Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP11_FL5_L05
(961 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
05_03_0496 + 14706959-14707020,14707173-14707538,14708070-147082... 36 0.063
05_05_0233 + 23496405-23496932,23497346-23497621,23497747-23497938 31 1.4
08_02_0655 + 19738334-19739385,19739501-19739745,19740094-19740119 29 5.5
02_04_0382 - 22501041-22501279,22501717-22501810 29 5.5
09_06_0266 - 21936234-21936282,21936771-21937033 29 7.3
11_04_0350 - 16658497-16659015 28 9.6
10_08_0966 + 21921343-21921354,21923196-21923264,21924165-21924266 28 9.6
02_04_0516 + 23593088-23593116,23593209-23593336,23593527-235937... 28 9.6
>05_03_0496 +
14706959-14707020,14707173-14707538,14708070-14708209,
14708319-14708566,14708814-14708946,14709096-14709159,
14709284-14709380,14709505-14709607,14709702-14709838,
14710063-14710152,14710240-14710401
Length = 533
Score = 35.5 bits (78), Expect = 0.063
Identities = 15/29 (51%), Positives = 15/29 (51%)
Frame = +1
Query: 526 WGGXXXFFFFFFXXKXXXXFFFFFFXXXG 612
W G FFFFFF FFFFFF G
Sbjct: 82 WEGYAFFFFFFFFFFFFFFFFFFFFFFSG 110
>05_05_0233 + 23496405-23496932,23497346-23497621,23497747-23497938
Length = 331
Score = 31.1 bits (67), Expect = 1.4
Identities = 13/25 (52%), Positives = 14/25 (56%)
Frame = +3
Query: 525 LGGXXXFFFFFFXXKXXXXFFFFFF 599
+G FFFFFF FFFFFF
Sbjct: 56 VGSKEDFFFFFFFFFFFFFFFFFFF 80
Score = 30.7 bits (66), Expect = 1.8
Identities = 13/24 (54%), Positives = 13/24 (54%)
Frame = +1
Query: 529 GGXXXFFFFFFXXKXXXXFFFFFF 600
G FFFFFF FFFFFF
Sbjct: 57 GSKEDFFFFFFFFFFFFFFFFFFF 80
Score = 29.5 bits (63), Expect = 4.2
Identities = 12/19 (63%), Positives = 12/19 (63%)
Frame = +3
Query: 543 FFFFFFXXKXXXXFFFFFF 599
FFFFFF FFFFFF
Sbjct: 63 FFFFFFFFFFFFFFFFFFF 81
Score = 29.5 bits (63), Expect = 4.2
Identities = 12/19 (63%), Positives = 12/19 (63%)
Frame = +1
Query: 544 FFFFFFXXKXXXXFFFFFF 600
FFFFFF FFFFFF
Sbjct: 63 FFFFFFFFFFFFFFFFFFF 81
Score = 29.5 bits (63), Expect = 4.2
Identities = 12/19 (63%), Positives = 12/19 (63%)
Frame = +3
Query: 543 FFFFFFXXKXXXXFFFFFF 599
FFFFFF FFFFFF
Sbjct: 64 FFFFFFFFFFFFFFFFFFF 82
Score = 29.5 bits (63), Expect = 4.2
Identities = 12/19 (63%), Positives = 12/19 (63%)
Frame = +1
Query: 544 FFFFFFXXKXXXXFFFFFF 600
FFFFFF FFFFFF
Sbjct: 64 FFFFFFFFFFFFFFFFFFF 82
Score = 29.5 bits (63), Expect = 4.2
Identities = 12/19 (63%), Positives = 12/19 (63%)
Frame = +3
Query: 543 FFFFFFXXKXXXXFFFFFF 599
FFFFFF FFFFFF
Sbjct: 65 FFFFFFFFFFFFFFFFFFF 83
Score = 29.5 bits (63), Expect = 4.2
Identities = 12/19 (63%), Positives = 12/19 (63%)
Frame = +1
Query: 544 FFFFFFXXKXXXXFFFFFF 600
FFFFFF FFFFFF
Sbjct: 65 FFFFFFFFFFFFFFFFFFF 83
Score = 29.5 bits (63), Expect = 4.2
Identities = 12/19 (63%), Positives = 12/19 (63%)
Frame = +3
Query: 543 FFFFFFXXKXXXXFFFFFF 599
FFFFFF FFFFFF
Sbjct: 66 FFFFFFFFFFFFFFFFFFF 84
Score = 29.5 bits (63), Expect = 4.2
Identities = 12/19 (63%), Positives = 12/19 (63%)
Frame = +1
Query: 544 FFFFFFXXKXXXXFFFFFF 600
FFFFFF FFFFFF
Sbjct: 66 FFFFFFFFFFFFFFFFFFF 84
Score = 29.5 bits (63), Expect = 4.2
Identities = 12/19 (63%), Positives = 12/19 (63%)
Frame = +3
Query: 543 FFFFFFXXKXXXXFFFFFF 599
FFFFFF FFFFFF
Sbjct: 67 FFFFFFFFFFFFFFFFFFF 85
