Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP11_FL5_I02
(1371 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC890.05 |||ribosome biogenesis protein|Schizosaccharomyces po... 38 0.003
SPAPB15E9.02c |||dubious|Schizosaccharomyces pombe|chr 1|||Manual 37 0.006
SPAC23G3.06 |||U3 snoRNP protein Nop58 |Schizosaccharomyces pomb... 33 0.12
SPAC1952.02 |||ribosome biogenesis protein|Schizosaccharomyces p... 32 0.21
SPAC17A2.10c |||sequence orphan|Schizosaccharomyces pombe|chr 1|... 31 0.28
SPAC29A4.04c |||pseudouridylate synthase |Schizosaccharomyces po... 31 0.28
SPBC947.07 |||ribosome biogenesis protein Rrp14-C|Schizosaccharo... 31 0.28
SPAC29E6.10c ||SPAC30.14c|kinetochore protein |Schizosaccharomyc... 31 0.37
SPBC646.10c |||U3 snoRNP protein Nop56 |Schizosaccharomyces pomb... 29 1.1
SPBC713.07c |||vacuolar polyphosphatase |Schizosaccharomyces pom... 28 3.5
SPCC825.01 |||ribosome biogenesis ATPase, Arb family |Schizosacc... 28 3.5
SPAC10F6.10 |||protein kinase, RIO family |Schizosaccharomyces p... 27 8.0
SPBC17D1.06 |dbp3||ATP-dependent RNA helicase Dbp3 |Schizosaccha... 27 8.0
>SPAC890.05 |||ribosome biogenesis protein|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 284
Score = 37.9 bits (84), Expect = 0.003
Identities = 22/64 (34%), Positives = 29/64 (45%)
Frame = +2
Query: 980 KKKKKKXXXKKKKKXXXXXXXKKKKKXXXXXXXKKKKKKKXXKKXXXKKKXXXXXKKKKK 1159
+K+KK KK KK KK KKK+ KK K+ KK+ K++K
Sbjct: 166 EKRKKHSSKKKSKKKTSTGSALDPKKLEKITKKKKKEHKKKDKESSSKKRKSGSSDKEEK 225
Query: 1160 KXKK 1171
K KK
Sbjct: 226 KKKK 229
Score = 36.3 bits (80), Expect = 0.010
Identities = 24/66 (36%), Positives = 29/66 (43%)
Frame = +3
Query: 660 KKKKXXXXKKKXKXXXXXXKXXKXKXXKXXKKKKKXXKKXXKKXXXXXXKKKKKKXXXXK 839
K+KK KK K K K KKKKK KK K+ KK+K K
Sbjct: 167 KRKKHSSKKKSKKKTSTGSALDPKKLEKITKKKKKEHKKKDKE----SSSKKRKSGSSDK 222
Query: 840 KKKKKK 857
++KKKK
Sbjct: 223 EEKKKK 228
Score = 34.7 bits (76), Expect = 0.030
Identities = 25/72 (34%), Positives = 29/72 (40%)
Frame = +2
Query: 1046 KKKKXXXXXXXKKKKKKKXXKKXXXKKKXXXXXKKKKKKXKKXXXXXXXXXXKKKKKKXX 1225
K++K KK KKK KK KKKKK+ KK KK+K
Sbjct: 164 KREKRKKHSSKKKSKKKTSTGSALDPKKLEKITKKKKKEHKK----KDKESSSKKRKSGS 219
Query: 1226 XXXXXKKKKKKK 1261
KKKKK K
Sbjct: 220 SDKEEKKKKKIK 231
Score = 34.7 bits (76), Expect = 0.030
Identities = 24/69 (34%), Positives = 29/69 (42%)
Frame = +2
Query: 653 KXKKKKXXXXXKKXXKXXXXXKXXKXKXXXKXXKKKKKXXKXXKKXXXXXXXKKKKKKXX 832
K +K+K KK K K K KKKK K KK KK+K
Sbjct: 164 KREKRKKHSSKKKSKKKTSTGSALDPKKLEKITKKKK---KEHKKKDKESSSKKRKSGSS 220
Query: 833 XKKKKKKKK 859
K++KKKKK
Sbjct: 221 DKEEKKKKK 229
Score = 33.5 bits (73), Expect = 0.070
Identities = 24/81 (29%), Positives = 32/81 (39%)
Frame = +3
Query: 660 KKKKXXXXKKKXKXXXXXXKXXKXKXXKXXKKKKKXXKKXXKKXXXXXXKKKKKKXXXXK 839
+K+K KKK K K + KKKK K+ KK KK+K +
Sbjct: 166 EKRKKHSSKKKSKKKTSTGSALDPKKLEKITKKKK--KEHKKKDKESSSKKRKSGSSDKE 223
Query: 840 KKKKKKXXXXXKKXXXKKXKK 902
+KKKKK K +K
Sbjct: 224 EKKKKKIKLKDKPESTSSVEK 244
Score = 33.1 bits (72), Expect = 0.092
Identities = 23/65 (35%), Positives = 27/65 (41%), Gaps = 2/65 (3%)
Frame = +3
Query: 981 KKKKKKXXXKKKKKXXXXXXKKKKKKXXXXXXXKKKKKKKXKKXXXXKKXXXXXXK--KK 1154
K+KK K KKK KK KK+ KKK K+ K+ K KK
Sbjct: 167 KRKKHSSKKKSKKKTSTGSALDPKKLEKITKKKKKEHKKKDKESSSKKRKSGSSDKEEKK 226
Query: 1155 KKKXK 1169
KKK K
Sbjct: 227 KKKIK 231
Score = 32.7 bits (71), Expect = 0.12
Identities = 22/69 (31%), Positives = 25/69 (36%)
Frame = +2
Query: 1145 KKKKKKXKKXXXXXXXXXXKKKKKKXXXXXXXKKKKKKKKXXXXXXKKKKKXXXXXXXKK 1324
K+KK KK KK KKK+ KKK KK+K KK
Sbjct: 167 KRKKHSSKKKSKKKTSTGSALDPKKLEKITKKKKKEHKKKDKESSSKKRKSGSSDKEEKK 226
Query: 1325 KKXXXKKKK 1351
KK K K
Sbjct: 227 KKKIKLKDK 235
Score = 32.3 bits (70), Expect = 0.16
Identities = 26/67 (38%), Positives = 27/67 (40%), Gaps = 5/67 (7%)
Frame = +1
Query: 403 KXXKXXKXXXKKKXKKKKXKX-----KXXXKXXKXXKXKXXKKKKKKKXXKXXKKXKXXK 567
K K K KKK KKK K K K K K KKK K+ K K K
Sbjct: 164 KREKRKKHSSKKKSKKKTSTGSALDPKKLEKITKKKK-KEHKKKDKESSSKKRKSGSSDK 222
Query: 568 XXKKKKK 588
KKKKK
Sbjct: 223 EEKKKKK 229
Score = 31.9 bits (69), Expect = 0.21
Identities = 23/73 (31%), Positives = 30/73 (41%)
Frame = +2
Query: 1079 KKKKKKKXXKKXXXKKKXXXXXKKKKKKXKKXXXXXXXXXXKKKKKKXXXXXXXKKKKKK 1258
K++K+KK K KKK KK +K KKKKK+ KK+
Sbjct: 164 KREKRKKHSSKKKSKKKTSTGSALDPKKLEK--------ITKKKKKEHKKKDKESSSKKR 215
Query: 1259 KKXXXXXXKKKKK 1297
K +KKKK
Sbjct: 216 KSGSSDKEEKKKK 228
Score = 31.9 bits (69), Expect = 0.21
Identities = 17/43 (39%), Positives = 21/43 (48%)
