Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP11_FL5_K23
(862 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY540846-1|AAS48080.1| 541|Apis mellifera neuronal nicotinic ac... 58 1e-10
DQ667183-1|ABG75735.1| 463|Apis mellifera GABA-gated ion channe... 53 4e-09
DQ026039-1|AAY87898.1| 427|Apis mellifera nicotinic acetylcholi... 52 9e-09
DQ026038-1|AAY87897.1| 520|Apis mellifera nicotinic acetylcholi... 50 3e-08
DQ026031-1|AAY87890.1| 601|Apis mellifera nicotinic acetylcholi... 50 3e-08
DQ026032-1|AAY87891.1| 566|Apis mellifera nicotinic acetylcholi... 47 3e-07
AF514804-1|AAM51823.1| 537|Apis mellifera neuronal nicotinic ac... 46 3e-07
DQ026037-1|AAY87896.1| 431|Apis mellifera nicotinic acetylcholi... 43 3e-06
DQ026033-1|AAY87892.1| 569|Apis mellifera nicotinic acetylcholi... 43 4e-06
DQ026034-1|AAY87893.1| 569|Apis mellifera nicotinic acetylcholi... 42 6e-06
EF127803-1|ABL67940.1| 461|Apis mellifera nicotinic acetylcholi... 42 7e-06
EF127805-1|ABL67942.1| 461|Apis mellifera nicotinic acetylcholi... 42 1e-05
EF127804-1|ABL67941.1| 461|Apis mellifera nicotinic acetylcholi... 42 1e-05
EF127802-1|ABL67939.1| 461|Apis mellifera nicotinic acetylcholi... 42 1e-05
EF127801-1|ABL67938.1| 461|Apis mellifera nicotinic acetylcholi... 42 1e-05
EF127800-1|ABL67937.1| 461|Apis mellifera nicotinic acetylcholi... 42 1e-05
DQ026036-1|AAY87895.1| 529|Apis mellifera nicotinic acetylcholi... 42 1e-05
DQ026035-1|AAY87894.1| 529|Apis mellifera nicotinic acetylcholi... 42 1e-05
AY569781-1|AAS75781.1| 461|Apis mellifera neuronal nicotinic ac... 40 2e-05
DQ667193-1|ABG75745.1| 510|Apis mellifera cys-loop ligand-gated... 39 5e-05
AY500239-1|AAR92109.1| 555|Apis mellifera neuronal nicotinic ac... 39 7e-05
DQ667185-1|ABG75737.1| 447|Apis mellifera glutamate-gated chlor... 34 0.002
DQ667188-1|ABG75740.1| 383|Apis mellifera histamine-gated chlor... 25 0.68
DQ667187-1|ABG75739.1| 428|Apis mellifera histamine-gated chlor... 25 1.2
DQ667195-1|ABG75747.1| 469|Apis mellifera cys-loop ligand-gated... 24 1.6
AB231585-1|BAE17127.1| 898|Apis mellifera Mahya protein. 23 2.7
DQ667194-1|ABG75746.1| 391|Apis mellifera cys-loop ligand-gated... 23 3.6
AB270697-1|BAF75928.1| 735|Apis mellifera FoxP protein protein. 23 4.8
>AY540846-1|AAS48080.1| 541|Apis mellifera neuronal nicotinic
acetylcholine receptorApisa2 subunit protein.
