Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP11_FL5_K01
(856 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF051782-1|AAC05373.1| 1248|Homo sapiens diaphanous 1 protein. 41 0.007
DQ067453-1|AAZ23040.1| 1262|Homo sapiens diaphanous-1 protein. 40 0.012
DQ067452-1|AAZ23039.1| 229|Homo sapiens diaphanous-1 protein. 40 0.012
BC117257-1|AAI17258.1| 1262|Homo sapiens diaphanous homolog 1 (D... 40 0.012
AY363395-1|AAQ63049.1| 1272|Homo sapiens diaphanous 1 protein. 40 0.012
AY360322-1|AAQ64023.1| 179|Homo sapiens diaphanous 1 protein. 40 0.012
AB209482-1|BAD92719.1| 1299|Homo sapiens Diaphanous 1 variant pr... 40 0.012
X99720-1|CAA68060.1| 491|Homo sapiens TPRC protein. 33 1.7
X97124-1|CAA65791.1| 491|Homo sapiens prcc protein. 33 1.7
BC010450-1|AAH10450.1| 491|Homo sapiens papillary renal cell ca... 33 1.7
BC004913-1|AAH04913.1| 491|Homo sapiens papillary renal cell ca... 33 1.7
AL590666-16|CAI16350.1| 491|Homo sapiens papillary renal cell c... 33 1.7
BC065551-1|AAH65551.1| 440|Homo sapiens WAS/WASL interacting pr... 32 2.3
AJ431177-1|CAD24007.1| 440|Homo sapiens WIRE protein protein. 32 2.3
AB043786-1|BAB85113.1| 440|Homo sapiens WICH protein. 32 2.3
X67337-1|CAA47752.1| 551|Homo sapiens Human pre-mRNA cleavage f... 32 3.1
X67336-1|CAA47751.1| 551|Homo sapiens HPBRII-7 protein. 32 3.1
L21990-1|AAA60301.1| 464|Homo sapiens spiceosomal protein protein. 32 3.1
BC015804-1|AAH15804.1| 481|Homo sapiens SF3A2 protein protein. 32 3.1
BC009903-1|AAH09903.1| 464|Homo sapiens splicing factor 3a, sub... 32 3.1
BC004434-1|AAH04434.1| 464|Homo sapiens splicing factor 3a, sub... 32 3.1
BC000714-1|AAH00714.1| 588|Homo sapiens CPSF6 protein protein. 32 3.1
AK223568-1|BAD97288.1| 551|Homo sapiens cleavage and polyadenyl... 32 3.1
AC005263-1|AAC25613.1| 464|Homo sapiens SP62_HUMAN protein. 32 3.1
S80905-1|AAB50686.1| 382|Homo sapiens Con1 protein. 31 5.3
BX537888-1|CAD97884.1| 500|Homo sapiens hypothetical protein pr... 31 5.3
BC018135-1|AAH18135.1| 471|Homo sapiens pre-mRNA cleavage facto... 31 5.3
AK022591-1|BAB14118.1| 237|Homo sapiens protein ( Homo sapiens ... 31 5.3
AJ275970-1|CAC81661.1| 471|Homo sapiens pre-mRNA cleavage facto... 31 5.3
>AF051782-1|AAC05373.1| 1248|Homo sapiens diaphanous 1 protein.
Length = 1248
Score = 40.7 bits (91), Expect = 0.007
Identities = 40/150 (26%), Positives = 45/150 (30%)
Frame = -3
Query: 707 PPXPPXPFFXPPPPXXRXGGGGXXXXXXXGGXXAXXXXGXXRXXXGRGVFXXFSXRXGXX 528
PP PP P PPPP GG G G G+ S G
Sbjct: 599 PPPPPPP---PPPPPPLPGGTAISPPPPLSGDATIPPPPPL--PEGVGIPSPSSLPGGTA 653
Query: 527 XXXLXXXXXRKKNXXIXFSPPPXXLXXFXGEXPPPPXVXXKRGFXXSPPGVXPXXXGGPP 348
+ PPP L G PPPP + + G PP + GGP
Sbjct: 654 IPPPPPLPGSAR-----IPPPPPPLPGSAGIPPPPPPLPGEAGMPPPPPPL----PGGPG 704
Query: 347 XXXXPPLXRGXGXXXPKKXGXXSQKKPPXG 258
PP G G P G PP G
Sbjct: 705 IPPPPPFPGGPG-IPPPPPGMGMPPPPPFG 733
>DQ067453-1|AAZ23040.1| 1262|Homo sapiens diaphanous-1 protein.
