Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP11_FL5_L08
(832 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ667193-1|ABG75745.1| 510|Apis mellifera cys-loop ligand-gated... 40 2e-05
DQ026038-1|AAY87897.1| 520|Apis mellifera nicotinic acetylcholi... 39 5e-05
DQ026033-1|AAY87892.1| 569|Apis mellifera nicotinic acetylcholi... 38 9e-05
DQ026037-1|AAY87896.1| 431|Apis mellifera nicotinic acetylcholi... 38 1e-04
DQ026032-1|AAY87891.1| 566|Apis mellifera nicotinic acetylcholi... 38 1e-04
AY500239-1|AAR92109.1| 555|Apis mellifera neuronal nicotinic ac... 37 2e-04
DQ667183-1|ABG75735.1| 463|Apis mellifera GABA-gated ion channe... 36 3e-04
DQ026034-1|AAY87893.1| 569|Apis mellifera nicotinic acetylcholi... 36 5e-04
AF514804-1|AAM51823.1| 537|Apis mellifera neuronal nicotinic ac... 36 5e-04
DQ026036-1|AAY87895.1| 529|Apis mellifera nicotinic acetylcholi... 36 6e-04
DQ026035-1|AAY87894.1| 529|Apis mellifera nicotinic acetylcholi... 36 6e-04
AY540846-1|AAS48080.1| 541|Apis mellifera neuronal nicotinic ac... 36 6e-04
EF127800-1|ABL67937.1| 461|Apis mellifera nicotinic acetylcholi... 35 8e-04
EF127801-1|ABL67938.1| 461|Apis mellifera nicotinic acetylcholi... 34 0.001
EF127805-1|ABL67942.1| 461|Apis mellifera nicotinic acetylcholi... 34 0.002
DQ667184-1|ABG75736.1| 489|Apis mellifera GABA-gated ion channe... 34 0.002
DQ026031-1|AAY87890.1| 601|Apis mellifera nicotinic acetylcholi... 34 0.002
DQ026039-1|AAY87898.1| 427|Apis mellifera nicotinic acetylcholi... 33 0.002
EF127803-1|ABL67940.1| 461|Apis mellifera nicotinic acetylcholi... 33 0.003
DQ667182-1|ABG75734.1| 445|Apis mellifera GABA-gated chloride c... 33 0.003
DQ667181-1|ABG75733.1| 445|Apis mellifera GABA-gated chloride c... 33 0.003
AF094822-1|AAC63381.1| 365|Apis mellifera GABA receptor Rdl sub... 33 0.003
EF127804-1|ABL67941.1| 461|Apis mellifera nicotinic acetylcholi... 33 0.004
EF127802-1|ABL67939.1| 461|Apis mellifera nicotinic acetylcholi... 33 0.004
DQ667195-1|ABG75747.1| 469|Apis mellifera cys-loop ligand-gated... 30 0.030
DQ667188-1|ABG75740.1| 383|Apis mellifera histamine-gated chlor... 29 0.040
DQ667186-1|ABG75738.1| 447|Apis mellifera glutamate-gated chlor... 29 0.040
DQ667185-1|ABG75737.1| 447|Apis mellifera glutamate-gated chlor... 29 0.040
AY569781-1|AAS75781.1| 461|Apis mellifera neuronal nicotinic ac... 29 0.040
DQ667194-1|ABG75746.1| 391|Apis mellifera cys-loop ligand-gated... 26 0.37
DQ667187-1|ABG75739.1| 428|Apis mellifera histamine-gated chlor... 26 0.37
DQ667192-1|ABG75744.1| 489|Apis mellifera pH-sensitive chloride... 22 6.0
DQ667191-1|ABG75743.1| 475|Apis mellifera pH-sensitive chloride... 22 6.0
DQ667190-1|ABG75742.1| 509|Apis mellifera pH-sensitive chloride... 22 6.0
DQ667189-1|ABG75741.1| 458|Apis mellifera pH-sensitive chloride... 22 6.0
DQ011226-1|AAY63895.1| 471|Apis mellifera Rh-like protein protein. 22 8.0
>DQ667193-1|ABG75745.1| 510|Apis mellifera cys-loop ligand-gated
ion channel subunit protein.
Length = 510
Score = 40.3 bits (90), Expect = 2e-05
Identities = 21/67 (31%), Positives = 30/67 (44%), Gaps = 3/67 (4%)
Frame = +2
Query: 302 ERLWRPDVVLLNAAATTAGDYALR---ARVSNNGSVSXIKRLDISTPISMQLDNWPNDMQ 472
ER+WRPD N + + R+S +G + RL I M+L N+P D Q
Sbjct: 115 ERIWRPDTYFYNGKHSYVHTITVPNKLLRISQDGDILYSMRLTIKAKCPMELRNFPMDRQ 174
Query: 473 TCTFXFG 493
+C G
Sbjct: 175 SCPLILG 181
>DQ026038-1|AAY87897.1| 520|Apis mellifera nicotinic acetylcholine
receptor beta1subunit protein.