Frame = +3
Query: 1242 KKKKKKKKXXXXXXKKKKKXXXXXXXKKKKXXXKKKKKXXKKK 1370
K++K+KK KKK KK + KKKKK KKK
Sbjct: 164 KREKRKKHSSKKKSKKKTSTGSALDPKKLEKITKKKKKEHKKK 206
Score = 31.5 bits (68), Expect = 0.28
Identities = 24/70 (34%), Positives = 27/70 (38%)
Frame = +1
Query: 1144 KKKKKKKXKXXXXXXXXXXKKKKKKXXXXXXXKKKKKKKKXXXXXXXKKKKXXXXXXXXK 1323
K KKK K KK +K KKKK+ KK KK+K K
Sbjct: 170 KHSSKKKSKKKTSTGSALDPKKLEKITK----KKKKEHKKKDKESSSKKRKSGSSDKEEK 225
Query: 1324 KKKXXKKKKK 1353
KKK K K K
Sbjct: 226 KKKKIKLKDK 235
Score = 31.1 bits (67), Expect = 0.37
Identities = 19/53 (35%), Positives = 22/53 (41%)
Frame = +3
Query: 741 KXXKKKKKXXKKXXKKXXXXXXKKKKKKXXXXKKKKKKKXXXXXKKXXXKKXK 899
K K+KK KK KK KK KKKKK+ K+ KK K
Sbjct: 164 KREKRKKHSSKKKSKKKTSTGSALDPKKLEKITKKKKKEHKKKDKESSSKKRK 216
Score = 31.1 bits (67), Expect = 0.37
Identities = 21/71 (29%), Positives = 27/71 (38%)
Frame = +1
Query: 433 KKKXKKKKXKXKXXXKXXKXXKXKXXKKKKKKKXXKXXKKXKXXKXXKKKKKXXXXXKKX 612
++K KK K K K K +K K K K K + KK+K K+
Sbjct: 165 REKRKKHSSKKKSKKKTSTGSALDPKKLEKITKKKKKEHKKKDKESSSKKRKSGSSDKEE 224
Query: 613 XKKKXXXKKXK 645
KKK K K
Sbjct: 225 KKKKKIKLKDK 235
Score = 29.5 bits (63), Expect = 1.1
Identities = 22/70 (31%), Positives = 27/70 (38%)
Frame = +2
Query: 1007 KKKKKXXXXXXXKKKKKXXXXXXXKKKKKKKXXKKXXXKKKXXXXXKKKKKKXKKXXXXX 1186
K++K+ K KKK KK +K K KKK K K+ KK
Sbjct: 164 KREKRKKHSSKKKSKKKTSTGSALDPKKLEKITK----KKKKEHKKKDKESSSKKRKSGS 219
Query: 1187 XXXXXKKKKK 1216
KKKKK
Sbjct: 220 SDKEEKKKKK 229
Score = 29.5 bits (63), Expect = 1.1
Identities = 23/96 (23%), Positives = 31/96 (32%)
Frame = +2
Query: 1007 KKKKKXXXXXXXKKKKKXXXXXXXKKKKKKKXXKKXXXKKKXXXXXKKKKKKXKKXXXXX 1186
+K+KK KKK KK +K KK KKK KK+K
Sbjct: 166 EKRKKHSSKKKSKKKTSTGSALDPKKLEKITKKKKKEHKKKDKESSSKKRKSGSSDKEEK 225
Query: 1187 XXXXXKKKKKKXXXXXXXKKKKKKKKXXXXXXKKKK 1294
K K K K K+ + ++K
Sbjct: 226 KKKKIKLKDKPESTSSVEKVKEGNRPASIHFHTRRK 261
Score = 29.5 bits (63), Expect = 1.1
Identities = 18/56 (32%), Positives = 23/56 (41%)
Frame = +2
Query: 1202 KKKKKKXXXXXXXKKKKKKKKXXXXXXKKKKKXXXXXXXKKKKXXXKKKKKXXKKK 1369
KKK KK KK +K K+ KK KK+K K++ KKK
Sbjct: 174 KKKSKKKTSTGSALDPKKLEKITKKKKKEHKKKDKESSSKKRKSGSSDKEEKKKKK 229
Score = 29.1 bits (62), Expect = 1.5
Identities = 16/43 (37%), Positives = 20/43 (46%)
Frame = +1
Query: 1243 KKKKKKKXXXXXXXKKKKXXXXXXXXKKKKXXKKKKKXXXKKK 1371
K++K+KK KKK KK + KKKK KKK
Sbjct: 164 KREKRKKHSSKKKSKKKTSTGSALDPKKLEKITKKKKKEHKKK 206
Score = 29.1 bits (62), Expect = 1.5
Identities = 21/66 (31%), Positives = 25/66 (37%), Gaps = 4/66 (6%)
Frame = +1
Query: 715 KKXKKXKXXKXXKKKKKXXKXXXKKXXXXXXKKK----KKKXXXXKKKKKKKXXXXKKKX 882
+K KK K KKK K KKK KKK KK+K K++
Sbjct: 166 EKRKKHSSKKKSKKKTSTGSALDPKKLEKITKKKKKEHKKKDKESSSKKRKSGSSDKEEK 225
Query: 883 XKKXXK 900
KK K
Sbjct: 226 KKKKIK 231
Score = 28.7 bits (61), Expect = 2.0
Identities = 22/79 (27%), Positives = 24/79 (30%)
Frame = +2
Query: 548 KKXXKXKXKKKKKKXXXXXKXXXKKXXXXKXXKKXKXKKKKXXXXXKKXXKXXXXXKXXK 727
+K K KKK KK K KK K KKK K K K K
Sbjct: 166 EKRKKHSSKKKSKKKTSTGSALDPKKLEKITKKKKKEHKKKDKESSSKKRKSGSSDKEEK 225
Query: 728 XKXXXKXXKKKKKXXKXXK 784
K K K + K
Sbjct: 226 KKKKIKLKDKPESTSSVEK 244
Score = 27.9 bits (59), Expect = 3.5
Identities = 21/74 (28%), Positives = 28/74 (37%)
Frame = +1
Query: 367 KXKXKKXXXXXXKXXKXXKXXXKKKXKKKKXKXKXXXKXXKXXKXKXXKKKKKKKXXKXX 546
K KK K + KKK K+ K K K K K++KKKK K
Sbjct: 175 KKSKKKTSTGSALDPKKLEKITKKKKKEHKKKDK-ESSSKKRKSGSSDKEEKKKKKIKLK 233
Query: 547 KKXKXXKXXKKKKK 588
K + +K K+
Sbjct: 234 DKPESTSSVEKVKE 247
Score = 27.9 bits (59), Expect = 3.5
Identities = 18/40 (45%), Positives = 19/40 (47%)
Frame = +3
Query: 987 KKKKXXXKKKKKXXXXXXKKKKKKXXXXXXXKKKKKKKXK 1106
KKKK KKK K KK+K KKKKK K K
Sbjct: 197 KKKKKEHKKKDKESS---SKKRKSGSSDKEEKKKKKIKLK 233
Score = 27.5 bits (58), Expect = 4.6
Identities = 24/87 (27%), Positives = 29/87 (33%)
Frame = +1
Query: 619 KKXXXKKXKKXXXXKKKXXXXXKKXXKXXXXXKKXKKXKXXKXXKKKKKXXKXXXKKXXX 798
K+ KK KKK K K KK K KKK K +K
Sbjct: 164 KREKRKKHSSKKKSKKKTSTGSALDPKKLEKITKKKK----KEHKKKDKESSSKKRKSGS 219
Query: 799 XXXKKKKKKXXXXKKKKKKKXXXXKKK 879
++KKKK K K + K K
Sbjct: 220 SDKEEKKKKKIKLKDKPESTSSVEKVK 246
Score = 27.5 bits (58), Expect = 4.6
Identities = 24/72 (33%), Positives = 25/72 (34%)
Frame = +1
Query: 433 KKKXKKKKXKXKXXXKXXKXXKXKXXKKKKKKKXXKXXKKXKXXKXXKKKKKXXXXXKKX 612
KK KKK K K K KKKKK K K K KK+ K
Sbjct: 169 KKHSSKKKSKKKTSTGSALDPKKLEKITKKKKKEHK-----KKDKESSSKKRKSGSSDKE 223
Query: 613 XKKKXXXKKXKK 648
KKK K K
Sbjct: 224 EKKKKKIKLKDK 235