Length = 1262
Score = 39.9 bits (89), Expect = 0.012
Identities = 24/71 (33%), Positives = 27/71 (38%)
Frame = -3
Query: 470 PPPXXLXXFXGEXPPPPXVXXKRGFXXSPPGVXPXXXGGPPXXXXPPLXRGXGXXXPKKX 291
PPP L G PPPP + + G PP + GGP PP G G P
Sbjct: 679 PPPPPLPGSAGIPPPPPPLPGEAGMPPPPPPL----PGGPGIPPPPPFPGGPG-IPPPPP 733
Query: 290 GXXSQKKPPXG 258
G PP G
Sbjct: 734 GMGMPPPPPFG 744
Score = 37.1 bits (82), Expect = 0.081
Identities = 25/72 (34%), Positives = 27/72 (37%), Gaps = 1/72 (1%)
Frame = -3
Query: 470 PPPXXLXXFXGEXPPPPXVXXKRGFXXSPPGVXPXXXGGPPXXXXPPLXRGXGXXXPKK- 294
PPP L PPPP + G PP + P G PP PPL G G P
Sbjct: 666 PPPPPLPGSARIPPPPPPLPGSAGIPPPPPPL-PGEAGMPP--PPPPLPGGPGIPPPPPF 722
Query: 293 XGXXSQKKPPXG 258
G PP G
Sbjct: 723 PGGPGIPPPPPG 734
>DQ067452-1|AAZ23039.1| 229|Homo sapiens diaphanous-1 protein.
Length = 229
Score = 39.9 bits (89), Expect = 0.012
Identities = 24/71 (33%), Positives = 27/71 (38%)
Frame = -3
Query: 470 PPPXXLXXFXGEXPPPPXVXXKRGFXXSPPGVXPXXXGGPPXXXXPPLXRGXGXXXPKKX 291
PPP L G PPPP + + G PP + GGP PP G G P
Sbjct: 73 PPPPPLPGSAGIPPPPPPLPGEAGMPPPPPPL----PGGPGIPPPPPFPGGPG-IPPPPP 127
Query: 290 GXXSQKKPPXG 258
G PP G
Sbjct: 128 GMGMPPPPPFG 138
Score = 37.1 bits (82), Expect = 0.081
Identities = 25/72 (34%), Positives = 27/72 (37%), Gaps = 1/72 (1%)
Frame = -3
Query: 470 PPPXXLXXFXGEXPPPPXVXXKRGFXXSPPGVXPXXXGGPPXXXXPPLXRGXGXXXPKK- 294
PPP L PPPP + G PP + P G PP PPL G G P
Sbjct: 60 PPPPPLPGSARIPPPPPPLPGSAGIPPPPPPL-PGEAGMPPPP--PPLPGGPGIPPPPPF 116
Query: 293 XGXXSQKKPPXG 258
G PP G
Sbjct: 117 PGGPGIPPPPPG 128
>BC117257-1|AAI17258.1| 1262|Homo sapiens diaphanous homolog 1
(Drosophila) protein.
Length = 1262
Score = 39.9 bits (89), Expect = 0.012
Identities = 24/71 (33%), Positives = 27/71 (38%)
Frame = -3
Query: 470 PPPXXLXXFXGEXPPPPXVXXKRGFXXSPPGVXPXXXGGPPXXXXPPLXRGXGXXXPKKX 291
PPP L G PPPP + + G PP + GGP PP G G P
Sbjct: 679 PPPPPLPGSAGIPPPPPPLPGEAGMPPPPPPL----PGGPGIPPPPPFPGGPG-IPPPPP 733
Query: 290 GXXSQKKPPXG 258
G PP G
Sbjct: 734 GMGMPPPPPFG 744
Score = 37.1 bits (82), Expect = 0.081
Identities = 25/72 (34%), Positives = 27/72 (37%), Gaps = 1/72 (1%)
Frame = -3
Query: 470 PPPXXLXXFXGEXPPPPXVXXKRGFXXSPPGVXPXXXGGPPXXXXPPLXRGXGXXXPKK- 294
PPP L PPPP + G PP + P G PP PPL G G P
Sbjct: 666 PPPPPLPGSARIPPPPPPLPGSAGIPPPPPPL-PGEAGMPP--PPPPLPGGPGIPPPPPF 722
Query: 293 XGXXSQKKPPXG 258
G PP G
Sbjct: 723 PGGPGIPPPPPG 734
>AY363395-1|AAQ63049.1| 1272|Homo sapiens diaphanous 1 protein.