Length = 520
Score = 39.1 bits (87), Expect = 5e-05
Identities = 22/75 (29%), Positives = 37/75 (49%), Gaps = 4/75 (5%)
Frame = +2
Query: 302 ERLWRPDVVLLNAAATTAGDYALRAR----VSNNGSVSXIKRLDISTPISMQLDNWPNDM 469
+++W+PD+VL N A G+Y +R + + NG V + + ++ + +P D
Sbjct: 106 DKVWKPDIVLFNNAD---GNYEVRYKSNVLIYPNGDVLWVPPAIYQSSCTIDVTYFPFDQ 162
Query: 470 QTCTFXFGXRMHNSD 514
QTC FG N D
Sbjct: 163 QTCIMKFGSWTFNGD 177
Score = 23.8 bits (49), Expect = 2.0
Identities = 15/53 (28%), Positives = 26/53 (49%), Gaps = 4/53 (7%)
Frame = +1
Query: 142 KIVVNLTL-HLRHANIRESESTVRILADLQMNWIDKRLSWNA---GGMGLQHL 288
K+ VN L ++ N+ E ++ L+ W D +L W+ GG+G+ L
Sbjct: 51 KVHVNFGLAFVQLINVNEKNQIMKSNVWLRFIWTDYQLQWDEADYGGIGVLRL 103
>DQ026033-1|AAY87892.1| 569|Apis mellifera nicotinic acetylcholine
receptor alpha4subunit protein.
Length = 569
Score = 38.3 bits (85), Expect = 9e-05
Identities = 21/68 (30%), Positives = 32/68 (47%), Gaps = 1/68 (1%)
Frame = +2
Query: 293 VSSERLWRPDVVLL-NAAATTAGDYALRARVSNNGSVSXIKRLDISTPISMQLDNWPNDM 469
V S+ +WRPD+VL NA A +A + + G V + + ++ +P D
Sbjct: 105 VPSDHIWRPDIVLYNNADGNFEVTLATKATIYHQGLVEWKPPAIYKSSCEIDVEYFPFDE 164
Query: 470 QTCTFXFG 493
QTC FG
Sbjct: 165 QTCVLKFG 172
>DQ026037-1|AAY87896.1| 431|Apis mellifera nicotinic acetylcholine
receptor alpha9subunit protein.
Length = 431
Score = 37.9 bits (84), Expect = 1e-04
Identities = 20/77 (25%), Positives = 34/77 (44%), Gaps = 3/77 (3%)
Frame = +2
Query: 293 VSSERLWRPDVVLLNAAATT---AGDYALRARVSNNGSVSXIKRLDISTPISMQLDNWPN 463
V S+ +W PD+ + N+ T G V ++GSVS + + + +WP
Sbjct: 119 VKSDDIWVPDISVYNSGDMTFDQTGIPPTTCLVFSSGSVSCVPSVKHVAKCATDFSSWPY 178
Query: 464 DMQTCTFXFGXRMHNSD 514
D C FG +H+ +
Sbjct: 179 DTHRCRINFGSWVHSGE 195
>DQ026032-1|AAY87891.1| 566|Apis mellifera nicotinic acetylcholine
receptor alpha3subunit protein.
Length = 566
Score = 37.9 bits (84), Expect = 1e-04
Identities = 21/68 (30%), Positives = 32/68 (47%), Gaps = 1/68 (1%)
Frame = +2
Query: 293 VSSERLWRPDVVLL-NAAATTAGDYALRARVSNNGSVSXIKRLDISTPISMQLDNWPNDM 469
V S+ +WRPD+VL NA A +A ++ G V + + ++ +P D
Sbjct: 101 VPSDHIWRPDIVLYNNADGNFEVTLATKATLNYTGRVEWKPPAIYKSSCEIDVEYFPFDE 160
Query: 470 QTCTFXFG 493
QTC FG
Sbjct: 161 QTCVMKFG 168
>AY500239-1|AAR92109.1| 555|Apis mellifera neuronal nicotinic
acetylcholine receptoralpha7-1 protein.
Length = 555
Score = 37.1 bits (82), Expect = 2e-04
Identities = 20/68 (29%), Positives = 31/68 (45%), Gaps = 1/68 (1%)
Frame = +2
Query: 293 VSSERLWRPDVVLLNAA-ATTAGDYALRARVSNNGSVSXIKRLDISTPISMQLDNWPNDM 469
+ RLW+PDV++ N+A G Y V NNG+ + + + + +P D
Sbjct: 100 IPPHRLWKPDVLMYNSADEGFDGTYPTNVVVKNNGTCLYVPPGIFKSTCKIDITWFPFDD 159
Query: 470 QTCTFXFG 493
Q C FG
Sbjct: 160 QRCEMKFG 167
>DQ667183-1|ABG75735.1| 463|Apis mellifera GABA-gated ion channel
protein.