Length = 541
Score = 58.0 bits (134), Expect = 1e-10
Identities = 53/163 (32%), Positives = 69/163 (42%), Gaps = 12/163 (7%)
Frame = +1
Query: 97 IASAAECENATSLSLMIDSLLATYDRDSPPDSK----IVVNLTLHLRHA---NIRESEST 255
I SA C + D LL+ Y+R P S +VV L L L N+++ T
Sbjct: 9 ILSARICHGNPDAKRLYDDLLSNYNRLIRPVSNNNDTVVVKLGLRLSQLIDLNLKDQILT 68
Query: 256 VRIQADLQMNWIDKRLSWNAGEWGCSTWL-VSSERLWRPDAVLLNAAATTAGDYALRXPC 432
+ L+ W D + W+ E+G T L V SE +W PD VL N A G +
Sbjct: 69 TNVW--LEHEWQDHKFQWDPAEYGGVTELYVPSEHIWLPDIVLYNNADGEYGVTTMTKAI 126
Query: 433 I**RLRSPG*SAWTLALQF--LCRLD--NWPNDMQTCTFKFGS 549
L G WT F C +D +P D QTC KFGS
Sbjct: 127 ----LHYTGKVLWTPPAIFKSSCEIDVRYFPFDQQTCFMKFGS 165
>DQ667183-1|ABG75735.1| 463|Apis mellifera GABA-gated ion channel
protein.
Length = 463
Score = 52.8 bits (121), Expect = 4e-09
Identities = 39/151 (25%), Positives = 71/151 (47%), Gaps = 8/151 (5%)
Frame = +1
Query: 121 NATSLSLMIDSLLATYDRDSPPD---SKIVVNLTLHLRHAN-IRESESTVRIQADLQMNW 288
N +++S ++D+LL YD PD V + + +R I E + T + + +W
Sbjct: 2 NHSNISELLDNLLRGYDNSVRPDFGGPPATVEVDIMVRSMGPISEVDMTYSMDCYFRQSW 61
Query: 289 IDKRLSWNAGEWGCSTWLVSSERLWRPDAVLLNAAATTAGDYALRXPCI**RLRSPG*SA 468
+D+RL++ G+ + + R+W+PD N + + + P RL G
Sbjct: 62 VDRRLAFQGGKETLALSISMLARIWKPDTYFYNGKHSYL--HTITSPNKFVRLYQDGRVL 119
Query: 469 WT--LALQFLC--RLDNWPNDMQTCTFKFGS 549
++ L ++ C L+N+P D Q C +FGS
Sbjct: 120 YSSRLTIKAGCPMNLENFPMDTQRCPLQFGS 150
>DQ026039-1|AAY87898.1| 427|Apis mellifera nicotinic acetylcholine
receptor beta2subunit protein.
Length = 427
Score = 51.6 bits (118), Expect = 9e-09
Identities = 43/161 (26%), Positives = 71/161 (44%), Gaps = 10/161 (6%)
Frame = +1
Query: 115 CENATSLSLMIDS---LLATYDRDSPPDSKIV--VNLTLHLRHANIRESESTVRIQADLQ 279
C++ TS S + L YDRD P+ K ++ L ++H N+ E TV L+
Sbjct: 28 CKDITSTSALYRLKLYLFCDYDRDIIPEQKNATKIDFGLSIQHYNVDEYSHTVDFHVMLK 87
Query: 280 MNWIDKRLSWNAGEW-GCSTWLVSSERLWRPDAVLLNAAATTAGDYALRXPCI**RLRSP 456
+ W L+W + E+ ++ V S +W PD V+ + T+ G L P + + +
Sbjct: 88 LMWEQSHLTWKSSEFDSINSIRVKSYEIWVPDIVM--HSVTSVG-IDLEMPSVECIVFNS 144
Query: 457 G*SAWTLALQF--LCRLDN--WPNDMQTCTFKFGSRMHNSD 567
G + +C D+ WP D+ CT S H S+
Sbjct: 145 GTILCVPFTTYTPVCEYDHTWWPYDILNCTIHIASWSHGSN 185
>DQ026038-1|AAY87897.1| 520|Apis mellifera nicotinic acetylcholine
receptor beta1subunit protein.