Score = 27.1 bits (57), Expect = 6.1
Identities = 23/75 (30%), Positives = 26/75 (34%)
Frame = +2
Query: 887 KKXKKKXXXXXKKXXXXXXXXXXXXXXXXXXKKKKKKXXXKKKKKXXXXXXXKKKKKXXX 1066
K+ K+K KK KKKK KKK K KK+K
Sbjct: 164 KREKRKKHSSKKKSKKKTSTGSALDPKKLEKITKKKKKEHKKKDKESSS---KKRKSGSS 220
Query: 1067 XXXXKKKKKKKXXKK 1111
KKKKK K K
Sbjct: 221 DKEEKKKKKIKLKDK 235
Score = 26.6 bits (56), Expect = 8.0
Identities = 21/84 (25%), Positives = 25/84 (29%)
Frame = +1
Query: 478 KXXKXXKXKXXKKKKKKKXXKXXKKXKXXKXXKKKKKXXXXXKKXXKKKXXXKKXKKXXX 657
K K K KK KKK K + KKKK K K
Sbjct: 164 KREKRKKHSSKKKSKKKTSTGSALDPKKLEKITKKKKKEHKKKDKESSSKKRKSGSSDKE 223
Query: 658 XKKKXXXXXKKXXKXXXXXKKXKK 729
KKK K + +K K+
Sbjct: 224 EKKKKKIKLKDKPESTSSVEKVKE 247
Score = 26.6 bits (56), Expect = 8.0
Identities = 21/84 (25%), Positives = 28/84 (33%)
Frame = +1
Query: 514 KKKKKKXXKXXKKXKXXKXXKKKKKXXXXXKKXXKKKXXXKKXKKXXXXKKKXXXXXKKX 693
K++K+K KK K K KKK KK K KK+ K
Sbjct: 164 KREKRKKHSSKKKSKKKTSTGSALDPKKLEKITKKKKKEHKKKDKESSSKKRKSGSSDKE 223
Query: 694 XKXXXXXKKXKKXKXXKXXKKKKK 765
K K K + +K K+
Sbjct: 224 EKKKKKIKLKDKPESTSSVEKVKE 247
Score = 26.6 bits (56), Expect = 8.0
Identities = 17/53 (32%), Positives = 20/53 (37%)
Frame = +1
Query: 742 KXXKKKKKXXKXXXKKXXXXXXKKKKKKXXXXKKKKKKKXXXXKKKXXKKXXK 900
K K+KK K KK KK KKKKK+ K+ K K
Sbjct: 164 KREKRKKHSSKKKSKKKTSTGSALDPKKLEKITKKKKKEHKKKDKESSSKKRK 216
Score = 26.6 bits (56), Expect = 8.0
Identities = 18/43 (41%), Positives = 18/43 (41%)
Frame = +1
Query: 1243 KKKKKKKXXXXXXXKKKKXXXXXXXXKKKKXXKKKKKXXXKKK 1371
KKK KKK KK KKKK KKK K KK
Sbjct: 174 KKKSKKKTSTGSALDPKK--LEKITKKKKKEHKKKDKESSSKK 214
>SPAPB15E9.02c |||dubious|Schizosaccharomyces pombe|chr 1|||Manual
Length = 188
Score = 37.1 bits (82), Expect = 0.006
Identities = 21/62 (33%), Positives = 24/62 (38%)
Frame = -3
Query: 1264 FFFFFFFFXXXXXXXFFFFFFXXXXXXXXXXFFXFFFFFFXXXXXFFFXXXFFXXFFFFF 1085
++FFFFFF F F FF FFF+F F F F F F
Sbjct: 76 YWFFFFFFFFSHCRRFHIAIFIHPYDSNVVPFFCFFFYF----SLFSFFSFLFTSLHFNF 131
Query: 1084 FF 1079
FF
Sbjct: 132 FF 133
Score = 36.3 bits (80), Expect = 0.010
Identities = 37/137 (27%), Positives = 38/137 (27%), Gaps = 3/137 (2%)
Frame = -3
Query: 1210 FFFXXXXXXXXXXFFXFFF---FFFXXXXXFFFXXXFFXXFFFFFFFXXXXXXXFFFFFX 1040
FFF FF FF FFF F F F F +
Sbjct: 5 FFFASLFSSFESLFFRLFFVCSFFFPLLYSFIFATLHAFVFLFSHTLVSSQFRRLKLPYH 64
Query: 1039 XXXXXXFFFFFXXXFFFFFFXXXXXXXXXXXXXXXFXXFFXXXXXFFFXFFXXFFFXXXX 860
FF FFFFFF F FF FFF
Sbjct: 65 HHHTFTIEAFFYWFFFFFFFFSHCRRFHIAI-------FIHPYDSNVVPFFC-FFFYFSL 116
Query: 859 FFFFFFFFXXXFFFFFF 809
F FF F F F FFF
Sbjct: 117 FSFFSFLFTSLHFNFFF 133
Score = 36.3 bits (80), Expect = 0.010
Identities = 30/116 (25%), Positives = 32/116 (27%), Gaps = 5/116 (4%)
Frame = -3
Query: 880 FFFXXXXFFFFFFFFXXXFFFFFFXXXXXXXFFXXFXXFFFFFXXFXXXFXFXXFXXXXX 701
FFF F FF F FF F F F F F
Sbjct: 5 FFFASLFSSFESLFFRLFFVCSFFFPLLYSFIFATLHAFVFLFSHTLVSSQFRRLKLPYH 64
Query: 700 FXXFFXXXXXFFFFXFXFFXXFXXXXFFXXXFXXXXX-----FFFFFFXFXFXXFF 548
F F++F F FF F F FF FFF F FF
Sbjct: 65 HHHTFTIEAFFYWFFFFFFFFSHCRRFHIAIFIHPYDSNVVPFFCFFFYFSLFSFF 120
Score = 34.7 bits (76), Expect = 0.030
Identities = 36/142 (25%), Positives = 38/142 (26%)
Frame = -2
Query: 1109 FFXFFFFFFFXXXXXXXFFFFFFXXXXXXFFFFFXXXFFFFFFXXXXXXXXXXXXXXXFX 930
FF F F F FF F F F F F
Sbjct: 6 FFASLFSSFESLFFRLFFVCSFFFPLLYSFIFATLHAFVFLFSHTLVSSQFRRLKLPYHH 65
Query: 929 XXFFXXXXXFFXFFXXXFFXXXXXFFFFFFFXXXXFFFFFFXXXXXXFFXXFFXXFFFFF 750
F F+ FF FFFFFF F F FF FF+
Sbjct: 66 HHTFTIEAFFYWFF----------FFFFFFSHCRRFHIAIFIHPYDSNVVPFFCFFFY-- 113
Query: 749 XXFXXFXFXXFXXXXXXFXFFF 684
F F F F F FFF
Sbjct: 114 --FSLFSFFSFLFTSLHFNFFF 133
Score = 33.9 bits (74), Expect = 0.053
Identities = 33/129 (25%), Positives = 35/129 (27%), Gaps = 1/129 (0%)
Frame = -1
Query: 762 FFFFXXFXXFXFFXFFXXXXXFXXFFXXXXXFFFXXXXFFXFFXXXFFFXXFFXXXXXFF 583
FFF F F FF FF F F F F F +
Sbjct: 5 FFFASLFSSFESL-FFRLFFVCSFFFPLLYSFIFATLHAFVFLFSHTLVSSQFRRLKLPY 63
Query: 582 FFFXXFXXFXFFXXFXXFFFFF-FFXXFXFXXFXXFXXXFXFXFFFFXFFFXXXFXXFXX 406
F FF F FFFFF F F FF F F+F
Sbjct: 64 HHHHTFTIEAFFYWFFFFFFFFSHCRRFHIAIFIHPYDSNVVPFFCFFFYFSLFSFFSFL 123
Query: 405 FXXXXXXFF 379
F FF
Sbjct: 124 FTSLHFNFF 132
Score = 33.5 bits (73), Expect = 0.070
Identities = 31/130 (23%), Positives = 35/130 (26%)
Frame = -3
Query: 1369 FFFXXFFFFFXXXFFFFXXXXXXXFFFFFXXXXXXFFFFFFFFXXXXXXXFFFFFFXXXX 1190
FFF F F FF F + F F F F
Sbjct: 5 FFFASLFSSFESLFFRLFFVCSFFFPLLYSFIFATLHAFVFLFSHTLVSSQFRRLKLPYH 64
Query: 1189 XXXXXXFFXFFFFFFXXXXXFFFXXXFFXXFFFFFFFXXXXXXXFFFFFXXXXXXXFFFF 1010