Length = 463
Score = 36.3 bits (80), Expect = 3e-04
Identities = 21/66 (31%), Positives = 28/66 (42%), Gaps = 3/66 (4%)
Frame = +2
Query: 305 RLWRPDVVLLNAAAT---TAGDYALRARVSNNGSVSXIKRLDISTPISMQLDNWPNDMQT 475
R+W+PD N + T R+ +G V RL I M L+N+P D Q
Sbjct: 84 RIWKPDTYFYNGKHSYLHTITSPNKFVRLYQDGRVLYSSRLTIKAGCPMNLENFPMDTQR 143
Query: 476 CTFXFG 493
C FG
Sbjct: 144 CPLQFG 149
Score = 32.7 bits (71), Expect = 0.004
Identities = 19/70 (27%), Positives = 36/70 (51%), Gaps = 4/70 (5%)
Frame = +1
Query: 70 NATSLSLMIDSLLATYDRESPPD---SKIVVNLTLHLRHAN-IRESESTVRILADLQMNW 237
N +++S ++D+LL YD PD V + + +R I E + T + + +W
Sbjct: 2 NHSNISELLDNLLRGYDNSVRPDFGGPPATVEVDIMVRSMGPISEVDMTYSMDCYFRQSW 61
Query: 238 IDKRLSWNAG 267
+D+RL++ G
Sbjct: 62 VDRRLAFQGG 71
>DQ026034-1|AAY87893.1| 569|Apis mellifera nicotinic acetylcholine
receptor alpha4subunit protein.
Length = 569
Score = 35.9 bits (79), Expect = 5e-04
Identities = 23/71 (32%), Positives = 36/71 (50%), Gaps = 4/71 (5%)
Frame = +2
Query: 293 VSSERLWRPDVVLLNAAATTAGDYAL----RARVSNNGSVSXIKRLDISTPISMQLDNWP 460
V S+ +WRPD+VL N A G+Y + +A V +G V + S+ ++ +P
Sbjct: 105 VPSDHIWRPDIVLYNNA---DGNYEVTLMTKATVYYSGLVVWQPPAVYKSSCSIDVEFFP 161
Query: 461 NDMQTCTFXFG 493
D+QTC G
Sbjct: 162 YDVQTCVLKLG 172
>AF514804-1|AAM51823.1| 537|Apis mellifera neuronal nicotinic
acetylcholine receptoralpha-3 protein.
Length = 537
Score = 35.9 bits (79), Expect = 5e-04
Identities = 24/82 (29%), Positives = 37/82 (45%), Gaps = 4/82 (4%)
Frame = +2
Query: 275 GCSTWLVSSERLWRPDVVLLNAAATTAGDYAL----RARVSNNGSVSXIKRLDISTPISM 442
G V SE +W PD+VL N A G+Y + +A + G VS + +
Sbjct: 104 GVEMLYVPSENIWLPDIVLYNNA---DGNYEVTLMTKATLKYTGDVSWKPPAIYKSSCEI 160
Query: 443 QLDNWPNDMQTCTFXFGXRMHN 508
++ +P D Q+C FG +N
Sbjct: 161 NVEYFPFDEQSCIMKFGSWTYN 182
>DQ026036-1|AAY87895.1| 529|Apis mellifera nicotinic acetylcholine
receptor alpha6subunit protein.
Length = 529
Score = 35.5 bits (78), Expect = 6e-04
Identities = 18/68 (26%), Positives = 33/68 (48%), Gaps = 1/68 (1%)
Frame = +2
Query: 293 VSSERLWRPDVVLLNAA-ATTAGDYALRARVSNNGSVSXIKRLDISTPISMQLDNWPNDM 469
++ +LW+PD+++ N+A G Y V++NGS + + + + +P D
Sbjct: 131 ITPNKLWKPDILMYNSADEGFDGTYQTNVVVTHNGSCLYVPPGIFKSTCKIDITWFPFDD 190
Query: 470 QTCTFXFG 493
Q C FG
Sbjct: 191 QHCDMKFG 198
Score = 24.6 bits (51), Expect = 1.1
Identities = 15/67 (22%), Positives = 30/67 (44%), Gaps = 5/67 (7%)
Frame = +1
Query: 91 MIDSLLATYDRESPP----DSKIVVNLTLHLRHA-NIRESESTVRILADLQMNWIDKRLS 255
+++ LL++Y+ P + V + L+ ++ E + A L++ W+D L
Sbjct: 58 LLNELLSSYNTLERPVANESEPLEVKFGITLQQIIDVDEKNQILTTNAWLKLEWVDYNLQ 117
Query: 256 WNAGGMG 276
WN G
Sbjct: 118 WNESEYG 124
>DQ026035-1|AAY87894.1| 529|Apis mellifera nicotinic acetylcholine
receptor alpha6subunit protein.