Length = 520
Score = 50.0 bits (114), Expect = 3e-08
Identities = 38/132 (28%), Positives = 60/132 (45%), Gaps = 6/132 (4%)
Frame = +1
Query: 193 KIVVNLTL-HLRHANIRESESTVRIQADLQMNWIDKRLSWNAGEWG-CSTWLVSSERLWR 366
K+ VN L ++ N+ E ++ L+ W D +L W+ ++G + +++W+
Sbjct: 51 KVHVNFGLAFVQLINVNEKNQIMKSNVWLRFIWTDYQLQWDEADYGGIGVLRLPPDKVWK 110
Query: 367 PDAVLLNAAATTAGDYALRXPCI**RLRSPG*SAWT--LALQFLCRLD--NWPNDMQTCT 534
PD VL N A G+Y +R + G W Q C +D +P D QTC
Sbjct: 111 PDIVLFNNAD---GNYEVRYKSNV-LIYPNGDVLWVPPAIYQSSCTIDVTYFPFDQQTCI 166
Query: 535 FKFGSRMHNSDR 570
KFGS N D+
Sbjct: 167 MKFGSWTFNGDQ 178
>DQ026031-1|AAY87890.1| 601|Apis mellifera nicotinic acetylcholine
receptor alpha1subunit protein.
Length = 601
Score = 50.0 bits (114), Expect = 3e-08
Identities = 45/166 (27%), Positives = 68/166 (40%), Gaps = 12/166 (7%)
Frame = +1
Query: 88 TCAIASAAECENATSLSLMIDSLLATYDRDSPP----DSKIVVNLTLHLRH---ANIRES 246
+C +A + + D LL+ Y+R P ++ V + L L N++
Sbjct: 6 SCLVAPFPGASANSEAKRLYDDLLSNYNRLIRPVGNNSDRLTVKMGLRLSQLIDVNLKNQ 65
Query: 247 ESTVRIQADLQMNWIDKRLSWNAGEWG-CSTWLVSSERLWRPDAVLLNAAATTAGDYALR 423
T + ++ W D +L WN ++G T V SE +W PD VL N A + +
Sbjct: 66 IMTTNVW--VEQEWNDYKLKWNPDDYGGVDTLHVPSEHIWLPDIVLYNNADGNY-EVTIM 122
Query: 424 XPCI**RLRSPG*SAW--TLALQFLCRLD--NWPNDMQTCTFKFGS 549
I L G W + C +D +P D QTC KFGS
Sbjct: 123 TKAI---LHHTGKVVWKPPAIYKSFCEIDVEYFPFDEQTCFMKFGS 165
>DQ026032-1|AAY87891.1| 566|Apis mellifera nicotinic acetylcholine
receptor alpha3subunit protein.
Length = 566
Score = 46.8 bits (106), Expect = 3e-07
Identities = 42/157 (26%), Positives = 67/157 (42%), Gaps = 12/157 (7%)
Frame = +1
Query: 115 CENATSLSLMIDSLLATYDRDSPPDSKIVVNLTLHLR-------HANIRESESTVRIQAD 273
C + D LL+ Y++ P + LT+ ++ N++ T +
Sbjct: 19 CSGNPDAKRLYDDLLSNYNKLVRPVVNVTDALTVKIKLKLSQLIDVNLKNQIMTTNLW-- 76
Query: 274 LQMNWIDKRLSWNAGEWGCSTWL-VSSERLWRPDAVLLNAAATTAGDYALRXPCI**RLR 450
++ +W D +L W+ E+G L V S+ +WRPD VL N A G++ + L
Sbjct: 77 VEQSWYDYKLKWDPKEYGGVEMLHVPSDHIWRPDIVLYNNAD---GNFEVTLATKA-TLN 132
Query: 451 SPG*SAWT--LALQFLCRLD--NWPNDMQTCTFKFGS 549
G W + C +D +P D QTC KFGS
Sbjct: 133 YTGRVEWKPPAIYKSSCEIDVEYFPFDEQTCVMKFGS 169
>AF514804-1|AAM51823.1| 537|Apis mellifera neuronal nicotinic
acetylcholine receptoralpha-3 protein.
