Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP11_FL5_J14
         (955 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ509090-1|CAD48858.1|  625|Homo sapiens Wiskott-Aldrich syndrom...    26   4.6  
BC040943-1|AAH40943.1|  498|Homo sapiens WAS protein family, mem...    26   4.7  
AL096774-6|CAC18518.1|  498|Homo sapiens WAS protein family, mem...    26   4.7  
AB026542-1|BAA81795.1|  498|Homo sapiens WASP-family protein pro...    26   4.7  
AF134304-1|AAD33053.2|  496|Homo sapiens Scar2 protein.                26   4.7  

>AJ509090-1|CAD48858.1|  625|Homo sapiens Wiskott-Aldrich syndrome
           protein family member 4 protein.
          Length = 625

 Score = 25.8 bits (54), Expect(2) = 4.6
 Identities = 9/17 (52%), Positives = 9/17 (52%)
 Frame = +2

Query: 584 PPPPPPXXXXXXGXXPP 634
           PPPPPP      G  PP
Sbjct: 461 PPPPPPIGFGSPGTPPP 477



 Score = 24.2 bits (50), Expect(2) = 4.6
 Identities = 10/29 (34%), Positives = 10/29 (34%)
 Frame = +2

Query: 515 PPXFXXXXXXXXXXPXXXXXXXPPPPPPP 601
           PP            P       PPPPPPP
Sbjct: 428 PPPAPPLGSPPSSKPGFAPPPAPPPPPPP 456


>BC040943-1|AAH40943.1|  498|Homo sapiens WAS protein family, member
           2 protein.
          Length = 498

 Score = 25.8 bits (54), Expect(2) = 4.7
 Identities = 9/17 (52%), Positives = 9/17 (52%)
 Frame = +2

Query: 584 PPPPPPXXXXXXGXXPP 634
           PPPPPP      G  PP
Sbjct: 333 PPPPPPVGFGSPGTPPP 349



 Score = 24.2 bits (50), Expect(2) = 4.7
 Identities = 10/29 (34%), Positives = 10/29 (34%)
 Frame = +2

Query: 515 PPXFXXXXXXXXXXPXXXXXXXPPPPPPP 601
           PP            P       PPPPPPP
Sbjct: 300 PPPAPPLGSPPGPKPGFAPPPAPPPPPPP 328


>AL096774-6|CAC18518.1|  498|Homo sapiens WAS protein family, member
           2 protein.
          Length = 498

 Score = 25.8 bits (54), Expect(2) = 4.7
 Identities = 9/17 (52%), Positives = 9/17 (52%)
 Frame = +2

Query: 584 PPPPPPXXXXXXGXXPP 634
           PPPPPP      G  PP
Sbjct: 333 PPPPPPVGFGSPGTPPP 349



 Score = 24.2 bits (50), Expect(2) = 4.7
 Identities = 10/29 (34%), Positives = 10/29 (34%)
 Frame = +2

Query: 515 PPXFXXXXXXXXXXPXXXXXXXPPPPPPP 601
           PP            P       PPPPPPP
Sbjct: 300 PPPAPPLGSPPGPKPGFAPPPAPPPPPPP 328


>AB026542-1|BAA81795.1|  498|Homo sapiens WASP-family protein
           protein.
          Length = 498

 Score = 25.8 bits (54), Expect(2) = 4.7
 Identities = 9/17 (52%), Positives = 9/17 (52%)
 Frame = +2

Query: 584 PPPPPPXXXXXXGXXPP 634
           PPPPPP      G  PP
Sbjct: 333 PPPPPPVGFGSPGTPPP 349



 Score = 24.2 bits (50), Expect(2) = 4.7
 Identities = 10/29 (34%), Positives = 10/29 (34%)
 Frame = +2

Query: 515 PPXFXXXXXXXXXXPXXXXXXXPPPPPPP 601
           PP            P       PPPPPPP
Sbjct: 300 PPPAPPLGSPPGPKPGFAPPPAPPPPPPP 328


>AF134304-1|AAD33053.2|  496|Homo sapiens Scar2 protein.
          Length = 496

 Score = 25.8 bits (54), Expect(2) = 4.7
 Identities = 9/17 (52%), Positives = 9/17 (52%)
 Frame = +2

Query: 584 PPPPPPXXXXXXGXXPP 634
           PPPPPP      G  PP
Sbjct: 332 PPPPPPIGFGSPGTPPP 348



 Score = 24.2 bits (50), Expect(2) = 4.7
 Identities = 10/29 (34%), Positives = 10/29 (34%)
 Frame = +2

Query: 515 PPXFXXXXXXXXXXPXXXXXXXPPPPPPP 601
           PP            P       PPPPPPP
Sbjct: 299 PPPAPPLGSPPSSKPGFAPPPAPPPPPPP 327


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 72,809,826
Number of Sequences: 237096
Number of extensions: 1565835
Number of successful extensions: 34865
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 3874
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13457
length of database: 76,859,062
effective HSP length: 90
effective length of database: 55,520,422
effective search space used: 12603135794
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)