Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP11_FL5_I10
(815 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AK127507-1|BAC87013.1| 130|Homo sapiens protein ( Homo sapiens ... 32 2.2
X89894-1|CAA61984.1| 443|Homo sapiens nuclear receptor protein. 31 3.8
S81243-1|AAB36006.1| 684|Homo sapiens CHN protein. 31 3.8
D78579-1|BAA11419.1| 626|Homo sapiens neuron derived orphan rec... 31 3.8
AL359710-3|CAI95139.1| 443|Homo sapiens nuclear receptor subfam... 31 3.8
AL359710-2|CAI95138.1| 626|Homo sapiens nuclear receptor subfam... 31 3.8
AL359710-1|CAM16648.1| 637|Homo sapiens nuclear receptor subfam... 31 3.8
AL358937-4|CAI95320.1| 626|Homo sapiens nuclear receptor subfam... 31 3.8
AL358937-3|CAM22558.1| 637|Homo sapiens nuclear receptor subfam... 31 3.8
AY946008-1|AAY23347.1| 1841|Homo sapiens peripheral clock protei... 31 6.6
D83776-1|BAA12105.1| 1516|Homo sapiens KIAA0191 protein. 30 8.7
BC131734-1|AAI31735.1| 1645|Homo sapiens zinc finger, CCHC domai... 30 8.7
AL138849-1|CAI23476.1| 1644|Homo sapiens zinc finger, CCHC domai... 30 8.7
>AK127507-1|BAC87013.1| 130|Homo sapiens protein ( Homo sapiens
cDNA FLJ45600 fis, clone BRTHA3020369. ).
Length = 130
Score = 32.3 bits (70), Expect = 2.2
Identities = 18/47 (38%), Positives = 24/47 (51%)
Frame = +3
Query: 465 SQCAGHPFILSHYYWRSRPYASSHPPLRSRLHQPDHQIPDSIHQPPQ 605
S C G PF S+ S P++S HP + +H Q P + QPPQ
Sbjct: 85 SNCIG-PFS-SYLTSVSLPHSSIHPSIHPSIHPSFIQTPSGLSQPPQ 129
>X89894-1|CAA61984.1| 443|Homo sapiens nuclear receptor protein.
Length = 443
Score = 31.5 bits (68), Expect = 3.8
Identities = 16/54 (29%), Positives = 28/54 (51%)
Frame = +1
Query: 253 FQRLYFDLTGTETESNSVTVQSLPNVSSIIKGYRDAYLVNLEAVVFPSAPSLKI 414
+ +L DL TE + + T SLP++S+ ++GY Y + V P +K+
Sbjct: 35 YTKLTMDLGSTEITATATT--SLPSISTFVEGYSSNYELKPSCVYQMQRPLIKV 86
>S81243-1|AAB36006.1| 684|Homo sapiens CHN protein.
Length = 684
Score = 31.5 bits (68), Expect = 3.8
Identities = 16/54 (29%), Positives = 28/54 (51%)
Frame = +1
Query: 253 FQRLYFDLTGTETESNSVTVQSLPNVSSIIKGYRDAYLVNLEAVVFPSAPSLKI 414
+ +L DL TE + + T SLP++S+ ++GY Y + V P +K+
Sbjct: 93 YTKLTMDLGSTEITATATT--SLPSISTFVEGYSSNYELKPSCVYQMQRPLIKV 144
>D78579-1|BAA11419.1| 626|Homo sapiens neuron derived orphan
receptor protein.
Length = 626
Score = 31.5 bits (68), Expect = 3.8
Identities = 16/54 (29%), Positives = 28/54 (51%)
Frame = +1
Query: 253 FQRLYFDLTGTETESNSVTVQSLPNVSSIIKGYRDAYLVNLEAVVFPSAPSLKI 414
+ +L DL TE + + T SLP++S+ ++GY Y + V P +K+
Sbjct: 35 YTKLTMDLGSTEITATATT--SLPSISTFVEGYSSNYELKPSCVYQMQRPLIKV 86
>AL359710-3|CAI95139.1| 443|Homo sapiens nuclear receptor subfamily
4, group A, member 3 protein.
Length = 443
Score = 31.5 bits (68), Expect = 3.8
Identities = 16/54 (29%), Positives = 28/54 (51%)
Frame = +1
Query: 253 FQRLYFDLTGTETESNSVTVQSLPNVSSIIKGYRDAYLVNLEAVVFPSAPSLKI 414
+ +L DL TE + + T SLP++S+ ++GY Y + V P +K+
Sbjct: 35 YTKLTMDLGSTEITATATT--SLPSISTFVEGYSSNYELKPSCVYQMQRPLIKV 86
>AL359710-2|CAI95138.1| 626|Homo sapiens nuclear receptor subfamily
4, group A, member 3 protein.
Length = 626
Score = 31.5 bits (68), Expect = 3.8
Identities = 16/54 (29%), Positives = 28/54 (51%)
Frame = +1
Query: 253 FQRLYFDLTGTETESNSVTVQSLPNVSSIIKGYRDAYLVNLEAVVFPSAPSLKI 414
+ +L DL TE + + T SLP++S+ ++GY Y + V P +K+
Sbjct: 35 YTKLTMDLGSTEITATATT--SLPSISTFVEGYSSNYELKPSCVYQMQRPLIKV 86
>AL359710-1|CAM16648.1| 637|Homo sapiens nuclear receptor subfamily
4, group A, member 3 protein.