Length = 529
Score = 35.5 bits (78), Expect = 6e-04
Identities = 18/68 (26%), Positives = 33/68 (48%), Gaps = 1/68 (1%)
Frame = +2
Query: 293 VSSERLWRPDVVLLNAA-ATTAGDYALRARVSNNGSVSXIKRLDISTPISMQLDNWPNDM 469
++ +LW+PD+++ N+A G Y V++NGS + + + + +P D
Sbjct: 131 ITPNKLWKPDILMYNSADEGFDGTYQTNVVVTHNGSCLYVPPGIFKSTCKIDITWFPFDD 190
Query: 470 QTCTFXFG 493
Q C FG
Sbjct: 191 QHCDMKFG 198
Score = 24.6 bits (51), Expect = 1.1
Identities = 15/67 (22%), Positives = 30/67 (44%), Gaps = 5/67 (7%)
Frame = +1
Query: 91 MIDSLLATYDRESPP----DSKIVVNLTLHLRHA-NIRESESTVRILADLQMNWIDKRLS 255
+++ LL++Y+ P + V + L+ ++ E + A L++ W+D L
Sbjct: 58 LLNELLSSYNTLERPVANESEPLEVKFGITLQQIIDVDEKNQILTTNAWLKLEWVDYNLQ 117
Query: 256 WNAGGMG 276
WN G
Sbjct: 118 WNESEYG 124
>AY540846-1|AAS48080.1| 541|Apis mellifera neuronal nicotinic
acetylcholine receptorApisa2 subunit protein.
Length = 541
Score = 35.5 bits (78), Expect = 6e-04
Identities = 25/77 (32%), Positives = 35/77 (45%), Gaps = 2/77 (2%)
Frame = +2
Query: 269 EWGCSTWL-VSSERLWRPDVVLLNAAATTAGDYAL-RARVSNNGSVSXIKRLDISTPISM 442
E+G T L V SE +W PD+VL N A G + +A + G V + +
Sbjct: 88 EYGGVTELYVPSEHIWLPDIVLYNNADGEYGVTTMTKAILHYTGKVLWTPPAIFKSSCEI 147
Query: 443 QLDNWPNDMQTCTFXFG 493
+ +P D QTC FG
Sbjct: 148 DVRYFPFDQQTCFMKFG 164
>EF127800-1|ABL67937.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 1 protein.
Length = 461
Score = 35.1 bits (77), Expect = 8e-04
Identities = 18/68 (26%), Positives = 33/68 (48%), Gaps = 1/68 (1%)
Frame = +2
Query: 293 VSSERLWRPDVVLLNAA-ATTAGDYALRARVSNNGSVSXIKRLDISTPISMQLDNWPNDM 469
++ +LW+PD+++ N+A G Y V++NGS + + + + +P D
Sbjct: 63 ITPNKLWKPDILMYNSADEGFDGTYQTSVVVTHNGSCLYVPPGIFKSTCKIDITWFPFDD 122
Query: 470 QTCTFXFG 493
Q C FG
Sbjct: 123 QHCDMKFG 130
Score = 24.2 bits (50), Expect = 1.5
Identities = 9/32 (28%), Positives = 15/32 (46%)
Frame = +1
Query: 181 NIRESESTVRILADLQMNWIDKRLSWNAGGMG 276
++ E + A L++ W+D L WN G
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYG 56
>EF127801-1|ABL67938.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 2 protein.
Length = 461
Score = 34.3 bits (75), Expect = 0.001
Identities = 18/68 (26%), Positives = 33/68 (48%), Gaps = 1/68 (1%)
Frame = +2
Query: 293 VSSERLWRPDVVLLNAA-ATTAGDYALRARVSNNGSVSXIKRLDISTPISMQLDNWPNDM 469
++ +LW+PD+++ N+A G Y V+++GS + + M + +P D
Sbjct: 63 ITPNKLWKPDILMYNSADEGFDGTYQTSVVVTHDGSCLYVPPGIFKSTCKMDIAWFPFDD 122
Query: 470 QTCTFXFG 493
Q C FG
Sbjct: 123 QHCDMKFG 130
Score = 24.2 bits (50), Expect = 1.5
Identities = 9/32 (28%), Positives = 15/32 (46%)
Frame = +1
Query: 181 NIRESESTVRILADLQMNWIDKRLSWNAGGMG 276
++ E + A L++ W+D L WN G
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYG 56
>EF127805-1|ABL67942.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 6 protein.
Length = 461
Score = 33.9 bits (74), Expect = 0.002
Identities = 18/68 (26%), Positives = 33/68 (48%), Gaps = 1/68 (1%)
Frame = +2
Query: 293 VSSERLWRPDVVLLNAA-ATTAGDYALRARVSNNGSVSXIKRLDISTPISMQLDNWPNDM 469
++ +LW+PD+++ N+A G Y V+++GS + + M + +P D
Sbjct: 63 ITPNKLWKPDILMYNSADEGFDGTYQTSVVVTHDGSCLYVPPGIFKSTCKMDVAWFPFDD 122
Query: 470 QTCTFXFG 493
Q C FG
Sbjct: 123 QHCDMKFG 130
Score = 24.2 bits (50), Expect = 1.5
Identities = 9/32 (28%), Positives = 15/32 (46%)
Frame = +1
Query: 181 NIRESESTVRILADLQMNWIDKRLSWNAGGMG 276
++ E + A L++ W+D L WN G
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYG 56
>DQ667184-1|ABG75736.1| 489|Apis mellifera GABA-gated ion channel
protein.