Length = 1272
Score = 39.9 bits (89), Expect = 0.012
Identities = 24/71 (33%), Positives = 27/71 (38%)
Frame = -3
Query: 470 PPPXXLXXFXGEXPPPPXVXXKRGFXXSPPGVXPXXXGGPPXXXXPPLXRGXGXXXPKKX 291
PPP L G PPPP + + G PP + GGP PP G G P
Sbjct: 689 PPPPPLPGSAGIPPPPPPLPGEAGMPPPPPPL----PGGPGIPPPPPFPGGPG-IPPPPP 743
Query: 290 GXXSQKKPPXG 258
G PP G
Sbjct: 744 GMGMPPPPPFG 754
Score = 37.1 bits (82), Expect = 0.081
Identities = 25/72 (34%), Positives = 27/72 (37%), Gaps = 1/72 (1%)
Frame = -3
Query: 470 PPPXXLXXFXGEXPPPPXVXXKRGFXXSPPGVXPXXXGGPPXXXXPPLXRGXGXXXPKK- 294
PPP L PPPP + G PP + P G PP PPL G G P
Sbjct: 676 PPPPPLPGSARIPPPPPPLPGSAGIPPPPPPL-PGEAGMPPPP--PPLPGGPGIPPPPPF 732
Query: 293 XGXXSQKKPPXG 258
G PP G
Sbjct: 733 PGGPGIPPPPPG 744
>AY360322-1|AAQ64023.1| 179|Homo sapiens diaphanous 1 protein.
Length = 179
Score = 39.9 bits (89), Expect = 0.012
Identities = 24/71 (33%), Positives = 27/71 (38%)
Frame = -3
Query: 470 PPPXXLXXFXGEXPPPPXVXXKRGFXXSPPGVXPXXXGGPPXXXXPPLXRGXGXXXPKKX 291
PPP L G PPPP + + G PP + GGP PP G G P
Sbjct: 73 PPPPPLPGSAGIPPPPPPLPGEAGMPPPPPPL----PGGPGIPPPPPFPGGPG-IPPPPP 127
Query: 290 GXXSQKKPPXG 258
G PP G
Sbjct: 128 GMGMPPPPPFG 138
Score = 37.1 bits (82), Expect = 0.081
Identities = 25/72 (34%), Positives = 27/72 (37%), Gaps = 1/72 (1%)
Frame = -3
Query: 470 PPPXXLXXFXGEXPPPPXVXXKRGFXXSPPGVXPXXXGGPPXXXXPPLXRGXGXXXPKK- 294
PPP L PPPP + G PP + P G PP PPL G G P
Sbjct: 60 PPPPPLPGSARIPPPPPPLPGSAGIPPPPPPL-PGEAGMPPPP--PPLPGGPGIPPPPPF 116
Query: 293 XGXXSQKKPPXG 258
G PP G
Sbjct: 117 PGGPGIPPPPPG 128
>AB209482-1|BAD92719.1| 1299|Homo sapiens Diaphanous 1 variant
protein.
Length = 1299
Score = 39.9 bits (89), Expect = 0.012
Identities = 24/71 (33%), Positives = 27/71 (38%)
Frame = -3
Query: 470 PPPXXLXXFXGEXPPPPXVXXKRGFXXSPPGVXPXXXGGPPXXXXPPLXRGXGXXXPKKX 291
PPP L G PPPP + + G PP + GGP PP G G P
Sbjct: 716 PPPPPLPGSAGIPPPPPPLPGEAGMPPPPPPL----PGGPGIPPPPPFPGGPG-IPPPPP 770
Query: 290 GXXSQKKPPXG 258
G PP G
Sbjct: 771 GMGMPPPPPFG 781
Score = 37.1 bits (82), Expect = 0.081
Identities = 25/72 (34%), Positives = 27/72 (37%), Gaps = 1/72 (1%)
Frame = -3
Query: 470 PPPXXLXXFXGEXPPPPXVXXKRGFXXSPPGVXPXXXGGPPXXXXPPLXRGXGXXXPKK- 294
PPP L PPPP + G PP + P G PP PPL G G P
Sbjct: 703 PPPPPLPGSARIPPPPPPLPGSAGIPPPPPPL-PGEAGMPPPP--PPLPGGPGIPPPPPF 759
Query: 293 XGXXSQKKPPXG 258
G PP G
Sbjct: 760 PGGPGIPPPPPG 771
>X99720-1|CAA68060.1| 491|Homo sapiens TPRC protein.