Length = 637
Score = 31.5 bits (68), Expect = 3.8
Identities = 16/54 (29%), Positives = 28/54 (51%)
Frame = +1
Query: 253 FQRLYFDLTGTETESNSVTVQSLPNVSSIIKGYRDAYLVNLEAVVFPSAPSLKI 414
+ +L DL TE + + T SLP++S+ ++GY Y + V P +K+
Sbjct: 46 YTKLTMDLGSTEITATATT--SLPSISTFVEGYSSNYELKPSCVYQMQRPLIKV 97
>AL358937-4|CAI95320.1| 626|Homo sapiens nuclear receptor subfamily
4, group A, member 3 protein.
Length = 626
Score = 31.5 bits (68), Expect = 3.8
Identities = 16/54 (29%), Positives = 28/54 (51%)
Frame = +1
Query: 253 FQRLYFDLTGTETESNSVTVQSLPNVSSIIKGYRDAYLVNLEAVVFPSAPSLKI 414
+ +L DL TE + + T SLP++S+ ++GY Y + V P +K+
Sbjct: 35 YTKLTMDLGSTEITATATT--SLPSISTFVEGYSSNYELKPSCVYQMQRPLIKV 86
>AL358937-3|CAM22558.1| 637|Homo sapiens nuclear receptor subfamily
4, group A, member 3 protein.
Length = 637
Score = 31.5 bits (68), Expect = 3.8
Identities = 16/54 (29%), Positives = 28/54 (51%)
Frame = +1
Query: 253 FQRLYFDLTGTETESNSVTVQSLPNVSSIIKGYRDAYLVNLEAVVFPSAPSLKI 414
+ +L DL TE + + T SLP++S+ ++GY Y + V P +K+
Sbjct: 46 YTKLTMDLGSTEITATATT--SLPSISTFVEGYSSNYELKPSCVYQMQRPLIKV 97
>AY946008-1|AAY23347.1| 1841|Homo sapiens peripheral clock protein 2
protein.
Length = 1841
Score = 30.7 bits (66), Expect = 6.6
Identities = 22/71 (30%), Positives = 34/71 (47%)
Frame = +1
Query: 601 PRLNIHFHQSPERRYXKEFAPGLKPPLSSXAPSAYLTPSSLGMAKGGSPPYFQVNDESQA 780
PR++ H+ E K +PG K L+ A S PS LG+ P QV+ S +
Sbjct: 998 PRISPSTHEPLEMTSSKSVSPGRKGQLNDSA-STPPKPSFLGV---NESPSSQVSSSSSS 1053
Query: 781 FAPYXSSSTPY 813
+P S ++P+
Sbjct: 1054 SSPAKSHNSPH 1064
>D83776-1|BAA12105.1| 1516|Homo sapiens KIAA0191 protein.
Length = 1516
Score = 30.3 bits (65), Expect = 8.7
Identities = 21/59 (35%), Positives = 27/59 (45%), Gaps = 2/59 (3%)
Frame = +1
Query: 616 HFHQSPERRYXKEFAPGLKP--PLSSXAPSAYLTPSSLGMAKGGSPPYFQVNDESQAFA 786
+F QSP +Y GL P PL APS + + A G +P +ND S FA
Sbjct: 1347 NFPQSPPAQYSPMHNMGLLPMHPLQIPAPSWPIHGPVIHSAPGSAPSNIGLNDPSIIFA 1405
>BC131734-1|AAI31735.1| 1645|Homo sapiens zinc finger, CCHC domain
containing 11 protein.
Length = 1645
Score = 30.3 bits (65), Expect = 8.7
Identities = 21/59 (35%), Positives = 27/59 (45%), Gaps = 2/59 (3%)
Frame = +1
Query: 616 HFHQSPERRYXKEFAPGLKP--PLSSXAPSAYLTPSSLGMAKGGSPPYFQVNDESQAFA 786
+F QSP +Y GL P PL APS + + A G +P +ND S FA
Sbjct: 1476 NFPQSPPAQYSPMHNMGLLPMHPLQIPAPSWPIHGPVIHSAPGSAPSNIGLNDPSIIFA 1534
>AL138849-1|CAI23476.1| 1644|Homo sapiens zinc finger, CCHC domain
containing 11 protein.
Length = 1644
Score = 30.3 bits (65), Expect = 8.7
Identities = 21/59 (35%), Positives = 27/59 (45%), Gaps = 2/59 (3%)
Frame = +1
Query: 616 HFHQSPERRYXKEFAPGLKP--PLSSXAPSAYLTPSSLGMAKGGSPPYFQVNDESQAFA 786
+F QSP +Y GL P PL APS + + A G +P +ND S FA
Sbjct: 1475 NFPQSPPAQYSPMHNMGLLPMHPLQIPAPSWPIHGPVIHSAPGSAPSNIGLNDPSIIFA 1533
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.315 0.131 0.390
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 117,487,663
Number of Sequences: 237096
Number of extensions: 2628146
Number of successful extensions: 6737
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 6208
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6725
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 10147868276
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)
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