Length = 489
Score = 33.9 bits (74), Expect = 0.002
Identities = 20/64 (31%), Positives = 29/64 (45%), Gaps = 3/64 (4%)
Frame = +2
Query: 299 SERLWRPDVVLLNAAATTAGDYALR---ARVSNNGSVSXIKRLDISTPISMQLDNWPNDM 469
+E++W PD N + D R R+S +GSV+ R + M L +P D
Sbjct: 113 AEKIWVPDTFFANDKNSFLHDVTERNKLVRLSGDGSVTYGMRFTTTLACMMDLHYYPLDS 172
Query: 470 QTCT 481
Q CT
Sbjct: 173 QNCT 176
>DQ026031-1|AAY87890.1| 601|Apis mellifera nicotinic acetylcholine
receptor alpha1subunit protein.
Length = 601
Score = 33.9 bits (74), Expect = 0.002
Identities = 24/77 (31%), Positives = 36/77 (46%), Gaps = 4/77 (5%)
Frame = +2
Query: 275 GCSTWLVSSERLWRPDVVLLNAAATTAGDYAL----RARVSNNGSVSXIKRLDISTPISM 442
G T V SE +W PD+VL N A G+Y + +A + + G V + +
Sbjct: 91 GVDTLHVPSEHIWLPDIVLYNNA---DGNYEVTIMTKAILHHTGKVVWKPPAIYKSFCEI 147
Query: 443 QLDNWPNDMQTCTFXFG 493
++ +P D QTC FG
Sbjct: 148 DVEYFPFDEQTCFMKFG 164
>DQ026039-1|AAY87898.1| 427|Apis mellifera nicotinic acetylcholine
receptor beta2subunit protein.
Length = 427
Score = 33.5 bits (73), Expect = 0.002
Identities = 20/72 (27%), Positives = 34/72 (47%), Gaps = 5/72 (6%)
Frame = +1
Query: 64 CENATSLSLMIDS---LLATYDRESPPDSKIV--VNLTLHLRHANIRESESTVRILADLQ 228
C++ TS S + L YDR+ P+ K ++ L ++H N+ E TV L+
Sbjct: 28 CKDITSTSALYRLKLYLFCDYDRDIIPEQKNATKIDFGLSIQHYNVDEYSHTVDFHVMLK 87
Query: 229 MNWIDKRLSWNA 264
+ W L+W +
Sbjct: 88 LMWEQSHLTWKS 99
Score = 27.5 bits (58), Expect = 0.16
Identities = 20/79 (25%), Positives = 37/79 (46%), Gaps = 5/79 (6%)
Frame = +2
Query: 293 VSSERLWRPDVVLLNAAATTAGDY---ALRARVSNNGSVSXIKRLDISTPISMQLDN--W 457
V S +W PD+V+ ++ + D ++ V N+G++ + TP+ + D+ W
Sbjct: 110 VKSYEIWVPDIVM-HSVTSVGIDLEMPSVECIVFNSGTILCVP-FTTYTPVC-EYDHTWW 166
Query: 458 PNDMQTCTFXFGXRMHNSD 514
P D+ CT H S+
Sbjct: 167 PYDILNCTIHIASWSHGSN 185
>EF127803-1|ABL67940.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 4 protein.
Length = 461
Score = 33.1 bits (72), Expect = 0.003
Identities = 17/68 (25%), Positives = 33/68 (48%), Gaps = 1/68 (1%)
Frame = +2
Query: 293 VSSERLWRPDVVLLNAA-ATTAGDYALRARVSNNGSVSXIKRLDISTPISMQLDNWPNDM 469
++ +LW+PD+++ N+A G Y V+++GS + + + + +P D
Sbjct: 63 ITPNKLWKPDILMYNSADEGFDGTYQTSVVVTHDGSCLYVPPGIFKSTCKIDITWFPFDD 122
Query: 470 QTCTFXFG 493
Q C FG
Sbjct: 123 QHCDMKFG 130
Score = 24.2 bits (50), Expect = 1.5
Identities = 9/32 (28%), Positives = 15/32 (46%)
Frame = +1
Query: 181 NIRESESTVRILADLQMNWIDKRLSWNAGGMG 276
++ E + A L++ W+D L WN G
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYG 56
>DQ667182-1|ABG75734.1| 445|Apis mellifera GABA-gated chloride
channel protein.
Length = 445
Score = 33.1 bits (72), Expect = 0.003
Identities = 24/77 (31%), Positives = 36/77 (46%), Gaps = 9/77 (11%)
Frame = +2
Query: 275 GCSTWLVSSE---RLWRPDVVLLNAA------ATTAGDYALRARVSNNGSVSXIKRLDIS 427
G T V SE +W PD +N ATT+ ++ R+ ++GS++ RL I+
Sbjct: 79 GVETLSVGSEFIKNIWVPDTFFVNEKQSYFHIATTSNEFI---RIHHSGSITRSIRLTIT 135
Query: 428 TPISMQLDNWPNDMQTC 478
M L +P D Q C
Sbjct: 136 ASCPMNLQYFPMDRQLC 152
Score = 23.4 bits (48), Expect = 2.6
Identities = 15/67 (22%), Positives = 34/67 (50%), Gaps = 4/67 (5%)
Frame = +1
Query: 70 NATSLSLMIDSLLATYDRESPPD---SKIVVNLTLH-LRHANIRESESTVRILADLQMNW 237
N ++S ++DS +YD+ P+ + V +T++ L +++ E + + + W
Sbjct: 8 NDVNISAILDSFSVSYDKRVRPNYGGPPVEVGVTMYVLSISSLSEVKMDFTLDFYFRQFW 67
Query: 238 IDKRLSW 258
D RL++
Sbjct: 68 TDPRLAF 74
>DQ667181-1|ABG75733.1| 445|Apis mellifera GABA-gated chloride
channel protein.