Length = 537
Score = 46.4 bits (105), Expect = 3e-07
Identities = 44/152 (28%), Positives = 66/152 (43%), Gaps = 12/152 (7%)
Frame = +1
Query: 142 MIDSLLATYDRDSPPDSKIVVNLTLHLR-------HANIRESESTVRIQADLQMNWIDKR 300
+ D LL+ Y+R P LT+ L N++ T + ++ W D +
Sbjct: 37 LYDDLLSNYNRLIRPVMNNTETLTVQLGLKLSQLIEMNLKNQVMTTNVW--VEQRWNDYK 94
Query: 301 LSWNAGEWGCSTWL-VSSERLWRPDAVLLNAAATTAGDYALRXPCI**RLRSPG*SAW-- 471
L WN E+G L V SE +W PD VL N A G+Y + L+ G +W
Sbjct: 95 LKWNPEEYGGVEMLYVPSENIWLPDIVLYNNA---DGNYEVTL-MTKATLKYTGDVSWKP 150
Query: 472 TLALQFLCRL--DNWPNDMQTCTFKFGSRMHN 561
+ C + + +P D Q+C KFGS +N
Sbjct: 151 PAIYKSSCEINVEYFPFDEQSCIMKFGSWTYN 182
>DQ026037-1|AAY87896.1| 431|Apis mellifera nicotinic acetylcholine
receptor alpha9subunit protein.
Length = 431
Score = 43.2 bits (97), Expect = 3e-06
Identities = 38/160 (23%), Positives = 72/160 (45%), Gaps = 10/160 (6%)
Frame = +1
Query: 118 ENATSLSLMIDSLLATYDRDSPPDS--KIVVNLTLHL--RHANIRESESTVRIQADLQMN 285
++ T+L + L YD + P S +I N+T+ L + + S + + + + +
Sbjct: 39 DHPTTLLKLKRYLFCEYDPNVRPISSHQIANNVTMQLLPKLMEFDDWTSVMELHSWMTLM 98
Query: 286 WIDKRLSWNAGEW-GCSTWLVSSERLWRPDAVLLNAAATTAGDYALRXP-CI**RLRSPG 459
W D LSW ++ G + V S+ +W PD + N+ T + C+ + S G
Sbjct: 99 WTDSHLSWKPSDFDGINYIYVKSDDIWVPDISVYNSGDMTFDQTGIPPTTCL---VFSSG 155
Query: 460 *SAWTLALQFL--CRLD--NWPNDMQTCTFKFGSRMHNSD 567
+ +++ + C D +WP D C FGS +H+ +
Sbjct: 156 SVSCVPSVKHVAKCATDFSSWPYDTHRCRINFGSWVHSGE 195
>DQ026033-1|AAY87892.1| 569|Apis mellifera nicotinic acetylcholine
receptor alpha4subunit protein.
Length = 569
Score = 42.7 bits (96), Expect = 4e-06
Identities = 39/146 (26%), Positives = 67/146 (45%), Gaps = 10/146 (6%)
Frame = +1
Query: 142 MIDSLLATYDRDSPP--DSKIVVNLTLHLRHANIRESESTVRIQAD---LQMNWIDKRLS 306
+ D LL+ Y++ P ++ V+ + + L+ + + + +I ++ +W D +L
Sbjct: 32 LYDDLLSNYNKLVRPVVNTSDVLRVCIKLKLSQLIDVNLKNQIMTTNLWVEQSWYDYKLR 91
Query: 307 WNAGEWGCSTWL-VSSERLWRPDAVLLNAAATTAGDYALRXPCI**RLRSPG*SAW--TL 477
W E+G L V S+ +WRPD VL N A G++ + + G W
Sbjct: 92 WEPKEYGGVKMLHVPSDHIWRPDIVLYNNA---DGNFEVTL-ATKATIYHQGLVEWKPPA 147
Query: 478 ALQFLCRLD--NWPNDMQTCTFKFGS 549
+ C +D +P D QTC KFGS
Sbjct: 148 IYKSSCEIDVEYFPFDEQTCVLKFGS 173
>DQ026034-1|AAY87893.1| 569|Apis mellifera nicotinic acetylcholine
receptor alpha4subunit protein.
