Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP11_FL5_J02
         (855 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC032099-1|AAH32099.1|  406|Homo sapiens pygopus homolog 2 (Dros...    32   2.3  
BC006132-1|AAH06132.2|  406|Homo sapiens pygopus homolog 2 (Dros...    32   2.3  
AL451085-7|CAI13244.1|  406|Homo sapiens pygopus homolog 2 (Dros...    32   2.3  
AL451085-6|CAI13243.1|  369|Homo sapiens pygopus homolog 2 (Dros...    32   2.3  
AK092389-1|BAC03877.1|  406|Homo sapiens protein ( Homo sapiens ...    32   2.3  
AF457208-1|AAL91371.1|  406|Homo sapiens pygopus 2 protein.            32   2.3  
AB113650-1|BAD93185.1|  100|Homo sapiens prostate collagen tripl...    31   5.3  

>BC032099-1|AAH32099.1|  406|Homo sapiens pygopus homolog 2
           (Drosophila) protein.
          Length = 406

 Score = 32.3 bits (70), Expect = 2.3
 Identities = 13/32 (40%), Positives = 15/32 (46%)
 Frame = +3

Query: 396 PLPARKMGPXSPTXRSGPXLNFPXRGPXLPVP 491
           P P R+  P  P    GP  N P +GP  P P
Sbjct: 126 PQPLRRQPPPFPPNPMGPAFNMPPQGPGYPPP 157


>BC006132-1|AAH06132.2|  406|Homo sapiens pygopus homolog 2
           (Drosophila) protein.
          Length = 406

 Score = 32.3 bits (70), Expect = 2.3
 Identities = 13/32 (40%), Positives = 15/32 (46%)
 Frame = +3

Query: 396 PLPARKMGPXSPTXRSGPXLNFPXRGPXLPVP 491
           P P R+  P  P    GP  N P +GP  P P
Sbjct: 126 PQPLRRQPPPFPPNPMGPAFNMPPQGPGYPPP 157


>AL451085-7|CAI13244.1|  406|Homo sapiens pygopus homolog 2
           (Drosophila) protein.
          Length = 406

 Score = 32.3 bits (70), Expect = 2.3
 Identities = 13/32 (40%), Positives = 15/32 (46%)
 Frame = +3

Query: 396 PLPARKMGPXSPTXRSGPXLNFPXRGPXLPVP 491
           P P R+  P  P    GP  N P +GP  P P
Sbjct: 126 PQPLRRQPPPFPPNPMGPAFNMPPQGPGYPPP 157


>AL451085-6|CAI13243.1|  369|Homo sapiens pygopus homolog 2
           (Drosophila) protein.
          Length = 369

 Score = 32.3 bits (70), Expect = 2.3
 Identities = 13/32 (40%), Positives = 15/32 (46%)
 Frame = +3

Query: 396 PLPARKMGPXSPTXRSGPXLNFPXRGPXLPVP 491
           P P R+  P  P    GP  N P +GP  P P
Sbjct: 89  PQPLRRQPPPFPPNPMGPAFNMPPQGPGYPPP 120


>AK092389-1|BAC03877.1|  406|Homo sapiens protein ( Homo sapiens
           cDNA FLJ35070 fis, clone PLACE5000139. ).
          Length = 406

 Score = 32.3 bits (70), Expect = 2.3
 Identities = 13/32 (40%), Positives = 15/32 (46%)
 Frame = +3

Query: 396 PLPARKMGPXSPTXRSGPXLNFPXRGPXLPVP 491
           P P R+  P  P    GP  N P +GP  P P
Sbjct: 126 PQPLRRQPPPFPPNPMGPAFNMPPQGPGYPPP 157


>AF457208-1|AAL91371.1|  406|Homo sapiens pygopus 2 protein.
          Length = 406

 Score = 32.3 bits (70), Expect = 2.3
 Identities = 13/32 (40%), Positives = 15/32 (46%)
 Frame = +3

Query: 396 PLPARKMGPXSPTXRSGPXLNFPXRGPXLPVP 491
           P P R+  P  P    GP  N P +GP  P P
Sbjct: 126 PQPLRRQPPPFPPNPMGPAFNMPPQGPGYPPP 157


>AB113650-1|BAD93185.1|  100|Homo sapiens prostate collagen triple
           helix protein.
          Length = 100

 Score = 31.1 bits (67), Expect = 5.3
 Identities = 15/41 (36%), Positives = 19/41 (46%), Gaps = 1/41 (2%)
 Frame = +3

Query: 369 PXFXGRXWXPL-PARKMGPXSPTXRSGPXLNFPXRGPXLPV 488
           P   G  W P+ PA  +GP  P    GP      +GP LP+
Sbjct: 43  PRTPGSPWGPVGPASPLGPGFPIGPMGPGKPVGPKGPMLPL 83


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 107,408,534
Number of Sequences: 237096
Number of extensions: 2174462
Number of successful extensions: 2696
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 2467
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2694
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 10872716010
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)