Length = 491
Score = 32.7 bits (71), Expect = 1.7
Identities = 25/75 (33%), Positives = 27/75 (36%), Gaps = 3/75 (4%)
Frame = -3
Query: 470 PPPXXLXXFXGEX---PPPPXVXXKRGFXXSPPGVXPXXXGGPPXXXXPPLXRGXGXXXP 300
PPP L G+ PPPP GF PPGV P G + G G P
Sbjct: 63 PPPLLLPPPTGDPRLQPPPPLPFGLGGFPP-PPGVSPAEAAG--------VGEGLGLGLP 113
Query: 299 KKXGXXSQKKPPXGG 255
G PP GG
Sbjct: 114 SPRGPGLNLPPPIGG 128
>X97124-1|CAA65791.1| 491|Homo sapiens prcc protein.
Length = 491
Score = 32.7 bits (71), Expect = 1.7
Identities = 25/75 (33%), Positives = 27/75 (36%), Gaps = 3/75 (4%)
Frame = -3
Query: 470 PPPXXLXXFXGEX---PPPPXVXXKRGFXXSPPGVXPXXXGGPPXXXXPPLXRGXGXXXP 300
PPP L G+ PPPP GF PPGV P G + G G P
Sbjct: 63 PPPLLLPPPTGDPRLQPPPPLPFGLGGFPP-PPGVSPAEAAG--------VGEGLGLGLP 113
Query: 299 KKXGXXSQKKPPXGG 255
G PP GG
Sbjct: 114 SPRGPGLNLPPPIGG 128
>BC010450-1|AAH10450.1| 491|Homo sapiens papillary renal cell
carcinoma (translocation-associated) protein.
Length = 491
Score = 32.7 bits (71), Expect = 1.7
Identities = 25/75 (33%), Positives = 27/75 (36%), Gaps = 3/75 (4%)
Frame = -3
Query: 470 PPPXXLXXFXGEX---PPPPXVXXKRGFXXSPPGVXPXXXGGPPXXXXPPLXRGXGXXXP 300
PPP L G+ PPPP GF PPGV P G + G G P
Sbjct: 63 PPPLLLPPPTGDPRLQPPPPLPFGLGGFPP-PPGVSPAEAAG--------VGEGLGLGLP 113
Query: 299 KKXGXXSQKKPPXGG 255
G PP GG
Sbjct: 114 SPRGPGLNLPPPIGG 128
>BC004913-1|AAH04913.1| 491|Homo sapiens papillary renal cell
carcinoma (translocation-associated) protein.
Length = 491
Score = 32.7 bits (71), Expect = 1.7
Identities = 25/75 (33%), Positives = 27/75 (36%), Gaps = 3/75 (4%)
Frame = -3
Query: 470 PPPXXLXXFXGEX---PPPPXVXXKRGFXXSPPGVXPXXXGGPPXXXXPPLXRGXGXXXP 300
PPP L G+ PPPP GF PPGV P G + G G P
Sbjct: 63 PPPLLLPPPTGDPRLQPPPPLPFGLGGFPP-PPGVSPAEAAG--------VGEGLGLGLP 113
Query: 299 KKXGXXSQKKPPXGG 255
G PP GG
Sbjct: 114 SPRGPGLNLPPPIGG 128
>AL590666-16|CAI16350.1| 491|Homo sapiens papillary renal cell
carcinoma (translocation-associated) protein.
Length = 491
Score = 32.7 bits (71), Expect = 1.7
Identities = 25/75 (33%), Positives = 27/75 (36%), Gaps = 3/75 (4%)
Frame = -3
Query: 470 PPPXXLXXFXGEX---PPPPXVXXKRGFXXSPPGVXPXXXGGPPXXXXPPLXRGXGXXXP 300
PPP L G+ PPPP GF PPGV P G + G G P
Sbjct: 63 PPPLLLPPPTGDPRLQPPPPLPFGLGGFPP-PPGVSPAEAAG--------VGEGLGLGLP 113
Query: 299 KKXGXXSQKKPPXGG 255
G PP GG
Sbjct: 114 SPRGPGLNLPPPIGG 128
>BC065551-1|AAH65551.1| 440|Homo sapiens WAS/WASL interacting
protein family, member 2 protein.