Length = 569
Score = 42.3 bits (95), Expect = 6e-06
Identities = 39/146 (26%), Positives = 67/146 (45%), Gaps = 10/146 (6%)
Frame = +1
Query: 142 MIDSLLATYDRDSPP--DSKIVVNLTLHLRHANIRESESTVRIQAD---LQMNWIDKRLS 306
+ D LL+ Y++ P ++ V+ + + L+ + + + +I ++ +W D +L
Sbjct: 32 LYDDLLSNYNKLVRPVVNTSDVLRVCIKLKLSQLIDVNLKNQIMTTNLWVEQSWYDYKLR 91
Query: 307 WNAGEWGCSTWL-VSSERLWRPDAVLLNAAATTAGDYALRXPCI**RLRSPG*SAW--TL 477
W E+G L V S+ +WRPD VL N A G+Y + + G W
Sbjct: 92 WEPKEYGGVKMLHVPSDHIWRPDIVLYNNA---DGNYEVTL-MTKATVYYSGLVVWQPPA 147
Query: 478 ALQFLCRLD--NWPNDMQTCTFKFGS 549
+ C +D +P D+QTC K GS
Sbjct: 148 VYKSSCSIDVEFFPYDVQTCVLKLGS 173
>EF127803-1|ABL67940.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 4 protein.
Length = 461
Score = 41.9 bits (94), Expect = 7e-06
Identities = 29/118 (24%), Positives = 54/118 (45%), Gaps = 5/118 (4%)
Frame = +1
Query: 232 NIRESESTVRIQADLQMNWIDKRLSWNAGEW-GCSTWLVSSERLWRPDAVLLNAAATTAG 408
++ E + A L++ W+D L WN E+ G ++ +LW+PD ++ N +A
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYN-SADEGF 83
Query: 409 DYALRXPCI**RLRSPG*SAWTL--ALQFLCRLD-NW-PNDMQTCTFKFGSRMHNSDR 570
D + + + G + + C++D W P D Q C KFGS ++ ++
Sbjct: 84 DGTYQTSVV---VTHDGSCLYVPPGIFKSTCKIDITWFPFDDQHCDMKFGSWTYDGNQ 138
>EF127805-1|ABL67942.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 6 protein.
Length = 461
Score = 41.5 bits (93), Expect = 1e-05
Identities = 16/55 (29%), Positives = 30/55 (54%), Gaps = 1/55 (1%)
Frame = +1
Query: 232 NIRESESTVRIQADLQMNWIDKRLSWNAGEW-GCSTWLVSSERLWRPDAVLLNAA 393
++ E + A L++ W+D L WN E+ G ++ +LW+PD ++ N+A
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSA 79
>EF127804-1|ABL67941.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 5 protein.
Length = 461
Score = 41.5 bits (93), Expect = 1e-05
Identities = 16/55 (29%), Positives = 30/55 (54%), Gaps = 1/55 (1%)
Frame = +1
Query: 232 NIRESESTVRIQADLQMNWIDKRLSWNAGEW-GCSTWLVSSERLWRPDAVLLNAA 393
++ E + A L++ W+D L WN E+ G ++ +LW+PD ++ N+A
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSA 79
>EF127802-1|ABL67939.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 3 protein.
Length = 461
Score = 41.5 bits (93), Expect = 1e-05
Identities = 16/55 (29%), Positives = 30/55 (54%), Gaps = 1/55 (1%)
Frame = +1
Query: 232 NIRESESTVRIQADLQMNWIDKRLSWNAGEW-GCSTWLVSSERLWRPDAVLLNAA 393
++ E + A L++ W+D L WN E+ G ++ +LW+PD ++ N+A
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSA 79
>EF127801-1|ABL67938.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 2 protein.
