Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP11_FL5_L05
         (961 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AK127997-1|BAC87222.1|  148|Homo sapiens protein ( Homo sapiens ...    36   0.29 

>AK127997-1|BAC87222.1|  148|Homo sapiens protein ( Homo sapiens
           cDNA FLJ46115 fis, clone TESTI2037085. ).
          Length = 148

 Score = 35.5 bits (78), Expect = 0.29
 Identities = 25/67 (37%), Positives = 25/67 (37%)
 Frame = -3

Query: 743 KKKXKKXXXXXXFXXXGKXXXKKKKKKKXXXXXXXXXXXXXXXPPXXXKKKKKKXXXXFX 564
           KKK KK           K   KKKKKKK                    KKKKKK      
Sbjct: 24  KKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKNKKKKKKKKKKKKKKKRK 83

Query: 563 XKKKKKK 543
            KKKKKK
Sbjct: 84  KKKKKKK 90



 Score = 35.5 bits (78), Expect = 0.29
 Identities = 25/67 (37%), Positives = 25/67 (37%)
 Frame = -3

Query: 743 KKKXKKXXXXXXFXXXGKXXXKKKKKKKXXXXXXXXXXXXXXXPPXXXKKKKKKXXXXFX 564
           KKK KK           K   KKKKKKK                    KKKKKK      
Sbjct: 25  KKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKNKKKKKKKKKKKKKKKRKK 84

Query: 563 XKKKKKK 543
            KKKKKK
Sbjct: 85  KKKKKKK 91



 Score = 33.5 bits (73), Expect = 1.2
 Identities = 24/67 (35%), Positives = 24/67 (35%)
 Frame = -3

Query: 743 KKKXKKXXXXXXFXXXGKXXXKKKKKKKXXXXXXXXXXXXXXXPPXXXKKKKKKXXXXFX 564
           KKK KK           K   KKKKKKK                    KKKKKK      
Sbjct: 2   KKKKKKKKKKKKKKRKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKK 61

Query: 563 XKKKKKK 543
            KKK KK
Sbjct: 62  KKKKNKK 68


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 67,513,315
Number of Sequences: 237096
Number of extensions: 886141
Number of successful extensions: 15091
Number of sequences better than 10.0: 1
Number of HSP's better than 10.0 without gapping: 2454
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12699
length of database: 76,859,062
effective HSP length: 90
effective length of database: 55,520,422
effective search space used: 12714176638
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)