FF++FF FF F F + F FFF F F
Sbjct: 65 HHHTFTIEAFFYWFF-FFFFFFSHCRRFHIAIFIHPYDSNVVPFFCFFFYFSLFSFFSFL 123
Query: 1009 FXXXFFFFFF 980
F F FFF
Sbjct: 124 FTSLHFNFFF 133
Score = 29.9 bits (64), Expect = 0.86
Identities = 29/128 (22%), Positives = 31/128 (24%), Gaps = 3/128 (2%)
Frame = -3
Query: 670 FFFFXFXFFXXFXXXXFFXXXFXXXXXFFFFFFXFXFXXFFXXFXXXXXXXXXXXXXXFX 491
FF F F FF F + F F F
Sbjct: 6 FFASLFSSFESLFFRLFFVCSFFFPLLYSFIFATLHAFVFLFSHTLVSSQFRRLKLPYHH 65
Query: 490 XXXF-FXXFXFXFFFFXFFFXXXXXXXXXFF--XXXXXXFXFXXFXXXFXFXXFXXFFFX 320
F F + FFFF FFF F F F F F F F
Sbjct: 66 HHTFTIEAFFYWFFFFFFFFSHCRRFHIAIFIHPYDSNVVPFFCFFFYFSLFSFFSFLFT 125
Query: 319 XXXXXFFF 296
FFF
Sbjct: 126 SLHFNFFF 133
Score = 29.5 bits (63), Expect = 1.1
Identities = 16/51 (31%), Positives = 17/51 (33%)
Frame = -3
Query: 877 FFXXXXFFFFFFFFXXXFFFFFFXXXXXXXFFXXFXXFFFFFXXFXXXFXF 725
FF FFFFFF F F F FF+F F F
Sbjct: 74 FFYWFFFFFFFFSHCRRFHIAIFIHPYDSNVVPFFCFFFYFSLFSFFSFLF 124
Score = 29.1 bits (62), Expect = 1.5
Identities = 33/130 (25%), Positives = 34/130 (26%), Gaps = 7/130 (5%)
Frame = -1
Query: 879 FFFXXXXFFFFFFFXXXXFFFFFFXXXXXXFFXXXFXXFFFFFXX------FXXFXFFXF 718
FFF F F F FF F F F F F
Sbjct: 5 FFFASLFSSFESLFFRLFFVCSFFFPLLYSFIFATLHAFVFLFSHTLVSSQFRRLKLPYH 64
Query: 717 FXXXXXFXXFFXXXXXFFFXXXXFFXFFXXXFFFXXFFXXXXXFFFFFXXFXXFXFF-XX 541
FF FFF F F + FF FF F F FF
Sbjct: 65 HHHTFTIEAFFYWFF-FFFFFFSHCRRFHIAIFIHPYDSNVVPFFCFFFYFSLFSFFSFL 123
Query: 540 FXXFFFFFFF 511
F F FFF
Sbjct: 124 FTSLHFNFFF 133
Score = 29.1 bits (62), Expect = 1.5
Identities = 30/131 (22%), Positives = 33/131 (25%), Gaps = 2/131 (1%)
Frame = -1
Query: 531 FFFFFFFXXFXFXXFXXFXXXFXFXFFFFXFFFXXX--FXXFXXFXXXXXXFFXFXFXXX 358
FFF F F F F F + F F F F
Sbjct: 5 FFFASLFSSFESLFFRLFFVCSFFFPLLYSFIFATLHAFVFLFSHTLVSSQFRRLKLPYH 64
Query: 357 XXXXFXXXFFFFXXXFXXFFFXFXFXFXXXFXXFXFXXXFXXFFXXXXFFXFFFXXXXXF 178
F FF+ F FFF F + FF FF F F
Sbjct: 65 HHHTFTIEAFFYWFFFFFFFFSHCRRFHIAIFIHPYDSNVVPFF--CFFFYFSLFSFFSF 122
Query: 177 XFFXXXXFFFF 145
F FFF
Sbjct: 123 LFTSLHFNFFF 133
>SPAC23G3.06 |||U3 snoRNP protein Nop58 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 508
Score = 32.7 bits (71), Expect = 0.12
Identities = 18/51 (35%), Positives = 24/51 (47%)
Frame = +2
Query: 752 KKKKKXXKXXKKXXXXXXXKKKKKKXXXKKKKKKKKXXXXKKKXXKKXKKK 904
+KKKK K+ K+KK+K K KK K+K + K KKK
Sbjct: 452 EKKKKKSSKLKEADGESSKKEKKEKKDKKHKKSKRKSEESEDGESPKKKKK 502
Score = 31.5 bits (68), Expect = 0.28
Identities = 17/51 (33%), Positives = 23/51 (45%)
Frame = +2
Query: 1145 KKKKKKXKKXXXXXXXXXXKKKKKKXXXXXXXKKKKKKKKXXXXXXKKKKK 1297
+KKKKK K K+KK+K K+K ++ KKKKK
Sbjct: 452 EKKKKKSSKLKEADGESSKKEKKEKKDKKHKKSKRKSEESEDGESPKKKKK 502
Score = 30.3 bits (65), Expect = 0.65
Identities = 21/62 (33%), Positives = 27/62 (43%)
Frame = +3
Query: 987 KKKKXXXKKKKKXXXXXXKKKKKKXXXXXXXKKKKKKKXKKXXXXKKXXXXXXKKKKKKX 1166
+KKK K K+ KK+KK+ K KK KK K+ + KKKK K
Sbjct: 452 EKKKKKSSKLKEADGESSKKEKKE------KKDKKHKKSKRKSEESEDGESPKKKKKSKK 505
Query: 1167 KK 1172
K
Sbjct: 506 SK 507
Score = 30.3 bits (65), Expect = 0.65
Identities = 21/62 (33%), Positives = 27/62 (43%)
Frame = +2
Query: 1079 KKKKKKKXXKKXXXKKKXXXXXKKKKKKXKKXXXXXXXXXXKKKKKKXXXXXXXKKKKKK 1258
KKKKK K+ + +KK KK KK K+K ++ KKKKK
Sbjct: 453 KKKKKSSKLKEADGESSKKEKKEKKDKKHKKS---------KRKSEESEDGESPKKKKKS 503
Query: 1259 KK 1264
KK
Sbjct: 504 KK 505
Score = 29.5 bits (63), Expect = 1.1
Identities = 17/51 (33%), Positives = 22/51 (43%)
Frame = +3
Query: 750 KKKKKXXKKXXKKXXXXXXKKKKKKXXXXKKKKKKKXXXXXKKXXXKKXKK 902
+KKKK K + K+KK+K KK K+K KK KK
Sbjct: 452 EKKKKKSSKLKEADGESSKKEKKEKKDKKHKKSKRKSEESEDGESPKKKKK 502
Score = 29.1 bits (62), Expect = 1.5
Identities = 23/63 (36%), Positives = 28/63 (44%)
Frame = +2
Query: 980 KKKKKKXXXKKKKKXXXXXXXKKKKKXXXXXXXKKKKKKKXXKKXXXKKKXXXXXKKKKK 1159
+KKKKK K K KK+KK KK KK K K+ + + KKKKK
Sbjct: 452 EKKKKK---SSKLKEADGESSKKEKK------EKKDKKHKKSKRKSEESEDGESPKKKKK 502
Query: 1160 KXK 1168
K
Sbjct: 503 SKK 505
Score = 29.1 bits (62), Expect = 1.5
Identities = 18/52 (34%), Positives = 24/52 (46%), Gaps = 1/52 (1%)
Frame = +2
Query: 752 KKKKKXXKXXKKXXXXXXXKKKKKK-XXXKKKKKKKKXXXXKKKXXKKXKKK 904
KKKKK K + +KK+KK KK K+K + + KK K K
Sbjct: 453 KKKKKSSKLKEADGESSKKEKKEKKDKKHKKSKRKSEESEDGESPKKKKKSK 504
Score = 29.1 bits (62), Expect = 1.5
Identities = 17/51 (33%), Positives = 20/51 (39%)
Frame = +1
Query: 1201 KKKKKKXXXXXXXKKKKKKKKXXXXXXXKKKKXXXXXXXXKKKKXXKKKKK 1353
K K K KK+KK+KK K+K KKK KK K
Sbjct: 457 KSSKLKEADGESSKKEKKEKKDKKHKKSKRKSEESEDGESPKKKKKSKKSK 507