Length = 461
Score = 41.5 bits (93), Expect = 1e-05
Identities = 16/55 (29%), Positives = 30/55 (54%), Gaps = 1/55 (1%)
Frame = +1
Query: 232 NIRESESTVRIQADLQMNWIDKRLSWNAGEW-GCSTWLVSSERLWRPDAVLLNAA 393
++ E + A L++ W+D L WN E+ G ++ +LW+PD ++ N+A
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSA 79
>EF127800-1|ABL67937.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 1 protein.
Length = 461
Score = 41.5 bits (93), Expect = 1e-05
Identities = 31/118 (26%), Positives = 55/118 (46%), Gaps = 5/118 (4%)
Frame = +1
Query: 232 NIRESESTVRIQADLQMNWIDKRLSWNAGEWGCSTWL-VSSERLWRPDAVLLNAAATTAG 408
++ E + A L++ W+D L WN E+G L ++ +LW+PD ++ N+A
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSA-DEGF 83
Query: 409 DYALRXPCI**RLRSPG*SAWTLALQF--LCRLD-NW-PNDMQTCTFKFGSRMHNSDR 570
D + + + G + F C++D W P D Q C KFGS ++ ++
Sbjct: 84 DGTYQTSVV---VTHNGSCLYVPPGIFKSTCKIDITWFPFDDQHCDMKFGSWTYDGNQ 138
>DQ026036-1|AAY87895.1| 529|Apis mellifera nicotinic acetylcholine
receptor alpha6subunit protein.
Length = 529
Score = 41.5 bits (93), Expect = 1e-05
Identities = 16/55 (29%), Positives = 30/55 (54%), Gaps = 1/55 (1%)
Frame = +1
Query: 232 NIRESESTVRIQADLQMNWIDKRLSWNAGEW-GCSTWLVSSERLWRPDAVLLNAA 393
++ E + A L++ W+D L WN E+ G ++ +LW+PD ++ N+A
Sbjct: 93 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSA 147
>DQ026035-1|AAY87894.1| 529|Apis mellifera nicotinic acetylcholine
receptor alpha6subunit protein.
Length = 529
Score = 41.5 bits (93), Expect = 1e-05
Identities = 16/55 (29%), Positives = 30/55 (54%), Gaps = 1/55 (1%)
Frame = +1
Query: 232 NIRESESTVRIQADLQMNWIDKRLSWNAGEW-GCSTWLVSSERLWRPDAVLLNAA 393
++ E + A L++ W+D L WN E+ G ++ +LW+PD ++ N+A
Sbjct: 93 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSA 147
>AY569781-1|AAS75781.1| 461|Apis mellifera neuronal nicotinic
acetylcholine Apisa7-2 subunit protein.
Length = 461
Score = 40.3 bits (90), Expect = 2e-05
Identities = 22/67 (32%), Positives = 31/67 (46%), Gaps = 1/67 (1%)
Frame = +1
Query: 196 IVVNLTLHLRHANIRESESTVRIQADLQMNWIDKRLSWNAGEW-GCSTWLVSSERLWRPD 372
+V L+LH ++ E + + W D L WNA E+ G V R+WRPD
Sbjct: 33 VVFGLSLH-HIIDVDEKNQILTTNCWVTQIWTDHHLKWNASEFAGIRVIRVPYNRVWRPD 91
Query: 373 AVLLNAA 393
+L N A
Sbjct: 92 TILYNNA 98
>DQ667193-1|ABG75745.1| 510|Apis mellifera cys-loop ligand-gated
ion channel subunit protein.