Length = 445
Score = 33.1 bits (72), Expect = 0.003
Identities = 24/77 (31%), Positives = 36/77 (46%), Gaps = 9/77 (11%)
Frame = +2
Query: 275 GCSTWLVSSE---RLWRPDVVLLNAA------ATTAGDYALRARVSNNGSVSXIKRLDIS 427
G T V SE +W PD +N ATT+ ++ R+ ++GS++ RL I+
Sbjct: 79 GVETLSVGSEFIKNIWVPDTFFVNEKQSYFHIATTSNEFI---RIHHSGSITRSIRLTIT 135
Query: 428 TPISMQLDNWPNDMQTC 478
M L +P D Q C
Sbjct: 136 ASCPMNLQYFPMDRQLC 152
Score = 22.2 bits (45), Expect = 6.0
Identities = 15/67 (22%), Positives = 33/67 (49%), Gaps = 4/67 (5%)
Frame = +1
Query: 70 NATSLSLMIDSLLATYDRESPPD---SKIVVNLTLH-LRHANIRESESTVRILADLQMNW 237
N ++S ++DS +YD+ P+ + V +T++ L +++ E + + W
Sbjct: 8 NDVNISAILDSFSVSYDKRVRPNYGGPPVEVGVTMYVLSISSVSEVLMDFTLDFYFRQFW 67
Query: 238 IDKRLSW 258
D RL++
Sbjct: 68 TDPRLAF 74
>AF094822-1|AAC63381.1| 365|Apis mellifera GABA receptor Rdl
subunit protein.
Length = 365
Score = 33.1 bits (72), Expect = 0.003
Identities = 24/77 (31%), Positives = 36/77 (46%), Gaps = 9/77 (11%)
Frame = +2
Query: 275 GCSTWLVSSE---RLWRPDVVLLNAA------ATTAGDYALRARVSNNGSVSXIKRLDIS 427
G T V SE +W PD +N ATT+ ++ R+ ++GS++ RL I+
Sbjct: 18 GVETLSVGSEFIKNIWVPDTFFVNEKQSYFHIATTSNEFI---RIHHSGSITRSIRLTIT 74
Query: 428 TPISMQLDNWPNDMQTC 478
M L +P D Q C
Sbjct: 75 ASCPMNLQYFPMDRQLC 91
>EF127804-1|ABL67941.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 5 protein.
Length = 461
Score = 32.7 bits (71), Expect = 0.004
Identities = 17/68 (25%), Positives = 33/68 (48%), Gaps = 1/68 (1%)
Frame = +2
Query: 293 VSSERLWRPDVVLLNAA-ATTAGDYALRARVSNNGSVSXIKRLDISTPISMQLDNWPNDM 469
++ +LW+PD+++ N+A G Y V+++GS + + + + +P D
Sbjct: 63 ITPNKLWKPDILMYNSADEGFDGTYQTSVVVTHDGSCLYVPPGIFKSTCKIDIAWFPFDD 122
Query: 470 QTCTFXFG 493
Q C FG
Sbjct: 123 QHCDMKFG 130
Score = 24.2 bits (50), Expect = 1.5
Identities = 9/32 (28%), Positives = 15/32 (46%)
Frame = +1
Query: 181 NIRESESTVRILADLQMNWIDKRLSWNAGGMG 276
++ E + A L++ W+D L WN G
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYG 56
>EF127802-1|ABL67939.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 3 protein.
Length = 461
Score = 32.7 bits (71), Expect = 0.004
Identities = 17/68 (25%), Positives = 33/68 (48%), Gaps = 1/68 (1%)
Frame = +2
Query: 293 VSSERLWRPDVVLLNAA-ATTAGDYALRARVSNNGSVSXIKRLDISTPISMQLDNWPNDM 469
++ +LW+PD+++ N+A G Y V+++GS + + + + +P D
Sbjct: 63 ITPNKLWKPDILMYNSADEGFDGTYQTSVVVTHDGSCLYVPPGIFGSTCKIDIAWFPFDD 122
Query: 470 QTCTFXFG 493
Q C FG
Sbjct: 123 QHCDMKFG 130
Score = 24.2 bits (50), Expect = 1.5
Identities = 9/32 (28%), Positives = 15/32 (46%)
Frame = +1
Query: 181 NIRESESTVRILADLQMNWIDKRLSWNAGGMG 276
++ E + A L++ W+D L WN G
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYG 56
>DQ667195-1|ABG75747.1| 469|Apis mellifera cys-loop ligand-gated
ion channel subunit protein.