Score = 26.6 bits (56), Expect = 8.0
Identities = 18/52 (34%), Positives = 22/52 (42%)
Frame = +1
Query: 433 KKKXKKKKXKXKXXXKXXKXXKXKXXKKKKKKKXXKXXKKXKXXKXXKKKKK 588
KKK K K K K K K K KK K+ + + + K KK KK
Sbjct: 455 KKKSSKLKEADGESSKKEKKEK-KDKKHKKSKRKSEESEDGESPKKKKKSKK 505
>SPAC1952.02 |||ribosome biogenesis protein|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 202
Score = 31.9 bits (69), Expect = 0.21
Identities = 22/76 (28%), Positives = 27/76 (35%)
Frame = +1
Query: 1144 KKKKKKKXKXXXXXXXXXXKKKKKKXXXXXXXKKKKKKKKXXXXXXXKKKKXXXXXXXXK 1323
KK K +K KKKK+K KKK K+ K K+K+ K
Sbjct: 126 KKVKVRKTSGKESSKREKSKKKKEKKEKKDKLKKKSKRLKLDDSHTQKRKRKVRDKESKK 185
Query: 1324 KKKXXKKKKKXXXKKK 1371
K KK K K
Sbjct: 186 SSKSGLKKVSGTKKVK 201
Score = 30.7 bits (66), Expect = 0.49
Identities = 19/58 (32%), Positives = 23/58 (39%)
Frame = +2
Query: 731 KXXXKXXKKKKKXXKXXKKXXXXXXXKKKKKKXXXKKKKKKKKXXXXKKKXXKKXKKK 904
K K K KKK K KK K+ K +K+K+K KK K KK
Sbjct: 136 KESSKREKSKKKKEKKEKKDKLKKKSKRLKLDDSHTQKRKRKVRDKESKKSSKSGLKK 193
Score = 28.7 bits (61), Expect = 2.0
Identities = 19/57 (33%), Positives = 22/57 (38%)
Frame = +2
Query: 755 KKKKXXKXXKKXXXXXXXKKKKKKXXXKKKKKKKKXXXXKKKXXKKXKKKXXXXXKK 925
KK K K K KKKK+ KK K KKK K K+K K+
Sbjct: 126 KKVKVRKTSGKESSKREKSKKKKEKKEKKDKLKKKSKRLKLDDSHTQKRKRKVRDKE 182
Score = 28.7 bits (61), Expect = 2.0
Identities = 17/62 (27%), Positives = 25/62 (40%)
Frame = +3
Query: 987 KKKKXXXKKKKKXXXXXXKKKKKKXXXXXXXKKKKKKKXKKXXXXKKXXXXXXKKKKKKX 1166
K++K KK+KK KKK K+ +K+K+K + K K K
Sbjct: 140 KREKSKKKKEKKEKKDKLKKKSKRLKLDDSHTQKRKRKVRDKESKKSSKSGLKKVSGTKK 199
Query: 1167 KK 1172
K
Sbjct: 200 VK 201
Score = 27.9 bits (59), Expect = 3.5
Identities = 19/71 (26%), Positives = 25/71 (35%)
Frame = +2
Query: 1079 KKKKKKKXXKKXXXKKKXXXXXKKKKKKXKKXXXXXXXXXXKKKKKKXXXXXXXKKKKKK 1258
+K K+ K+ KKK KK K K K +K+K+K K K
Sbjct: 131 RKTSGKESSKREKSKKKKEKKEKKDKLKKKSKRLKLDDSHTQKRKRKVRDKESKKSSKSG 190
Query: 1259 KKXXXXXXKKK 1291
K K K
Sbjct: 191 LKKVSGTKKVK 201
Score = 27.5 bits (58), Expect = 4.6
Identities = 18/74 (24%), Positives = 25/74 (33%)
Frame = +2
Query: 1106 KKXXXKKKXXXXXKKKKKKXKKXXXXXXXXXXKKKKKKXXXXXXXKKKKKKKKXXXXXXK 1285
KK +K K++K KK KKK K+ +K+K+K K
Sbjct: 126 KKVKVRKTSGKESSKREKSKKKKEKKEKKDKLKKKSKRLKLDDSHTQKRKRKVRDKESKK 185
Query: 1286 KKKKXXXXXXXKKK 1327
K KK
Sbjct: 186 SSKSGLKKVSGTKK 199
Score = 27.1 bits (57), Expect = 6.1
Identities = 18/64 (28%), Positives = 23/64 (35%)
Frame = +3
Query: 981 KKKKKKXXXKKKKKXXXXXXKKKKKKXXXXXXXKKKKKKKXKKXXXXKKXXXXXXKKKKK 1160
K+ K+ KKKK+ K KKK +K+K K K KK
Sbjct: 136 KESSKREKSKKKKEKKEKKDKLKKKSKRLKLDDSHTQKRKRKVRDKESKKSSKSGLKKVS 195
Query: 1161 KXKK 1172
KK
Sbjct: 196 GTKK 199
Score = 26.6 bits (56), Expect = 8.0
Identities = 18/63 (28%), Positives = 23/63 (36%)
Frame = +3
Query: 984 KKKKKXXXKKKKKXXXXXXKKKKKKXXXXXXXKKKKKKKXKKXXXXKKXXXXXXKKKKKK 1163
KK K K+ KKKK+K KKK K+ +K K+ KK
Sbjct: 126 KKVKVRKTSGKESSKREKSKKKKEKKEKKDKLKKKSKRLKLDDSHTQKRKRKVRDKESKK 185
Query: 1164 XKK 1172
K
Sbjct: 186 SSK 188
>SPAC17A2.10c |||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 230
Score = 31.5 bits (68), Expect = 0.28
Identities = 19/63 (30%), Positives = 19/63 (30%)
Frame = -2
Query: 1169 FXFFFFFFXXXXXXFFXXXXFFXFFFFFFFXXXXXXXFFFFFFXXXXXXFFFFFXXXFFF 990
F F F F F FF FF F FF F F F F
Sbjct: 98 FPNFLHPFTGSELSLFRCLLLFFFFLLFFLSFSFSFSFLFFLSQIFIVYFSSFPILHFLF 157
Query: 989 FFF 981
FFF
Sbjct: 158 FFF 160
Score = 31.1 bits (67), Expect = 0.37
Identities = 19/57 (33%), Positives = 20/57 (35%), Gaps = 1/57 (1%)
Frame = -3
Query: 1147 FXXXXXFFFXXXFFXXFFFFFFFXXXXXXXFFFFFXXXXXXXF-FFFFXXXFFFFFF 980
F FFF FF F F F F F +F F FFFF F F
Sbjct: 113 FRCLLLFFFFLLFFLSFSFSFSFLFFLSQIFIVYFSSFPILHFLFFFFLCVCVFLSF 169
Score = 31.1 bits (67), Expect = 0.37
Identities = 16/52 (30%), Positives = 17/52 (32%)
Frame = -3
Query: 1162 FFFFFFXXXXXFFFXXXFFXXFFFFFFFXXXXXXXFFFFFXXXXXXXFFFFF 1007
FFF F F F FF F +F F FFF F F
Sbjct: 120 FFFLLFFLSFSFSFSFLFFLSQIFIVYFSSFPILHFLFFFFLCVCVFLSFLF 171
Score = 30.7 bits (66), Expect = 0.49
Identities = 19/61 (31%), Positives = 20/61 (32%)
Frame = -3
Query: 898 FXFFXXFFFXXXXFFFFFFFFXXXFFFFFFXXXXXXXFFXXFXXFFFFFXXFXXXFXFXX 719
F FFF F FF F F F FF +F F F F F F
Sbjct: 113 FRCLLLFFF----FLLFFLSFSFSFSFLFFLSQIFIVYFSSFPILHFLFFFFLCVCVFLS 168
Query: 718 F 716
F
Sbjct: 169 F 169
Score = 30.7 bits (66), Expect = 0.49
Identities = 16/53 (30%), Positives = 17/53 (32%)
Frame = -3
Query: 1369 FFFXXFFFFFXXXFFFFXXXXXXXFFFFFXXXXXXFFFFFFFFXXXXXXXFFF 1211
