Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP11_FL5_K10
         (807 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF625897-1|ABR45904.1|  684|Apis mellifera hexamerin protein.          25   0.83 
EF591128-1|ABQ59246.1|  684|Apis mellifera hexamerin 70a protein.      25   0.83 
AY500239-1|AAR92109.1|  555|Apis mellifera neuronal nicotinic ac...    23   3.3  
AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.             23   3.3  
AY375535-1|AAQ82648.1|  147|Apis mellifera doublesex protein.          22   7.7  
AF388659-1|AAK71995.1|  782|Apis mellifera 1D-myo-inositol-trisp...    22   7.7  

>EF625897-1|ABR45904.1|  684|Apis mellifera hexamerin protein.
          Length = 684

 Score = 25.0 bits (52), Expect = 0.83
 Identities = 15/42 (35%), Positives = 22/42 (52%), Gaps = 2/42 (4%)
 Frame = +1

Query: 616 GFVG--VLPRDQRWDVVVDLFFYRDPEXSEKDEQQARNRLGY 735
           GF G  +LPR ++  +   LF Y  P  SE ++  +R   GY
Sbjct: 599 GFPGRLLLPRGKKEGMPFQLFLYVSPVSSEYNQYNSRIWGGY 640


>EF591128-1|ABQ59246.1|  684|Apis mellifera hexamerin 70a protein.
          Length = 684

 Score = 25.0 bits (52), Expect = 0.83
 Identities = 15/42 (35%), Positives = 22/42 (52%), Gaps = 2/42 (4%)
 Frame = +1

Query: 616 GFVG--VLPRDQRWDVVVDLFFYRDPEXSEKDEQQARNRLGY 735
           GF G  +LPR ++  +   LF Y  P  SE ++  +R   GY
Sbjct: 599 GFPGRLLLPRGKKEGMPFQLFLYVSPVSSEYNQYNSRIWGGY 640


>AY500239-1|AAR92109.1|  555|Apis mellifera neuronal nicotinic
           acetylcholine receptoralpha7-1 protein.
          Length = 555

 Score = 23.0 bits (47), Expect = 3.3
 Identities = 11/32 (34%), Positives = 15/32 (46%), Gaps = 4/32 (12%)
 Frame = -3

Query: 670 TNQPQHPSAGHGEAH----PRSLNTSRANNHH 587
           T  P H + GHG +H    P   ++  A  HH
Sbjct: 411 TPGPHHHTMGHGHSHIHATPHHHHSHAATPHH 442


>AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.
          Length = 1598

 Score = 23.0 bits (47), Expect = 3.3
 Identities = 10/32 (31%), Positives = 17/32 (53%)
 Frame = -2

Query: 665 STTTSQRWSRGSTPTKPQHFTCQQPPHQTNRV 570
           +TTT+   +  +TP   Q+ +   PP Q + V
Sbjct: 665 TTTTTTTTTTTTTPNTTQNASATTPPPQVDEV 696


>AY375535-1|AAQ82648.1|  147|Apis mellifera doublesex protein.
          Length = 147

 Score = 21.8 bits (44), Expect = 7.7
 Identities = 8/16 (50%), Positives = 9/16 (56%)
 Frame = -1

Query: 630 HTHEASTLHVPTTTTS 583
           H H A   H+P T TS
Sbjct: 105 HPHTAMVTHLPQTLTS 120


>AF388659-1|AAK71995.1|  782|Apis mellifera
           1D-myo-inositol-trisphosphate 3-kinaseisoform A protein.
          Length = 782

 Score = 21.8 bits (44), Expect = 7.7
 Identities = 6/30 (20%), Positives = 16/30 (53%)
 Frame = +3

Query: 435 VLDPAQDHQPITEASYVNIPVIALCNTDSP 524
           ++DP ++++   E   + IP++   +   P
Sbjct: 167 IVDPVEENETYDEFDTIRIPIVRSLSKSPP 196


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 249,319
Number of Sequences: 438
Number of extensions: 5710
Number of successful extensions: 14
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 25610547
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)