Length = 469
Score = 29.9 bits (64), Expect = 0.030
Identities = 18/70 (25%), Positives = 32/70 (45%), Gaps = 3/70 (4%)
Frame = +2
Query: 308 LWRPDVVLLN--AAATTAGDYA-LRARVSNNGSVSXIKRLDISTPISMQLDNWPNDMQTC 478
+W P V + N ++A T + + + +G V RL + ++L+ +P D+Q C
Sbjct: 97 IWTPTVYVSNEPSSAITGNNVKDVLVSIDPSGMVRLNTRLQATLNCGLRLEKFPFDVQEC 156
Query: 479 TFXFGXRMHN 508
F HN
Sbjct: 157 PLIFESWTHN 166
>DQ667188-1|ABG75740.1| 383|Apis mellifera histamine-gated chloride
channel protein.
Length = 383
Score = 29.5 bits (63), Expect = 0.040
Identities = 14/71 (19%), Positives = 34/71 (47%), Gaps = 3/71 (4%)
Frame = +2
Query: 308 LWRPDVVLLNAAATTAGDYALRAR---VSNNGSVSXIKRLDISTPISMQLDNWPNDMQTC 478
+WRPD NA T + ++ + ++ ++ + +L + +M+ +++P+D Q C
Sbjct: 87 IWRPDCFFKNAKKVTFHEMSIPNHYLWLYHDKTLLYMSKLTLVLSCAMKFESYPHDTQIC 146
Query: 479 TFXFGXRMHNS 511
+ H +
Sbjct: 147 SMMIESLSHTT 157
>DQ667186-1|ABG75738.1| 447|Apis mellifera glutamate-gated chloride
channel protein.
Length = 447
Score = 29.5 bits (63), Expect = 0.040
Identities = 18/67 (26%), Positives = 29/67 (43%), Gaps = 3/67 (4%)
Frame = +2
Query: 290 LVSSERLWRPDVVLLNAAATTAGDYALR---ARVSNNGSVSXIKRLDISTPISMQLDNWP 460
L + R+W PD+ N + + R+ NGSV R+ ++ M L +P
Sbjct: 109 LTDASRVWMPDLFFSNEKEGHFHNIIMPNVYIRIFPNGSVLYSIRISLTLSCPMNLKLYP 168
Query: 461 NDMQTCT 481
D Q C+
Sbjct: 169 LDRQVCS 175
Score = 26.2 bits (55), Expect = 0.37
Identities = 18/73 (24%), Positives = 35/73 (47%), Gaps = 7/73 (9%)
Frame = +1
Query: 91 MIDSLLATYDR------ESPPDSKIVVNLTLHLRH-ANIRESESTVRILADLQMNWIDKR 249
++D++L YD E+ D VV + + +R + I + + + W+D+R
Sbjct: 35 VLDNILGGYDARIRPSGENATDGPAVVRVNIFVRSISKIDDVTMEYSVQLTFREQWLDER 94
Query: 250 LSWNAGGMGLQHL 288
L +N G L++L
Sbjct: 95 LRFNDFGGRLKYL 107
>DQ667185-1|ABG75737.1| 447|Apis mellifera glutamate-gated chloride
channel protein.
Length = 447
Score = 29.5 bits (63), Expect = 0.040
Identities = 18/67 (26%), Positives = 29/67 (43%), Gaps = 3/67 (4%)
Frame = +2
Query: 290 LVSSERLWRPDVVLLNAAATTAGDYALR---ARVSNNGSVSXIKRLDISTPISMQLDNWP 460
L + R+W PD+ N + + R+ NGSV R+ ++ M L +P
Sbjct: 109 LTDASRVWMPDLFFSNEKEGHFHNIIMPNVYIRIFPNGSVLYSIRISLTLSCPMNLKLYP 168
Query: 461 NDMQTCT 481
D Q C+
Sbjct: 169 LDRQVCS 175
Score = 29.1 bits (62), Expect = 0.053
Identities = 19/73 (26%), Positives = 36/73 (49%), Gaps = 7/73 (9%)
Frame = +1
Query: 91 MIDSLLATYDR------ESPPDSKIVVNLTLHLRH-ANIRESESTVRILADLQMNWIDKR 249
++D++L YD E+ D +V + L +R A I + + + + W+D+R
Sbjct: 35 VLDNILGGYDARIRPSGENATDGPAIVRVNLFVRSIATISDIKMEYSVQLTFREQWLDER 94
Query: 250 LSWNAGGMGLQHL 288
L +N G L++L
Sbjct: 95 LRFNDFGGRLKYL 107
>AY569781-1|AAS75781.1| 461|Apis mellifera neuronal nicotinic
acetylcholine Apisa7-2 subunit protein.
Length = 461
Score = 29.5 bits (63), Expect = 0.040
Identities = 17/64 (26%), Positives = 27/64 (42%), Gaps = 2/64 (3%)
Frame = +2
Query: 293 VSSERLWRPDVVLLNAAATTAGDYALRAR--VSNNGSVSXIKRLDISTPISMQLDNWPND 466
V R+WRPD +L N A + VS+ G V + + + ++ +P D
Sbjct: 82 VPYNRVWRPDTILYNNADPQYSSAVINTNVIVSHTGEVVWLSHGIFRSSCDIDVEFFPFD 141
Query: 467 MQTC 478
Q C
Sbjct: 142 EQRC 145
>DQ667194-1|ABG75746.1| 391|Apis mellifera cys-loop ligand-gated
ion channel subunit protein.