Length = 510
Score = 39.1 bits (87), Expect = 5e-05
Identities = 33/149 (22%), Positives = 64/149 (42%), Gaps = 9/149 (6%)
Frame = +1
Query: 130 SLSLMIDSLLATYDRDSPPD----SKIVVNLTLHLRHAN-IRESESTVRIQADLQMNWID 294
++++++++LL Y+ + P + VV + +R + E + + + +W D
Sbjct: 36 NITMVLENLLMNYENNQLPTHGKGTPTVVKTNILIRSMGPVSELDMDYSMDCYFRQSWRD 95
Query: 295 KRLSWNAGEWGCSTWLVSSERLWRPDAVLLNAAATTAGDYALRXPCI**RLRSPG*SAWT 474
RLS+ S + ER+WRPD N + + + P R+ G ++
Sbjct: 96 SRLSFLGPIKSLSLSIKMLERIWRPDTYFYNGKHSYV--HTITVPNKLLRISQDGDILYS 153
Query: 475 LALQFLCR----LDNWPNDMQTCTFKFGS 549
+ L + L N+P D Q+C GS
Sbjct: 154 MRLTIKAKCPMELRNFPMDRQSCPLILGS 182
>AY500239-1|AAR92109.1| 555|Apis mellifera neuronal nicotinic
acetylcholine receptoralpha7-1 protein.
Length = 555
Score = 38.7 bits (86), Expect = 7e-05
Identities = 39/163 (23%), Positives = 70/163 (42%), Gaps = 11/163 (6%)
Frame = +1
Query: 94 AIASAAECENATSLSLMIDSLLATYDRDSPP----DSKIVVNLTLHLRHA-NIRESESTV 258
A+A++ + +++ LL TY+ P +V++ L L ++ E +
Sbjct: 11 ALAASGLVNGGSHEKRLLNDLLDTYNVLERPVGNESEPLVLSFGLTLMQIIDVDEKNQLL 70
Query: 259 RIQADLQMNWIDKRLSWNAGEWGCSTWL-VSSERLWRPDAVLLNAA-ATTAGDYALRXPC 432
L++ W D + WN ++G L + RLW+PD ++ N+A G Y
Sbjct: 71 ITNLWLKLEWNDVNMRWNVSDYGGVRDLRIPPHRLWKPDVLMYNSADEGFDGTYPTNVV- 129
Query: 433 I**RLRSPG*SAWTL--ALQFLCRLD-NW-PNDMQTCTFKFGS 549
+++ G + + C++D W P D Q C KFGS
Sbjct: 130 ----VKNNGTCLYVPPGIFKSTCKIDITWFPFDDQRCEMKFGS 168
>DQ667185-1|ABG75737.1| 447|Apis mellifera glutamate-gated chloride
channel protein.
Length = 447
Score = 33.9 bits (74), Expect = 0.002
Identities = 25/91 (27%), Positives = 41/91 (45%), Gaps = 9/91 (9%)
Frame = +1
Query: 142 MIDSLLATYDRDSPP------DSKIVVNLTLHLRH-ANIRESESTVRIQADLQMNWIDKR 300
++D++L YD P D +V + L +R A I + + +Q + W+D+R
Sbjct: 35 VLDNILGGYDARIRPSGENATDGPAIVRVNLFVRSIATISDIKMEYSVQLTFREQWLDER 94
Query: 301 LSWN--AGEWGCSTWLVSSERLWRPDAVLLN 387
L +N G T L + R+W PD N
Sbjct: 95 LRFNDFGGRLKYLT-LTDASRVWMPDLFFSN 124
>DQ667188-1|ABG75740.1| 383|Apis mellifera histamine-gated chloride
channel protein.