Length = 440
Score = 32.3 bits (70), Expect = 2.3
Identities = 17/49 (34%), Positives = 19/49 (38%), Gaps = 2/49 (4%)
Frame = -3
Query: 470 PPPXXLXXFXGEXPPPPXVXXKRGFXXSPPGVXPXXXGG--PPXXXXPP 330
PPP G PPPP + G +PP P G PP PP
Sbjct: 312 PPPARDPPSRGAAPPPPPPVIRNGARDAPPPPPPYRMHGSEPPSRGKPP 360
Score = 30.3 bits (65), Expect = 9.3
Identities = 17/55 (30%), Positives = 19/55 (34%), Gaps = 4/55 (7%)
Frame = -3
Query: 470 PPPXXLXXFXGEXPPPPXVXXKRG----FXXSPPGVXPXXXGGPPXXXXPPLXRG 318
PPP + + PPPP G PP GPP PPL G
Sbjct: 327 PPPPVIRNGARDAPPPPPPYRMHGSEPPSRGKPPPPPSRTPAGPPPPPPPPLRNG 381
>AJ431177-1|CAD24007.1| 440|Homo sapiens WIRE protein protein.
Length = 440
Score = 32.3 bits (70), Expect = 2.3
Identities = 17/49 (34%), Positives = 19/49 (38%), Gaps = 2/49 (4%)
Frame = -3
Query: 470 PPPXXLXXFXGEXPPPPXVXXKRGFXXSPPGVXPXXXGG--PPXXXXPP 330
PPP G PPPP + G +PP P G PP PP
Sbjct: 312 PPPARDPPSRGAAPPPPPPVIRNGARDAPPPPPPYRMHGSEPPSRGKPP 360
Score = 30.3 bits (65), Expect = 9.3
Identities = 17/55 (30%), Positives = 19/55 (34%), Gaps = 4/55 (7%)
Frame = -3
Query: 470 PPPXXLXXFXGEXPPPPXVXXKRG----FXXSPPGVXPXXXGGPPXXXXPPLXRG 318
PPP + + PPPP G PP GPP PPL G
Sbjct: 327 PPPPVIRNGARDAPPPPPPYRMHGSEPPSRGKPPPPPSRTPAGPPPPPPPPLRNG 381
>AB043786-1|BAB85113.1| 440|Homo sapiens WICH protein.
Length = 440
Score = 32.3 bits (70), Expect = 2.3
Identities = 17/49 (34%), Positives = 19/49 (38%), Gaps = 2/49 (4%)
Frame = -3
Query: 470 PPPXXLXXFXGEXPPPPXVXXKRGFXXSPPGVXPXXXGG--PPXXXXPP 330
PPP G PPPP + G +PP P G PP PP
Sbjct: 312 PPPARDPPSRGAAPPPPPPVIRNGARDAPPPPPPYRMHGSEPPSRGKPP 360
Score = 30.3 bits (65), Expect = 9.3
Identities = 17/55 (30%), Positives = 19/55 (34%), Gaps = 4/55 (7%)
Frame = -3
Query: 470 PPPXXLXXFXGEXPPPPXVXXKRG----FXXSPPGVXPXXXGGPPXXXXPPLXRG 318
PPP + + PPPP G PP GPP PPL G
Sbjct: 327 PPPPVIRNGARDAPPPPPPYRMHGSEPPSRGKPPPPPSRTPAGPPPPPPPPLRNG 381
>X67337-1|CAA47752.1| 551|Homo sapiens Human pre-mRNA cleavage
factor I 68 kDa subunit protein.
Length = 551
Score = 31.9 bits (69), Expect = 3.1
Identities = 19/53 (35%), Positives = 22/53 (41%), Gaps = 6/53 (11%)
Frame = -3
Query: 470 PPPXXLXXFXGEXPPPPXVXXKRGFXXS-----PPGVXPXXXG-GPPXXXXPP 330
PPP G+ PPPP + + F PPG P G GPP PP
Sbjct: 260 PPPLAGPPNRGDRPPPPVLFPGQPFGQPPLGPLPPGPPPPVPGYGPPPGPPPP 312
>X67336-1|CAA47751.1| 551|Homo sapiens HPBRII-7 protein.
