Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP11_FL5_K09
         (796 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY331183-1|AAP94623.1|  953|Apis mellifera NMDA-type glutamate r...    24   1.4  
AY273778-1|AAP33487.1|  427|Apis mellifera ultraspiracle protein...    23   2.5  
AF263459-1|AAF73057.1|  427|Apis mellifera ultraspiracle protein...    23   2.5  
AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.             23   2.5  
AF388659-1|AAK71995.1|  782|Apis mellifera 1D-myo-inositol-trisp...    22   7.5  
EF625898-1|ABR45905.1|  686|Apis mellifera hexamerin protein.          21   10.0 
EF589162-1|ABQ84439.1|  686|Apis mellifera hexamerin 70c protein.      21   10.0 
DQ288391-1|ABC41341.1|  630|Apis mellifera vasa protein protein.       21   10.0 

>AY331183-1|AAP94623.1|  953|Apis mellifera NMDA-type glutamate
           receptor 1 protein.
          Length = 953

 Score = 24.2 bits (50), Expect = 1.4
 Identities = 10/31 (32%), Positives = 16/31 (51%)
 Frame = -3

Query: 617 PQHFTCPTTTTSNQ*SGKTWCCMG*QCPQIL 525
           P+   CP    ++  + KT+CC G  C  +L
Sbjct: 438 PEEILCPHFNVTDGETTKTFCCKG-YCMDLL 467


>AY273778-1|AAP33487.1|  427|Apis mellifera ultraspiracle protein
           protein.
          Length = 427

 Score = 23.4 bits (48), Expect = 2.5
 Identities = 10/18 (55%), Positives = 12/18 (66%)
 Frame = -1

Query: 658 TTSQRWSRGSTPRSLSTS 605
           T +Q WSRG+T  SL  S
Sbjct: 18  TQAQHWSRGNTWLSLDNS 35


>AF263459-1|AAF73057.1|  427|Apis mellifera ultraspiracle protein
           protein.
          Length = 427

 Score = 23.4 bits (48), Expect = 2.5
 Identities = 10/18 (55%), Positives = 12/18 (66%)
 Frame = -1

Query: 658 TTSQRWSRGSTPRSLSTS 605
           T +Q WSRG+T  SL  S
Sbjct: 18  TQAQHWSRGNTWLSLDNS 35


>AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.
          Length = 1598

 Score = 23.4 bits (48), Expect = 2.5
 Identities = 10/32 (31%), Positives = 17/32 (53%)
 Frame = -1

Query: 664 STTTSQRWSRGSTPRSLSTSRAQQPPHQTNRV 569
           +TTT+   +  +TP +   + A  PP Q + V
Sbjct: 665 TTTTTTTTTTTTTPNTTQNASATTPPPQVDEV 696


>AF388659-1|AAK71995.1|  782|Apis mellifera
           1D-myo-inositol-trisphosphate 3-kinaseisoform A protein.
          Length = 782

 Score = 21.8 bits (44), Expect = 7.5
 Identities = 6/30 (20%), Positives = 16/30 (53%)
 Frame = +2

Query: 434 VLDPAQDHQPITEASYVNIPVIALCNTDSP 523
           ++DP ++++   E   + IP++   +   P
Sbjct: 167 IVDPVEENETYDEFDTIRIPIVRSLSKSPP 196


>EF625898-1|ABR45905.1|  686|Apis mellifera hexamerin protein.
          Length = 686

 Score = 21.4 bits (43), Expect = 10.0
 Identities = 6/18 (33%), Positives = 13/18 (72%)
 Frame = +1

Query: 544 YPMQHQVFPLYWFDVVVV 597
           +P  ++++P Y+FD  V+
Sbjct: 159 FPAIYEIYPNYFFDSSVI 176


>EF589162-1|ABQ84439.1|  686|Apis mellifera hexamerin 70c protein.
          Length = 686

 Score = 21.4 bits (43), Expect = 10.0
 Identities = 6/18 (33%), Positives = 13/18 (72%)
 Frame = +1

Query: 544 YPMQHQVFPLYWFDVVVV 597
           +P  ++++P Y+FD  V+
Sbjct: 159 FPAIYEIYPNYFFDSSVI 176


>DQ288391-1|ABC41341.1|  630|Apis mellifera vasa protein protein.
          Length = 630

 Score = 21.4 bits (43), Expect = 10.0
 Identities = 9/14 (64%), Positives = 11/14 (78%)
 Frame = -1

Query: 412 ECSLDLVSKSTWCE 371
           E S+DLV  ST+CE
Sbjct: 260 ERSVDLVVTSTYCE 273


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 233,090
Number of Sequences: 438
Number of extensions: 5381
Number of successful extensions: 9
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 25125039
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)