Length = 383
Score = 25.4 bits (53), Expect = 0.68
Identities = 27/115 (23%), Positives = 42/115 (36%), Gaps = 4/115 (3%)
Frame = +1
Query: 232 NIRESESTVRIQADLQMNWIDKRLSW--NAGEWGCSTWLVSSERLWRPDAVLLNAAATTA 405
+I E T L +W D RL N E + +WRPD NA T
Sbjct: 43 SINEESMTYVADIFLAQSWRDSRLRLPENMSEDYRILDVDWLHNIWRPDCFFKNAKKVTF 102
Query: 406 GDYALRXPCI**RLRSP--G*SAWTLALQFLCRLDNWPNDMQTCTFKFGSRMHNS 564
+ ++ + S TL L + +++P+D Q C+ S H +
Sbjct: 103 HEMSIPNHYLWLYHDKTLLYMSKLTLVLSCAMKFESYPHDTQICSMMIESLSHTT 157
>DQ667187-1|ABG75739.1| 428|Apis mellifera histamine-gated chloride
channel protein.
Length = 428
Score = 24.6 bits (51), Expect = 1.2
Identities = 18/79 (22%), Positives = 32/79 (40%), Gaps = 2/79 (2%)
Frame = +1
Query: 352 ERLWRPDAVLLNAAATTAGDYALRXPCI**RLRSPG*SAWTLALQFLCRLD--NWPNDMQ 525
+ +WRPD+ NA + T + + L L+ C ++ +P+D Q
Sbjct: 116 KNMWRPDSFFKNAKSVTFQTMTIPNHYLWLYKDKTILYMVKLTLKLSCAMNFLIYPHDTQ 175
Query: 526 TCTFKFGSRMHNSDRNGFR 582
C + S H +D F+
Sbjct: 176 ECKLQMESLSHTTDEMIFQ 194
>DQ667195-1|ABG75747.1| 469|Apis mellifera cys-loop ligand-gated
ion channel subunit protein.
Length = 469
Score = 24.2 bits (50), Expect = 1.6
Identities = 10/22 (45%), Positives = 13/22 (59%)
Frame = +1
Query: 496 RLDNWPNDMQTCTFKFGSRMHN 561
RL+ +P D+Q C F S HN
Sbjct: 145 RLEKFPFDVQECPLIFESWTHN 166
>AB231585-1|BAE17127.1| 898|Apis mellifera Mahya protein.
Length = 898
Score = 23.4 bits (48), Expect = 2.7
Identities = 10/33 (30%), Positives = 16/33 (48%)
Frame = -3
Query: 557 CILEPNLNVQVCMSLGQLSNLHRNWSANVQALY 459
C L PN + VC+ + + HR A+ +Y
Sbjct: 93 CELSPNSTIAVCVCMRKCPRRHRPVCASNGKIY 125
>DQ667194-1|ABG75746.1| 391|Apis mellifera cys-loop ligand-gated
ion channel subunit protein.
Length = 391
Score = 23.0 bits (47), Expect = 3.6
Identities = 16/71 (22%), Positives = 32/71 (45%), Gaps = 6/71 (8%)
Frame = +1
Query: 196 IVVNLTLHLRHAN-IRESESTVRIQADLQMNWIDKRLS-----WNAGEWGCSTWLVSSER 357
++V+ + + N I + R+ ++ +WI+ RL + G+ + +
Sbjct: 11 VLVDFNIFVADINSINVEDMDFRVDMFVRQSWIESRLDMPDYIFEEGDDYVTLPPEFFDS 70
Query: 358 LWRPDAVLLNA 390
LW+PD LNA
Sbjct: 71 LWQPDPYFLNA 81
>AB270697-1|BAF75928.1| 735|Apis mellifera FoxP protein protein.
Length = 735
Score = 22.6 bits (46), Expect = 4.8
Identities = 8/14 (57%), Positives = 10/14 (71%)
Frame = -2
Query: 339 PSAAAPLPCVPTQS 298
PSA AP+P +P S
Sbjct: 411 PSAGAPMPPIPNMS 424
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 231,417
Number of Sequences: 438
Number of extensions: 5037
Number of successful extensions: 83
Number of sequences better than 10.0: 28
Number of HSP's better than 10.0 without gapping: 42
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 59
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 27795333
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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