FFF FF F F F +F F FFFF F F
Sbjct: 119 FFFFLLFFLSFSFSFSFLFFLSQIFIVYFSSFPILHFLFFFFLCVCVFLSFLF 171
Score = 28.3 bits (60), Expect = 2.6
Identities = 17/47 (36%), Positives = 18/47 (38%)
Frame = -1
Query: 585 FFFFXXFXXFXFFXXFXXFFFFFFFXXFXFXXFXXFXXXFXFXFFFF 445
FFFF FF F F F FF F + F FFFF
Sbjct: 119 FFFF-----LLFFLSFSFSFSFLFFLSQIFIVYFSSFPILHFLFFFF 160
Score = 28.3 bits (60), Expect = 2.6
Identities = 14/41 (34%), Positives = 15/41 (36%)
Frame = -1
Query: 558 FXFFXXFXXFFFFFFFXXFXFXXFXXFXXXFXFXFFFFXFF 436
F F F F F F F F F + F F F FF
Sbjct: 120 FFFLLFFLSFSFSFSFLFFLSQIFIVYFSSFPILHFLFFFF 160
Score = 27.9 bits (59), Expect = 3.5
Identities = 15/51 (29%), Positives = 16/51 (31%)
Frame = -1
Query: 639 FFXXXFFFXXFFXXXXXFFFFFXXFXXFXFFXXFXXFFFFFFFXXFXFXXF 487
FF FF F FF F + F FFFF F F
Sbjct: 119 FFFFLLFFLSFSFSFSFLFFLSQIFIVYFSSFPILHFLFFFFLCVCVFLSF 169
Score = 27.5 bits (58), Expect = 4.6
Identities = 16/48 (33%), Positives = 16/48 (33%), Gaps = 2/48 (4%)
Frame = -3
Query: 1264 FFFFFFFFXXXXXXXFFFFFFXXXXXXXXXXF--FXFFFFFFXXXXXF 1127
FFFF FF F FF F F FFFF F
Sbjct: 119 FFFFLLFFLSFSFSFSFLFFLSQIFIVYFSSFPILHFLFFFFLCVCVF 166
Score = 27.5 bits (58), Expect = 4.6
Identities = 16/48 (33%), Positives = 16/48 (33%), Gaps = 2/48 (4%)
Frame = -1
Query: 1263 FFFFFFFFXXXXXXXFFFFFFXXXXXXXXXXFXF--FFFFFFXXXXXF 1126
FFFF FF F FF F F FFFF F
Sbjct: 119 FFFFLLFFLSFSFSFSFLFFLSQIFIVYFSSFPILHFLFFFFLCVCVF 166
Score = 27.5 bits (58), Expect = 4.6
Identities = 19/56 (33%), Positives = 20/56 (35%), Gaps = 2/56 (3%)
Frame = -2
Query: 1370 FFFXXFF--FFFXXXFFFFXXXXXXXFFFFFXXXXXXFFFFFFFFXXXXXXXXFFF 1209
FFF FF F F F FF +F F F FFFF F F
Sbjct: 120 FFFLLFFLSFSFSFSFLFFLSQIFIVYFSSFPI----LHFLFFFFLCVCVFLSFLF 171
Score = 27.1 bits (57), Expect = 6.1
Identities = 17/54 (31%), Positives = 18/54 (33%)
Frame = -1
Query: 330 FFFXXXFXXFFFXFXFXFXXXFXXFXFXXXFXXFFXXXXFFXFFFXXXXXFXFF 169
FFF F FF F F F F + F F FFF F F
Sbjct: 119 FFF---FLLFFLSFSFSFSFLFFLSQIFIVYFSSFPILHFLFFFFLCVCVFLSF 169
Score = 26.6 bits (56), Expect = 8.0
Identities = 16/55 (29%), Positives = 17/55 (30%)
Frame = -2
Query: 1214 FFFFXXXXXXXXXXFFXFFFFFFXXXXXXFFXXXXFFXFFFFFFFXXXXXXXFFF 1050
FFFF F F FF +F F FFFF F F
Sbjct: 119 FFFFLLFFLSFSFSFS--FLFFLSQIFIVYFSSFPILHFLFFFFLCVCVFLSFLF 171
>SPAC29A4.04c |||pseudouridylate synthase |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 474
Score = 31.5 bits (68), Expect = 0.28
Identities = 18/50 (36%), Positives = 28/50 (56%)
Frame = +2
Query: 755 KKKKXXKXXKKXXXXXXXKKKKKKXXXKKKKKKKKXXXXKKKXXKKXKKK 904
KK+K + +K K++K++ KK+KK+K K+K KK KKK
Sbjct: 426 KKRKSVESSEKDEDEAAKKEEKRRKKEAKKEKKEK----KEKKEKKEKKK 471
Score = 29.9 bits (64), Expect = 0.86
Identities = 16/47 (34%), Positives = 22/47 (46%)
Frame = +1
Query: 445 KKKKXKXKXXXKXXKXXKXKXXKKKKKKKXXKXXKKXKXXKXXKKKK 585
KK+K + K + ++KK+ K K KK K K KKKK
Sbjct: 426 KKRKSVESSEKDEDEAAKKEEKRRKKEAKKEKKEKKEKKEKKEKKKK 472
Score = 28.7 bits (61), Expect = 2.0
Identities = 15/46 (32%), Positives = 23/46 (50%)
Frame = +1
Query: 451 KKXKXKXXXKXXKXXKXKXXKKKKKKKXXKXXKKXKXXKXXKKKKK 588
KK K + + K +K++KK+ K K+ K K K+KKK
Sbjct: 426 KKRKSVESSEKDEDEAAKKEEKRRKKEAKKEKKEKKEKKEKKEKKK 471
Score = 28.3 bits (60), Expect = 2.6
Identities = 16/46 (34%), Positives = 20/46 (43%)
Frame = +3
Query: 687 KKXKXXXXXXKXXKXKXXKXXKKKKKXXKKXXKKXXXXXXKKKKKK 824
KK K K K K++KK KK K+ KK+KKK
Sbjct: 426 KKRKSVESSEKDEDEAAKKEEKRRKKEAKKEKKEKKEKKEKKEKKK 471
Score = 27.5 bits (58), Expect = 4.6
Identities = 12/28 (42%), Positives = 18/28 (64%)
Frame = +2
Query: 1079 KKKKKKKXXKKXXXKKKXXXXXKKKKKK 1162
++K++KK KK +KK K+KKKK
Sbjct: 445 EEKRRKKEAKKEKKEKKEKKEKKEKKKK 472
Score = 27.1 bits (57), Expect = 6.1
Identities = 14/46 (30%), Positives = 22/46 (47%)
Frame = +1
Query: 511 KKKKKKKXXKXXKKXKXXKXXKKKKKXXXXXKKXXKKKXXXKKXKK 648
KK+K + + + K K++KK KK K+K K+ KK
Sbjct: 426 KKRKSVESSEKDEDEAAKKEEKRRKKEAKKEKKEKKEKKEKKEKKK 471
Score = 27.1 bits (57), Expect = 6.1
Identities = 14/48 (29%), Positives = 22/48 (45%)
Frame = +1
Query: 445 KKKKXKXKXXXKXXKXXKXKXXKKKKKKKXXKXXKKXKXXKXXKKKKK 588
K+K + + K + +KK+ KK K K+ K K KKK +
Sbjct: 427 KRKSVESSEKDEDEAAKKEEKRRKKEAKKEKKEKKEKKEKKEKKKKSE 474
>SPBC947.07 |||ribosome biogenesis protein Rrp14-C|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 233
Score = 31.5 bits (68), Expect = 0.28
Identities = 22/96 (22%), Positives = 36/96 (37%)
Frame = +3
Query: 1083 KKKKKKXKKXXXXKKXXXXXXKKKKKKXKKXXXXXXXXXXKKKKKXXXXXXXXKKKKKKK 1262
++K++K ++ + KK K ++ K+KKK K +KK
Sbjct: 138 EEKRRKIEESDKWHRVLLQAEGKKLKDNEQLLKKSIRRKEKEKKKSSDAWKERKDNEKKA 197