Score = 29.5 bits (63), Expect = 4.2
Identities = 12/19 (63%), Positives = 12/19 (63%)
Frame = +1
Query: 544 FFFFFFXXKXXXXFFFFFF 600
FFFFFF FFFFFF
Sbjct: 67 FFFFFFFFFFFFFFFFFFF 85
Score = 29.5 bits (63), Expect = 4.2
Identities = 12/19 (63%), Positives = 12/19 (63%)
Frame = +3
Query: 543 FFFFFFXXKXXXXFFFFFF 599
FFFFFF FFFFFF
Sbjct: 68 FFFFFFFFFFFFFFFFFFF 86
Score = 29.5 bits (63), Expect = 4.2
Identities = 12/19 (63%), Positives = 12/19 (63%)
Frame = +1
Query: 544 FFFFFFXXKXXXXFFFFFF 600
FFFFFF FFFFFF
Sbjct: 68 FFFFFFFFFFFFFFFFFFF 86
>08_02_0655 + 19738334-19739385,19739501-19739745,19740094-19740119
Length = 440
Score = 29.1 bits (62), Expect = 5.5
Identities = 15/28 (53%), Positives = 16/28 (57%)
Frame = -1
Query: 598 KKKKKKXXXFXXKKKKKKKXXXPPKFFF 515
KKKKKK KKKKKKK FF+
Sbjct: 381 KKKKKKKKKKKKKKKKKKKLRFVMIFFY 408
Score = 28.3 bits (60), Expect = 9.6
Identities = 15/28 (53%), Positives = 15/28 (53%)
Frame = -1
Query: 598 KKKKKKXXXFXXKKKKKKKXXXPPKFFF 515
KKKKKK KKKKKKK K F
Sbjct: 375 KKKKKKKKKKKKKKKKKKKKKKKKKLRF 402
>02_04_0382 - 22501041-22501279,22501717-22501810
Length = 110
Score = 29.1 bits (62), Expect = 5.5
Identities = 9/24 (37%), Positives = 13/24 (54%)
Frame = -3
Query: 458 FFXKKKKXFFXXGGGXXXPPPPPP 387
++ ++ GGG PPPPPP
Sbjct: 80 YYDPPPSPYYGGGGGYGKPPPPPP 103
Score = 28.7 bits (61), Expect = 7.3
Identities = 9/16 (56%), Positives = 11/16 (68%)
Frame = -1
Query: 433 FFXXGGGXXXPPPPPP 386
++ GGG PPPPPP
Sbjct: 88 YYGGGGGYGKPPPPPP 103
>09_06_0266 - 21936234-21936282,21936771-21937033
Length = 103
Score = 28.7 bits (61), Expect = 7.3
Identities = 10/15 (66%), Positives = 10/15 (66%)
Frame = -3
Query: 431 FXXGGGXXXPPPPPP 387
F GGG PPPPPP
Sbjct: 19 FQAGGGRRPPPPPPP 33
Score = 28.7 bits (61), Expect = 7.3
Identities = 10/15 (66%), Positives = 10/15 (66%)
Frame = -1
Query: 430 FXXGGGXXXPPPPPP 386
F GGG PPPPPP
Sbjct: 19 FQAGGGRRPPPPPPP 33
>11_04_0350 - 16658497-16659015
Length = 172
Score = 28.3 bits (60), Expect = 9.6
Identities = 14/24 (58%), Positives = 14/24 (58%)
Frame = -1
Query: 613 PXXXXKKKKKKXXXFXXKKKKKKK 542
P KKKKKK KKKKKKK
Sbjct: 28 PSTEKKKKKKKKKKKKKKKKKKKK 51
>10_08_0966 + 21921343-21921354,21923196-21923264,21924165-21924266
Length = 60
Score = 28.3 bits (60), Expect = 9.6
Identities = 14/24 (58%), Positives = 14/24 (58%)
Frame = -1
Query: 613 PXXXXKKKKKKXXXFXXKKKKKKK 542
P KKKKKK KKKKKKK
Sbjct: 27 PKKKKKKKKKKKKKKKKKKKKKKK 50
>02_04_0516 +
23593088-23593116,23593209-23593336,23593527-23593714,
23593861-23593919,23594997-23595345,23596081-23596333,
23596404-23597476
Length = 692
Score = 28.3 bits (60), Expect = 9.6
Identities = 14/24 (58%), Positives = 14/24 (58%)
Frame = -1
Query: 613 PXXXXKKKKKKXXXFXXKKKKKKK 542
P KKKKKK KKKKKKK
Sbjct: 64 PVVMKKKKKKKKKKKKKKKKKKKK 87
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,641,353
Number of Sequences: 37544
Number of extensions: 236178
Number of successful extensions: 5894
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 1248
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5295
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2776393380
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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