gaps = 1/40 (2%)
Frame = +2
Query: 311 VSSERLWRPDVVLLNAA-ATTAGDYALRARVSNNGSVSWI 427
++ +LW+PD+++ N+A G Y V+++GS ++
Sbjct: 63 ITPNKLWKPDILMYNSADEGFDGTYQTSVVVTHDGSCLYV 102
Score = 24.2 bits (50), Expect = 1.5
Identities = 9/32 (28%), Positives = 15/32 (46%)
Frame = +1
Query: 199 NIRESESTVRILADLQMNWIDKRLSWNAGGMG 294
++ E + A L++ W+D L WN G
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYG 56
>EF127804-1|ABL67941.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 5 protein.
Length = 461
Score = 27.5 bits (58), Expect = 0.16
Identities = 11/40 (27%), Positives = 24/40 (60%), Gaps = 1/40 (2%)
Frame = +2
Query: 311 VSSERLWRPDVVLLNAA-ATTAGDYALRARVSNNGSVSWI 427
++ +LW+PD+++ N+A G Y V+++GS ++
Sbjct: 63 ITPNKLWKPDILMYNSADEGFDGTYQTSVVVTHDGSCLYV 102
Score = 24.2 bits (50), Expect = 1.5
Identities = 9/32 (28%), Positives = 15/32 (46%)
Frame = +1
Query: 199 NIRESESTVRILADLQMNWIDKRLSWNAGGMG 294
++ E + A L++ W+D L WN G
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYG 56
>EF127803-1|ABL67940.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 4 protein.
Length = 461
Score = 27.5 bits (58), Expect = 0.16
Identities = 11/40 (27%), Positives = 24/40 (60%), Gaps = 1/40 (2%)
Frame = +2
Query: 311 VSSERLWRPDVVLLNAA-ATTAGDYALRARVSNNGSVSWI 427
++ +LW+PD+++ N+A G Y V+++GS ++
Sbjct: 63 ITPNKLWKPDILMYNSADEGFDGTYQTSVVVTHDGSCLYV 102
Score = 24.2 bits (50), Expect = 1.5
Identities = 9/32 (28%), Positives = 15/32 (46%)
Frame = +1
Query: 199 NIRESESTVRILADLQMNWIDKRLSWNAGGMG 294
++ E + A L++ W+D L WN G
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYG 56
>EF127802-1|ABL67939.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 3 protein.
Length = 461
Score = 27.5 bits (58), Expect = 0.16
Identities = 11/40 (27%), Positives = 24/40 (60%), Gaps = 1/40 (2%)
Frame = +2
Query: 311 VSSERLWRPDVVLLNAA-ATTAGDYALRARVSNNGSVSWI 427
++ +LW+PD+++ N+A G Y V+++GS ++
Sbjct: 63 ITPNKLWKPDILMYNSADEGFDGTYQTSVVVTHDGSCLYV 102
Score = 24.2 bits (50), Expect = 1.5
Identities = 9/32 (28%), Positives = 15/32 (46%)
Frame = +1
Query: 199 NIRESESTVRILADLQMNWIDKRLSWNAGGMG 294
++ E + A L++ W+D L WN G
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYG 56
>EF127801-1|ABL67938.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 2 protein.
Length = 461
Score = 27.5 bits (58), Expect = 0.16
Identities = 11/40 (27%), Positives = 24/40 (60%), Gaps = 1/40 (2%)
Frame = +2
Query: 311 VSSERLWRPDVVLLNAA-ATTAGDYALRARVSNNGSVSWI 427
++ +LW+PD+++ N+A G Y V+++GS ++
Sbjct: 63 ITPNKLWKPDILMYNSADEGFDGTYQTSVVVTHDGSCLYV 102
Score = 24.2 bits (50), Expect = 1.5
Identities = 9/32 (28%), Positives = 15/32 (46%)
Frame = +1
Query: 199 NIRESESTVRILADLQMNWIDKRLSWNAGGMG 294
++ E + A L++ W+D L WN G
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYG 56
>DQ026037-1|AAY87896.1| 431|Apis mellifera nicotinic acetylcholine
receptor alpha9subunit protein.
Length = 431
Score = 26.6 bits (56), Expect = 0.28
Identities = 9/29 (31%), Positives = 15/29 (51%)
Frame = +3
Query: 471 NWPNDMXTCTFKFGSXMXNXDXXDFXIDK 557
+WP D C FGS + + + + +DK
Sbjct: 175 SWPYDTHRCRINFGSWVHSGEEVNIFLDK 203
>DQ667186-1|ABG75738.1| 447|Apis mellifera glutamate-gated chloride
channel protein.
Length = 447
Score = 26.2 bits (55), Expect = 0.37
Identities = 18/73 (24%), Positives = 35/73 (47%), Gaps = 7/73 (9%)
Frame = +1
Query: 109 MIDSLLATYDR------ESPPDSKIVVNLTLHLRH-ANIRESESTVRILADLQMNWIDKR 267
++D++L YD E+ D VV + + +R + I + + + W+D+R
Sbjct: 35 VLDNILGGYDARIRPSGENATDGPAVVRVNIFVRSISKIDDVTMEYSVQLTFREQWLDER 94
Query: 268 LSWNAGGMGLQHL 306
L +N G L++L
Sbjct: 95 LRFNDFGGRLKYL 107
>DQ667182-1|ABG75734.1| 445|Apis mellifera GABA-gated chloride
channel protein.