Length = 391
Score = 26.2 bits (55), Expect = 0.37
Identities = 18/64 (28%), Positives = 28/64 (43%), Gaps = 5/64 (7%)
Frame = +2
Query: 302 ERLWRPDVVLLNAAATTAGDYALRARVSN-----NGSVSXIKRLDISTPISMQLDNWPND 466
+ LW+PD LNA + AL + S+ N +V R+ M+ +P D
Sbjct: 69 DSLWQPDPYFLNAKVSEIA--ALNHKFSSVTLYRNKTVKYSARMHAIIACQMEFQLYPMD 126
Query: 467 MQTC 478
+Q C
Sbjct: 127 IQIC 130
>DQ667187-1|ABG75739.1| 428|Apis mellifera histamine-gated chloride
channel protein.
Length = 428
Score = 26.2 bits (55), Expect = 0.37
Identities = 15/74 (20%), Positives = 30/74 (40%), Gaps = 3/74 (4%)
Frame = +2
Query: 302 ERLWRPDVVLLNAAATTAGDYALRAR---VSNNGSVSXIKRLDISTPISMQLDNWPNDMQ 472
+ +WRPD NA + T + + + ++ + +L + +M +P+D Q
Sbjct: 116 KNMWRPDSFFKNAKSVTFQTMTIPNHYLWLYKDKTILYMVKLTLKLSCAMNFLIYPHDTQ 175
Query: 473 TCTFXFGXRMHNSD 514
C H +D
Sbjct: 176 ECKLQMESLSHTTD 189
>DQ667192-1|ABG75744.1| 489|Apis mellifera pH-sensitive chloride
channel variant 4 protein.
Length = 489
Score = 22.2 bits (45), Expect = 6.0
Identities = 10/36 (27%), Positives = 19/36 (52%)
Frame = +2
Query: 377 RVSNNGSVSXIKRLDISTPISMQLDNWPNDMQTCTF 484
R+ NG+V+ + R + +L+ +P D C+F
Sbjct: 167 RIYRNGTVNYLMRRHLILSCQGRLNIFPFDDPLCSF 202
>DQ667191-1|ABG75743.1| 475|Apis mellifera pH-sensitive chloride
channel variant 3 protein.
Length = 475
Score = 22.2 bits (45), Expect = 6.0
Identities = 10/36 (27%), Positives = 19/36 (52%)
Frame = +2
Query: 377 RVSNNGSVSXIKRLDISTPISMQLDNWPNDMQTCTF 484
R+ NG+V+ + R + +L+ +P D C+F
Sbjct: 167 RIYRNGTVNYLMRRHLILSCQGRLNIFPFDDPLCSF 202
>DQ667190-1|ABG75742.1| 509|Apis mellifera pH-sensitive chloride
channel variant 1 protein.
Length = 509
Score = 22.2 bits (45), Expect = 6.0
Identities = 10/36 (27%), Positives = 19/36 (52%)
Frame = +2
Query: 377 RVSNNGSVSXIKRLDISTPISMQLDNWPNDMQTCTF 484
R+ NG+V+ + R + +L+ +P D C+F
Sbjct: 218 RIYRNGTVNYLMRRHLILSCQGRLNIFPFDDPLCSF 253
>DQ667189-1|ABG75741.1| 458|Apis mellifera pH-sensitive chloride
channel protein.
Length = 458
Score = 22.2 bits (45), Expect = 6.0
Identities = 10/36 (27%), Positives = 19/36 (52%)
Frame = +2
Query: 377 RVSNNGSVSXIKRLDISTPISMQLDNWPNDMQTCTF 484
R+ NG+V+ + R + +L+ +P D C+F
Sbjct: 167 RIYRNGTVNYLMRRHLILSCQGRLNIFPFDDPLCSF 202
>DQ011226-1|AAY63895.1| 471|Apis mellifera Rh-like protein protein.
Length = 471
Score = 21.8 bits (44), Expect = 8.0
Identities = 14/67 (20%), Positives = 31/67 (46%), Gaps = 4/67 (5%)
Frame = +1
Query: 124 ESPPDSKIVVNLTLHLRHANIRESESTVRILADLQMNWIDKRLSWNAGGMGLQHLAGVL- 300
E + ++N L + + + ++ + D + N + + S AGG+ + AG++
Sbjct: 233 EGDDQQRAIINTLLSISASCVIAFATSALVSKDSKFNMVHIQNSTLAGGVAIGTAAGMMC 292
Query: 301 ---GTLV 312
GTL+
Sbjct: 293 QPVGTLI 299
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 200,795
Number of Sequences: 438
Number of extensions: 4628
Number of successful extensions: 65
Number of sequences better than 10.0: 36
Number of HSP's better than 10.0 without gapping: 38
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 56
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 26581563
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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