Query: 1263 KXXXXXXKKKKKXXXXXXXKKKKXXXKKKKKXXKKK 1370
+++ K KK KKKK KKK
Sbjct: 198 MLMRQQRREENLKKRRESKKSKKGKAPKKKKPSKKK 233
Score = 28.3 bits (60), Expect = 2.6
Identities = 19/74 (25%), Positives = 27/74 (36%)
Frame = +1
Query: 1150 KKKKKXKXXXXXXXXXXKKKKKKXXXXXXXKKKKKKKKXXXXXXXKKKKXXXXXXXXKKK 1329
KK K + +K+KKK +K +KK +++ K K
Sbjct: 160 KKLKDNEQLLKKSIRRKEKEKKKSSDAWKERKDNEKKAMLMRQQRREENLKKRRESKKSK 219
Query: 1330 KXXKKKKKXXXKKK 1371
K KKK KKK
Sbjct: 220 KGKAPKKKKPSKKK 233
Score = 26.6 bits (56), Expect = 8.0
Identities = 21/95 (22%), Positives = 33/95 (34%)
Frame = +2
Query: 980 KKKKKKXXXKKKKKXXXXXXXKKKKKXXXXXXXKKKKKKKXXKKXXXKKKXXXXXKKKKK 1159
+K++K K + KK K ++K+K KK K +KK
Sbjct: 139 EKRRKIEESDKWHRVLLQAEGKKLKDNEQLLKKSIRRKEKEKKKSSDAWKERKDNEKKAM 198
Query: 1160 KXKKXXXXXXXXXXKKKKKKXXXXXXXKKKKKKKK 1264
++ ++ KK KKK KKK
Sbjct: 199 LMRQQRREENLKKRRESKKSKKGKAPKKKKPSKKK 233
>SPAC29E6.10c ||SPAC30.14c|kinetochore protein |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1085
Score = 31.1 bits (67), Expect = 0.37
Identities = 20/131 (15%), Positives = 54/131 (41%)
Frame = +1
Query: 511 KKKKKKKXXKXXKKXKXXKXXKKKKKXXXXXKKXXKKKXXXKKXKKXXXXKKKXXXXXKK 690
KK+ KKK K K+ + + ++ K K+ + K+ K+ ++
Sbjct: 596 KKRDKKKQLKLAKEEERQRREAERLAEQAAQKALEAKRQEEARKKREEQRLKREQEKKQQ 655
Query: 691 XXKXXXXXKKXKKXKXXKXXKKKKKXXKXXXKKXXXXXXKKKKKKXXXXKKKKKKKXXXX 870
+ +K K+ + K KK+++ ++++K+ +K+++K
Sbjct: 656 ELERQKREEKQKQKEREKKLKKQQQEADREKMAREQRLREEEEKRILEERKRREKLDKEE 715
Query: 871 KKKXXKKXXKK 903
+++ ++ +K
Sbjct: 716 EERRRRELLEK 726
Score = 30.3 bits (65), Expect = 0.65
Identities = 23/134 (17%), Positives = 58/134 (43%), Gaps = 8/134 (5%)
Frame = +1
Query: 511 KKKKKKKXXKXXKKXKXXKXXKKKKKXXXXXKKXXKKKXXXKKXKKXXXXK----KKXXX 678
+++ K+K + KK + + + KKK K+ +++ ++ + K K+
Sbjct: 577 EEENKRKQERELKKIREKEKKRDKKKQLKLAKEEERQRREAERLAEQAAQKALEAKRQEE 636
Query: 679 XXKKXXKXXXXXKKXKK----XKXXKXXKKKKKXXKXXXKKXXXXXXKKKKKKXXXXKKK 846
KK + ++ KK + + K+K+K + KK ++K + +++
Sbjct: 637 ARKKREEQRLKREQEKKQQELERQKREEKQKQKEREKKLKKQQQEADREKMAREQRLREE 696
Query: 847 KKKKXXXXKKKXXK 888
++K+ +K+ K
Sbjct: 697 EEKRILEERKRREK 710
Score = 29.5 bits (63), Expect = 1.1
Identities = 20/96 (20%), Positives = 43/96 (44%)
Frame = +2
Query: 1082 KKKKKKXXKKXXXKKKXXXXXKKKKKKXKKXXXXXXXXXXKKKKKKXXXXXXXKKKKKKK 1261
K+K+++ KK K+K KKK+ K K + ++ K++++ +
Sbjct: 581 KRKQERELKKIREKEKKRD--KKKQLKLAKEEERQRREAERLAEQAAQKALEAKRQEEAR 638
Query: 1262 KXXXXXXKKKKKXXXXXXXKKKKXXXKKKKKXXKKK 1369
K K+++ +++K K+K+K +KK
Sbjct: 639 KKREEQRLKREQEKKQQELERQKREEKQKQKEREKK 674
Score = 29.5 bits (63), Expect = 1.1
Identities = 22/156 (14%), Positives = 65/156 (41%)
Frame = +1
Query: 412 KXXKXXXKKKXKKKKXKXKXXXKXXKXXKXKXXKKKKKKKXXKXXKKXKXXKXXKKKKKX 591
K + KK+ KKK+ K + + + ++ +K + K + +KK++
Sbjct: 589 KKIREKEKKRDKKKQLKLAKEEERQRREAERLAEQAAQKAL-----EAKRQEEARKKREE 643
Query: 592 XXXXKKXXKKKXXXKKXKKXXXXKKKXXXXXKKXXKXXXXXKKXKKXKXXKXXKKKKKXX 771
++ KK+ ++ K+ K+K K + +K + + + ++K+
Sbjct: 644 QRLKREQEKKQQELERQKREEKQKQKEREKKLKKQQQEADREKMAREQRLREEEEKRILE 703
Query: 772 KXXXKKXXXXXXKKKKKKXXXXKKKKKKKXXXXKKK 879
+ ++ ++++++ K+ ++K+ + K
Sbjct: 704 ERKRREKLDKEEEERRRRELLEKESEEKERRLREAK 739
Score = 27.1 bits (57), Expect = 6.1
Identities = 16/96 (16%), Positives = 42/96 (43%)
Frame = +2
Query: 1043 KKKKKXXXXXXXKKKKKKKXXKKXXXKKKXXXXXKKKKKKXKKXXXXXXXXXXKKKKKKX 1222
K+K++ +K+KK+ K+ K+ ++ ++ ++ +++ +K
Sbjct: 581 KRKQERELKKIREKEKKRDKKKQLKLAKEEERQRREAERLAEQAAQKALEAKRQEEARKK 640
Query: 1223 XXXXXXKKKKKKKKXXXXXXKKKKKXXXXXXXKKKK 1330
K++++KK+ K+++K KK K
Sbjct: 641 REEQRLKREQEKKQQELERQKREEKQKQKEREKKLK 676
Score = 27.1 bits (57), Expect = 6.1
Identities = 20/124 (16%), Positives = 54/124 (43%)
Frame = +2
Query: 983 KKKKKXXXKKKKKXXXXXXXKKKKKXXXXXXXKKKKKKKXXKKXXXKKKXXXXXKKKKKK 1162
++K+K KKK+ +++++ +K + ++ +KK K++++
Sbjct: 592 REKEKKRDKKKQLKLAKEEERQRREAERLAEQAAQKALEAKRQEEARKKREEQRLKREQE 651
Query: 1163 XKKXXXXXXXXXXKKKKKKXXXXXXXKKKKKKKKXXXXXXKKKKKXXXXXXXKKKKXXXK 1342
K+ K+K+K+ ++KK KK+ +K + ++K+ +
Sbjct: 652 KKQQELERQKREEKQKQKE-------REKKLKKQQQEADREKMAREQRLREEEEKRILEE 704
Query: 1343 KKKK 1354
+K++
Sbjct: 705 RKRR 708
Score = 26.6 bits (56), Expect = 8.0
Identities = 17/130 (13%), Positives = 59/130 (45%)
Frame = +3
Query: 981 KKKKKKXXXKKKKKXXXXXXKKKKKKXXXXXXXKKKKKKKXKKXXXXKKXXXXXXKKKKK 1160
++ K+K + KK KK+ KK +++++++ + + K+++
Sbjct: 578 EENKRKQERELKK--IREKEKKRDKKKQLKLAKEEERQRREAERLAEQAAQKALEAKRQE 635
Query: 1161 KXKKXXXXXXXXXXKKKKKXXXXXXXXKKKKKKKKXXXXXXKKKKKXXXXXXXKKKKXXX 1340