Length = 445
Score = 26.2 bits (55), Expect = 0.37
Identities = 20/81 (24%), Positives = 36/81 (44%), Gaps = 9/81 (11%)
Frame = +2
Query: 293 GYSTWLVSSE---RLWRPDVVLLNAA------ATTAGDYALRARVSNNGSVSWIKRLDIS 445
G T V SE +W PD +N ATT+ ++ R+ ++GS++ RL I+
Sbjct: 79 GVETLSVGSEFIKNIWVPDTFFVNEKQSYFHIATTSNEFI---RIHHSGSITRSIRLTIT 135
Query: 446 TPISMQVRQLAQRHAXLHVQV 508
M ++ H+++
Sbjct: 136 ASCPMNLQYFPMDRQLCHIEI 156
Score = 23.4 bits (48), Expect = 2.6
Identities = 15/67 (22%), Positives = 34/67 (50%), Gaps = 4/67 (5%)
Frame = +1
Query: 88 NATSLSLMIDSLLATYDRESPPD---SKIVVNLTLH-LRHANIRESESTVRILADLQMNW 255
N ++S ++DS +YD+ P+ + V +T++ L +++ E + + + W
Sbjct: 8 NDVNISAILDSFSVSYDKRVRPNYGGPPVEVGVTMYVLSISSLSEVKMDFTLDFYFRQFW 67
Query: 256 IDKRLSW 276
D RL++
Sbjct: 68 TDPRLAF 74
>DQ667181-1|ABG75733.1| 445|Apis mellifera GABA-gated chloride
channel protein.
Length = 445
Score = 26.2 bits (55), Expect = 0.37
Identities = 20/81 (24%), Positives = 36/81 (44%), Gaps = 9/81 (11%)
Frame = +2
Query: 293 GYSTWLVSSE---RLWRPDVVLLNAA------ATTAGDYALRARVSNNGSVSWIKRLDIS 445
G T V SE +W PD +N ATT+ ++ R+ ++GS++ RL I+
Sbjct: 79 GVETLSVGSEFIKNIWVPDTFFVNEKQSYFHIATTSNEFI---RIHHSGSITRSIRLTIT 135
Query: 446 TPISMQVRQLAQRHAXLHVQV 508
M ++ H+++
Sbjct: 136 ASCPMNLQYFPMDRQLCHIEI 156
Score = 22.2 bits (45), Expect = 6.0
Identities = 15/67 (22%), Positives = 33/67 (49%), Gaps = 4/67 (5%)
Frame = +1
Query: 88 NATSLSLMIDSLLATYDRESPPD---SKIVVNLTLH-LRHANIRESESTVRILADLQMNW 255
N ++S ++DS +YD+ P+ + V +T++ L +++ E + + W
Sbjct: 8 NDVNISAILDSFSVSYDKRVRPNYGGPPVEVGVTMYVLSISSVSEVLMDFTLDFYFRQFW 67
Query: 256 IDKRLSW 276
D RL++
Sbjct: 68 TDPRLAF 74
>AF094822-1|AAC63381.1| 365|Apis mellifera GABA receptor Rdl
subunit protein.
Length = 365
Score = 26.2 bits (55), Expect = 0.37
Identities = 20/81 (24%), Positives = 36/81 (44%), Gaps = 9/81 (11%)
Frame = +2
Query: 293 GYSTWLVSSE---RLWRPDVVLLNAA------ATTAGDYALRARVSNNGSVSWIKRLDIS 445
G T V SE +W PD +N ATT+ ++ R+ ++GS++ RL I+
Sbjct: 18 GVETLSVGSEFIKNIWVPDTFFVNEKQSYFHIATTSNEFI---RIHHSGSITRSIRLTIT 74
Query: 446 TPISMQVRQLAQRHAXLHVQV 508
M ++ H+++
Sbjct: 75 ASCPMNLQYFPMDRQLCHIEI 95
>DQ011226-1|AAY63895.1| 471|Apis mellifera Rh-like protein protein.
Length = 471
Score = 21.8 bits (44), Expect = 7.9
Identities = 14/67 (20%), Positives = 31/67 (46%), Gaps = 4/67 (5%)
Frame = +1
Query: 142 ESPPDSKIVVNLTLHLRHANIRESESTVRILADLQMNWIDKRLSWNAGGMGLQHLAGVL- 318
E + ++N L + + + ++ + D + N + + S AGG+ + AG++
Sbjct: 233 EGDDQQRAIINTLLSISASCVIAFATSALVSKDSKFNMVHIQNSTLAGGVAIGTAAGMMC 292
Query: 319 ---GTLV 330
GTL+
Sbjct: 293 QPVGTLI 299
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 195,803
Number of Sequences: 438
Number of extensions: 4527
Number of successful extensions: 55
Number of sequences better than 10.0: 27
Number of HSP's better than 10.0 without gapping: 37
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 55
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 26217432
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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