Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP11_FL5_J09
         (797 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY569719-1|AAS86672.1|  401|Apis mellifera feminizer protein.          24   1.4  
AY569718-1|AAS86671.1|  401|Apis mellifera feminizer protein.          24   1.4  
AY569715-1|AAS86668.1|  401|Apis mellifera feminizer protein.          24   1.4  
AY569713-1|AAS86666.1|  401|Apis mellifera feminizer protein.          24   1.4  
AY569711-1|AAS86664.1|  401|Apis mellifera feminizer protein.          24   1.4  
AY569702-1|AAS86655.1|  400|Apis mellifera feminizer protein.          24   1.4  
AY350616-1|AAQ57658.1|  401|Apis mellifera complementary sex det...    24   1.4  
AY569714-1|AAS86667.1|  401|Apis mellifera feminizer protein.          24   1.9  
AF023619-1|AAC39040.1|  355|Apis mellifera arginine kinase protein.    22   7.6  

>AY569719-1|AAS86672.1|  401|Apis mellifera feminizer protein.
          Length = 401

 Score = 24.2 bits (50), Expect = 1.4
 Identities = 12/34 (35%), Positives = 18/34 (52%)
 Frame = +2

Query: 578 IPDSIHQTTPDLTSISINPLNAVLKRSSRRGLKP 679
           +P     T+ +L    INP + +LKR +  G KP
Sbjct: 136 LPGKPTTTSDELKRDIINPEDVMLKRRTGEGSKP 169


>AY569718-1|AAS86671.1|  401|Apis mellifera feminizer protein.
          Length = 401

 Score = 24.2 bits (50), Expect = 1.4
 Identities = 12/34 (35%), Positives = 18/34 (52%)
 Frame = +2

Query: 578 IPDSIHQTTPDLTSISINPLNAVLKRSSRRGLKP 679
           +P     T+ +L    INP + +LKR +  G KP
Sbjct: 136 LPGKPTTTSDELKRDIINPEDVMLKRRTGEGSKP 169


>AY569715-1|AAS86668.1|  401|Apis mellifera feminizer protein.
          Length = 401

 Score = 24.2 bits (50), Expect = 1.4
 Identities = 12/34 (35%), Positives = 18/34 (52%)
 Frame = +2

Query: 578 IPDSIHQTTPDLTSISINPLNAVLKRSSRRGLKP 679
           +P     T+ +L    INP + +LKR +  G KP
Sbjct: 136 LPGKPTTTSDELKRDIINPEDVMLKRRTGEGSKP 169


>AY569713-1|AAS86666.1|  401|Apis mellifera feminizer protein.
          Length = 401

 Score = 24.2 bits (50), Expect = 1.4
 Identities = 12/34 (35%), Positives = 18/34 (52%)
 Frame = +2

Query: 578 IPDSIHQTTPDLTSISINPLNAVLKRSSRRGLKP 679
           +P     T+ +L    INP + +LKR +  G KP
Sbjct: 136 LPGKPTTTSDELKRDIINPEDVMLKRRTGEGSKP 169


>AY569711-1|AAS86664.1|  401|Apis mellifera feminizer protein.
          Length = 401

 Score = 24.2 bits (50), Expect = 1.4
 Identities = 12/34 (35%), Positives = 18/34 (52%)
 Frame = +2

Query: 578 IPDSIHQTTPDLTSISINPLNAVLKRSSRRGLKP 679
           +P     T+ +L    INP + +LKR +  G KP
Sbjct: 136 LPGKPTTTSDELKRDIINPEDVMLKRRTGEGSKP 169


>AY569702-1|AAS86655.1|  400|Apis mellifera feminizer protein.
          Length = 400

 Score = 24.2 bits (50), Expect = 1.4
 Identities = 12/34 (35%), Positives = 18/34 (52%)
 Frame = +2

Query: 578 IPDSIHQTTPDLTSISINPLNAVLKRSSRRGLKP 679
           +P     T+ +L    INP + +LKR +  G KP
Sbjct: 136 LPGKPTTTSDELKRDIINPEDVMLKRRTGEGSKP 169


>AY350616-1|AAQ57658.1|  401|Apis mellifera complementary sex
           determiner protein.
          Length = 401

 Score = 24.2 bits (50), Expect = 1.4
 Identities = 12/34 (35%), Positives = 18/34 (52%)
 Frame = +2

Query: 578 IPDSIHQTTPDLTSISINPLNAVLKRSSRRGLKP 679
           +P     T+ +L    INP + +LKR +  G KP
Sbjct: 136 LPGKPTTTSDELKRDIINPEDVMLKRRTGEGSKP 169


>AY569714-1|AAS86667.1|  401|Apis mellifera feminizer protein.
          Length = 401

 Score = 23.8 bits (49), Expect = 1.9
 Identities = 12/34 (35%), Positives = 18/34 (52%)
 Frame = +2

Query: 578 IPDSIHQTTPDLTSISINPLNAVLKRSSRRGLKP 679
           +P     T+ +L    INP + +LKR +  G KP
Sbjct: 136 LPGKPTTTSDELKRGIINPEDVMLKRRTGEGSKP 169


>AF023619-1|AAC39040.1|  355|Apis mellifera arginine kinase protein.
          Length = 355

 Score = 21.8 bits (44), Expect = 7.6
 Identities = 8/17 (47%), Positives = 11/17 (64%)
 Frame = -3

Query: 636 RGLMEMDVKSGVVWCME 586
           RG+   D K+ +VWC E
Sbjct: 207 RGIYHNDDKTFLVWCNE 223


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 214,884
Number of Sequences: 438
Number of extensions: 4850
Number of successful extensions: 14
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 25246416
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)