+ +K ++KK+ ++K+K+K+ K++++ ++++
Sbjct: 636 EARKKREEQRLKREQEKKQQELERQKREEKQKQKEREKKLKKQQQEADREKMAREQRLRE 695
Query: 1341 KKKKKXXKKK 1370
+++K+ +++
Sbjct: 696 EEEKRILEER 705
>SPBC646.10c |||U3 snoRNP protein Nop56 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 497
Score = 29.5 bits (63), Expect = 1.1
Identities = 14/32 (43%), Positives = 18/32 (56%)
Frame = +2
Query: 809 KKKKKKXXXKKKKKKKKXXXXKKKXXKKXKKK 904
+KK KK K+K KKK+ + KK KKK
Sbjct: 462 EKKDKKEKKKEKSKKKRSADDASEEVKKSKKK 493
Score = 27.5 bits (58), Expect = 4.6
Identities = 15/40 (37%), Positives = 17/40 (42%)
Frame = +3
Query: 1146 KKKKKKXKKXXXXXXXXXXKKKKKXXXXXXXXKKKKKKKK 1265
+K KK KK KKK+ KK KKKKK
Sbjct: 456 EKPSKKEKKDKKEKKKEKSKKKRSADDASEEVKKSKKKKK 495
Score = 27.1 bits (57), Expect = 6.1
Identities = 17/40 (42%), Positives = 20/40 (50%)
Frame = +3
Query: 981 KKKKKKXXXKKKKKXXXXXXKKKKKKXXXXXXXKKKKKKK 1100
KK+KK KKK+K KKK+ KK KKKK
Sbjct: 460 KKEKKDKKEKKKEKS-----KKKRSADDASEEVKKSKKKK 494
Score = 26.6 bits (56), Expect = 8.0
Identities = 15/37 (40%), Positives = 16/37 (43%)
Frame = +1
Query: 715 KKXKKXKXXKXXKKKKKXXKXXXKKXXXXXXKKKKKK 825
K KK K K KKK+K K KK KKK
Sbjct: 457 KPSKKEKKDKKEKKKEKSKKKRSADDASEEVKKSKKK 493
>SPBC713.07c |||vacuolar polyphosphatase |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 577
Score = 27.9 bits (59), Expect = 3.5
Identities = 12/17 (70%), Positives = 13/17 (76%)
Frame = +2
Query: 809 KKKKKKXXXKKKKKKKK 859
KKKKKK KKKKK K+
Sbjct: 437 KKKKKKKNNKKKKKNKR 453
Score = 27.9 bits (59), Expect = 3.5
Identities = 12/17 (70%), Positives = 13/17 (76%)
Frame = +2
Query: 809 KKKKKKXXXKKKKKKKK 859
KKKKKK KKKK K+K
Sbjct: 438 KKKKKKNNKKKKKNKRK 454
Score = 27.5 bits (58), Expect = 4.6
Identities = 13/22 (59%), Positives = 13/22 (59%)
Frame = +2
Query: 809 KKKKKKXXXKKKKKKKKXXXXK 874
KKKKKK KKKKK K K
Sbjct: 436 KKKKKKKKNNKKKKKNKRKNIK 457
Score = 27.1 bits (57), Expect = 6.1
Identities = 13/22 (59%), Positives = 14/22 (63%)
Frame = +2
Query: 836 KKKKKKKKXXXXKKKXXKKXKK 901
KKKKKKKK KKK +K K
Sbjct: 436 KKKKKKKKNNKKKKKNKRKNIK 457
Score = 27.1 bits (57), Expect = 6.1
Identities = 12/15 (80%), Positives = 12/15 (80%)
Frame = +1
Query: 979 KKKKKKKXXXKKKKK 1023
KKKKKKK KKKKK
Sbjct: 436 KKKKKKKKNNKKKKK 450
Score = 26.6 bits (56), Expect = 8.0
Identities = 12/17 (70%), Positives = 12/17 (70%)
Frame = +3
Query: 807 KKKKKKXXXXKKKKKKK 857
KKKKKK KKKKK K
Sbjct: 436 KKKKKKKKNNKKKKKNK 452
>SPCC825.01 |||ribosome biogenesis ATPase, Arb family
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 822
Score = 27.9 bits (59), Expect = 3.5
Identities = 17/51 (33%), Positives = 20/51 (39%)
Frame = +2
Query: 752 KKKKKXXKXXKKXXXXXXXKKKKKKXXXKKKKKKKKXXXXKKKXXKKXKKK 904
KKKKK K + KKKKKK K K +K +KK
Sbjct: 150 KKKKKKSKSKDDGSEALDDGDIESSEKDKKKKKKSKENDDAPKKDRKTRKK 200
Score = 27.5 bits (58), Expect = 4.6
Identities = 17/56 (30%), Positives = 20/56 (35%)
Frame = +1
Query: 421 KXXXKKKXKKKKXKXKXXXKXXKXXKXKXXKKKKKKKXXKXXKKXKXXKXXKKKKK 588
K KKK K K + KKKKKK K K KK++K
Sbjct: 148 KSKKKKKKSKSKDDGSEALDDGDIESSEKDKKKKKKSKENDDAPKKDRKTRKKEEK 203
>SPAC10F6.10 |||protein kinase, RIO family |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 521
Score = 26.6 bits (56), Expect = 8.0
Identities = 15/55 (27%), Positives = 23/55 (41%)
Frame = +1
Query: 445 KKKKXKXKXXXKXXKXXKXKXXKKKKKKKXXKXXKKXKXXKXXKKKKKXXXXXKK 609
K + K + + + K +KKK K+ +K K K KK+K KK
Sbjct: 467 KSSAKQGKGNGRAKETPEEKRARKKKTKEDKAEKRKSKIPKYEKKRKLKQSGRKK 521
>SPBC17D1.06 |dbp3||ATP-dependent RNA helicase Dbp3
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 578
Score = 26.6 bits (56), Expect = 8.0
Identities = 15/42 (35%), Positives = 17/42 (40%)
Frame = +1
Query: 433 KKKXKKKKXKXKXXXKXXKXXKXKXXKKKKKKKXXKXXKKXK 558
K+K KK K + K K KK KKK K K K
Sbjct: 69 KRKEKKSKHEHKKHKKDKPSADKDRISKKDKKKSKKGKSKTK 110
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.284 0.106 0.239
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,588,905
Number of Sequences: 5004
Number of extensions: 31577
Number of successful extensions: 720
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 28
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 284
length of database: 2,362,478
effective HSP length: 75
effective length of database: 1,987,178
effective search space used: 757114818
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 18 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 45 (21.7 bits)
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