Length = 551
Score = 31.9 bits (69), Expect = 3.1
Identities = 19/53 (35%), Positives = 22/53 (41%), Gaps = 6/53 (11%)
Frame = -3
Query: 470 PPPXXLXXFXGEXPPPPXVXXKRGFXXS-----PPGVXPXXXG-GPPXXXXPP 330
PPP G+ PPPP + + F PPG P G GPP PP
Sbjct: 260 PPPLAGPPNRGDRPPPPVLFPGQPFGQPPLGPLPPGPPPPVPGYGPPPGPPPP 312
>L21990-1|AAA60301.1| 464|Homo sapiens spiceosomal protein protein.
Length = 464
Score = 31.9 bits (69), Expect = 3.1
Identities = 18/51 (35%), Positives = 19/51 (37%), Gaps = 1/51 (1%)
Frame = -3
Query: 470 PPPXXLXXFXGEXPPPPXVXXKR-GFXXSPPGVXPXXXGGPPXXXXPPLXR 321
P P G P PP V G PPGV P G P PP+ R
Sbjct: 396 PAPGMHPQAPGVHPQPPGVHPSAPGVHPQPPGVHPSNPGVHPPTPMPPMLR 446
>BC015804-1|AAH15804.1| 481|Homo sapiens SF3A2 protein protein.
Length = 481
Score = 31.9 bits (69), Expect = 3.1
Identities = 18/51 (35%), Positives = 19/51 (37%), Gaps = 1/51 (1%)
Frame = -3
Query: 470 PPPXXLXXFXGEXPPPPXVXXKR-GFXXSPPGVXPXXXGGPPXXXXPPLXR 321
P P G P PP V G PPGV P G P PP+ R
Sbjct: 396 PAPGMHPQAPGVHPQPPGVHPSAPGVHPQPPGVHPSNPGVHPPTPMPPMLR 446
>BC009903-1|AAH09903.1| 464|Homo sapiens splicing factor 3a,
subunit 2, 66kDa protein.
Length = 464
Score = 31.9 bits (69), Expect = 3.1
Identities = 18/51 (35%), Positives = 19/51 (37%), Gaps = 1/51 (1%)
Frame = -3
Query: 470 PPPXXLXXFXGEXPPPPXVXXKR-GFXXSPPGVXPXXXGGPPXXXXPPLXR 321
P P G P PP V G PPGV P G P PP+ R
Sbjct: 396 PAPGMHPQAPGVHPQPPGVHPSAPGVHPQPPGVHPSNPGVHPPTPMPPMLR 446
>BC004434-1|AAH04434.1| 464|Homo sapiens splicing factor 3a,
subunit 2, 66kDa protein.
Length = 464
Score = 31.9 bits (69), Expect = 3.1
Identities = 18/51 (35%), Positives = 19/51 (37%), Gaps = 1/51 (1%)
Frame = -3
Query: 470 PPPXXLXXFXGEXPPPPXVXXKR-GFXXSPPGVXPXXXGGPPXXXXPPLXR 321
P P G P PP V G PPGV P G P PP+ R
Sbjct: 396 PAPGMHPQAPGVHPQPPGVHPSAPGVHPQPPGVHPSNPGVHPPTPMPPMLR 446
>BC000714-1|AAH00714.1| 588|Homo sapiens CPSF6 protein protein.
Length = 588
Score = 31.9 bits (69), Expect = 3.1
Identities = 19/53 (35%), Positives = 22/53 (41%), Gaps = 6/53 (11%)
Frame = -3
Query: 470 PPPXXLXXFXGEXPPPPXVXXKRGFXXS-----PPGVXPXXXG-GPPXXXXPP 330
PPP G+ PPPP + + F PPG P G GPP PP
Sbjct: 297 PPPLAGPPNRGDRPPPPVLFPGQPFGQPPLGPLPPGPPPPVPGYGPPPGPPPP 349
>AK223568-1|BAD97288.1| 551|Homo sapiens cleavage and
polyadenylation specific factor 6, 68 kD subunit variant
protein.
Length = 551
Score = 31.9 bits (69), Expect = 3.1
Identities = 19/53 (35%), Positives = 22/53 (41%), Gaps = 6/53 (11%)
Frame = -3
Query: 470 PPPXXLXXFXGEXPPPPXVXXKRGFXXS-----PPGVXPXXXG-GPPXXXXPP 330
PPP G+ PPPP + + F PPG P G GPP PP
Sbjct: 260 PPPLAGPPNRGDRPPPPVLFPGQPFGQPPLGPLPPGPPPPVPGYGPPPGPPPP 312
>AC005263-1|AAC25613.1| 464|Homo sapiens SP62_HUMAN protein.
Length = 464
Score = 31.9 bits (69), Expect = 3.1
Identities = 18/51 (35%), Positives = 19/51 (37%), Gaps = 1/51 (1%)
Frame = -3
Query: 470 PPPXXLXXFXGEXPPPPXVXXKR-GFXXSPPGVXPXXXGGPPXXXXPPLXR 321
P P G P PP V G PPGV P G P PP+ R
Sbjct: 396 PAPGMHPQAPGVHPQPPGVHPSAPGVHPQPPGVHPSNPGVHPPTPMPPMLR 446
>S80905-1|AAB50686.1| 382|Homo sapiens Con1 protein.
Length = 382
Score = 31.1 bits (67), Expect = 5.3
Identities = 21/60 (35%), Positives = 23/60 (38%), Gaps = 3/60 (5%)
Frame = -3
Query: 428 PPPXVXXKRGFXXSPPGVX---PXXXGGPPXXXXPPLXRGXGXXXPKKXGXXSQKKPPXG 258
PPP K SPPG P G P PP + G P + G SQ PP G
Sbjct: 190 PPPQGDNKSQSARSPPGKPQGPPPQGGNQPQGPPPPPGKPQGP--PPQGGNKSQGPPPPG 247
>BX537888-1|CAD97884.1| 500|Homo sapiens hypothetical protein
protein.
Length = 500
Score = 31.1 bits (67), Expect = 5.3
Identities = 16/47 (34%), Positives = 18/47 (38%)
Frame = -3
Query: 470 PPPXXLXXFXGEXPPPPXVXXKRGFXXSPPGVXPXXXGGPPXXXXPP 330
PPP L G PPPP + + PP P PP PP
Sbjct: 272 PPPPPLSSSFGVPPPPPGIHYQH--LMPPPPRLPPHLAVPPPGAIPP 316
>BC018135-1|AAH18135.1| 471|Homo sapiens pre-mRNA cleavage factor
I, 59 kDa subunit protein.
Length = 471
Score = 31.1 bits (67), Expect = 5.3
Identities = 16/47 (34%), Positives = 18/47 (38%)
Frame = -3
Query: 470 PPPXXLXXFXGEXPPPPXVXXKRGFXXSPPGVXPXXXGGPPXXXXPP 330
PPP L G PPPP + + PP P PP PP
Sbjct: 243 PPPPPLSSSFGVPPPPPGIHYQH--LMPPPPRLPPHLAVPPPGAIPP 287
>AK022591-1|BAB14118.1| 237|Homo sapiens protein ( Homo sapiens
cDNA FLJ12529 fis, clone NT2RM4000156, weakly similar to
H.sapiens HPBRII-7 gene. ).
Length = 237
Score = 31.1 bits (67), Expect = 5.3
Identities = 16/47 (34%), Positives = 18/47 (38%)
Frame = -3
Query: 470 PPPXXLXXFXGEXPPPPXVXXKRGFXXSPPGVXPXXXGGPPXXXXPP 330
PPP L G PPPP + + PP P PP PP
Sbjct: 9 PPPPPLSSSFGVPPPPPGIHYQH--LMPPPPRLPPHLAVPPPGAIPP 53
>AJ275970-1|CAC81661.1| 471|Homo sapiens pre-mRNA cleavage factor
I, 59 kDa subunit protein.
Length = 471
Score = 31.1 bits (67), Expect = 5.3
Identities = 16/47 (34%), Positives = 18/47 (38%)
Frame = -3
Query: 470 PPPXXLXXFXGEXPPPPXVXXKRGFXXSPPGVXPXXXGGPPXXXXPP 330
PPP L G PPPP + + PP P PP PP
Sbjct: 243 PPPPPLSSSFGVPPPPPGIHYQH--LMPPPPRLPPHLAVPPPGAIPP 287
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 83,770,843
Number of Sequences: 237096
Number of extensions: 1631812
Number of successful extensions: 6753
Number of sequences better than 10.0: 29
Number of HSP's better than 10.0 without gapping: 2758
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5966
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 10872716010
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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