Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP11_FL5_H24
         (813 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF499232-2|AAP29639.1| 1183|Homo sapiens pol protein protein.          80   8e-15
AB037726-1|BAA92543.2| 1819|Homo sapiens KIAA1305 protein protein.     71   7e-12
AK126956-1|BAC86762.1|  179|Homo sapiens protein ( Homo sapiens ...    62   2e-09
X57147-1|CAA40437.1|  129|Homo sapiens endogenous retrovirus ERV...    35   0.40 
AF103198-1|AAD30758.1|  129|Homo sapiens immunoglobulin heavy ch...    32   2.8  
U75898-1|AAB82757.1|  182|Homo sapiens HSPB2 protein.                  30   8.7  
S67070-1|AAB28816.1|   95|Homo sapiens heat shock protein HSP72 ...    30   8.7  
D89617-1|BAA24004.1|  182|Homo sapiens MKBP protein.                   30   8.7  
CR457408-1|CAG33689.1|  182|Homo sapiens HSPB2 protein.                30   8.7  
BC109393-1|AAI09394.1|  182|Homo sapiens heat shock 27kDa protei...    30   8.7  
AY208910-1|AAO18081.1|  182|Homo sapiens heat shock 27kDa protei...    30   8.7  

>AF499232-2|AAP29639.1| 1183|Homo sapiens pol protein protein.
          Length = 1183

 Score = 80.2 bits (189), Expect = 8e-15
 Identities = 41/117 (35%), Positives = 64/117 (54%), Gaps = 2/117 (1%)
 Frame = +1

Query: 10  KAVVEFPTPSNPKDIKSFLGLVSYYRRFIPDFSKIAKPLTSLLK--KETPFNWENQQQIS 183
           + +   P P + K ++ FLG   + R +IP+F+ +AKPL  + K     PF W +QQQ +
Sbjct: 395 QVICTLPEPKSRKQVRKFLGAAGFCRLWIPNFAVLAKPLYEVTKWGDREPFEWGSQQQQA 454

Query: 184 FDLLKQKLTTAPVLAYPDFSQPFLLTCDASNHAVGSVLSQGPVGKDRPIAFASRTLN 354
           F  LK+KL +AP L  P+ ++PF L           VL+Q      RP+A+ S+ L+
Sbjct: 455 FRELKEKLMSAPALGLPNLTKPFTLYVSEREKMAVRVLTQTVGPWPRPVAYLSKQLD 511


>AB037726-1|BAA92543.2| 1819|Homo sapiens KIAA1305 protein protein.
          Length = 1819

 Score = 70.5 bits (165), Expect = 7e-12
 Identities = 36/112 (32%), Positives = 61/112 (54%)
 Frame = +1

Query: 16   VVEFPTPSNPKDIKSFLGLVSYYRRFIPDFSKIAKPLTSLLKKETPFNWENQQQISFDLL 195
            + +   PSN   +  F+G +  +R  IPD+  +  PL SLLK++  + W+ + + +F  L
Sbjct: 1003 LAQLTIPSNFTALSFFMGFMDSHRDAIPDYEALVGPLHSLLKQKPDWQWDQEHEEAFLAL 1062

Query: 196  KQKLTTAPVLAYPDFSQPFLLTCDASNHAVGSVLSQGPVGKDRPIAFASRTL 351
            K+ L +A  L  P+   PF L    S+ A+ ++L Q   G+  PIA+ S+ L
Sbjct: 1063 KRALVSALCLMAPNSQLPFRLEVTVSHVALTAILHQEHSGRKHPIAYTSKPL 1114


>AK126956-1|BAC86762.1|  179|Homo sapiens protein ( Homo sapiens
           cDNA FLJ45009 fis, clone BRAWH3012779. ).
          Length = 179

 Score = 62.1 bits (144), Expect = 2e-09
 Identities = 42/98 (42%), Positives = 54/98 (55%), Gaps = 3/98 (3%)
 Frame = +1

Query: 70  LVSYYRRFIPDFSKIAKPLTSLLKKET--PFNWENQQQISFDLLKQKLTTAPVLAYPDFS 243
           ++ Y+  +IP F+ + KPL  L K     P N ++    SF  LK  L TAP LA PD S
Sbjct: 1   MIGYFHLWIPGFAILTKPLYKLTKGNLADPINPKSFPHSSFHSLKIALETAPTLALPDSS 60

Query: 244 QPFLL-TCDASNHAVGSVLSQGPVGKDRPIAFASRTLN 354
           QPF L T      AVG +L+QGP     PIAF S+ L+
Sbjct: 61  QPFSLHTAKVQGCAVG-ILTQGP--GPCPIAFLSKQLD 95


>X57147-1|CAA40437.1|  129|Homo sapiens endogenous retrovirus ERV9
           protein.
          Length = 129

 Score = 34.7 bits (76), Expect = 0.40
 Identities = 20/65 (30%), Positives = 34/65 (52%)
 Frame = +1

Query: 160 WENQQQISFDLLKQKLTTAPVLAYPDFSQPFLLTCDASNHAVGSVLSQGPVGKDRPIAFA 339
           WE + + +F  LKQ L  AP L+ P      L   + +  A+G VL+Q      +P+A+ 
Sbjct: 27  WEPEAETTFKTLKQALVQAPALSLPTGQNFSLYVRERARIALG-VLTQTHGTTPQPVAYL 85

Query: 340 SRTLN 354
           S+ ++
Sbjct: 86  SKEID 90


>AF103198-1|AAD30758.1|  129|Homo sapiens immunoglobulin heavy chain
           variable region protein.
          Length = 129

 Score = 31.9 bits (69), Expect = 2.8
 Identities = 13/33 (39%), Positives = 21/33 (63%)
 Frame = +1

Query: 613 ALFADDTAIYYSCRKMSLLHRRLQIAVATMGQW 711
           +L A+DTA+YY  ++MS++    +I V   G W
Sbjct: 77  SLRAEDTALYYCAKEMSVVEGYEEIVVLPTGNW 109


>U75898-1|AAB82757.1|  182|Homo sapiens HSPB2 protein.
          Length = 182

 Score = 30.3 bits (65), Expect = 8.7
 Identities = 14/25 (56%), Positives = 15/25 (60%)
 Frame = -1

Query: 717 REPLSHGGYCNLESPMKQRHLPTRV 643
           R  LSH G  NLE+P   RHL T V
Sbjct: 133 RAALSHDGILNLEAPRGGRHLDTEV 157


>S67070-1|AAB28816.1|   95|Homo sapiens heat shock protein HSP72
           homolog protein.
          Length = 95

 Score = 30.3 bits (65), Expect = 8.7
 Identities = 14/25 (56%), Positives = 15/25 (60%)
 Frame = -1

Query: 717 REPLSHGGYCNLESPMKQRHLPTRV 643
           R  LSH G  NLE+P   RHL T V
Sbjct: 46  RAALSHDGILNLEAPRGGRHLDTEV 70


>D89617-1|BAA24004.1|  182|Homo sapiens MKBP protein.
          Length = 182

 Score = 30.3 bits (65), Expect = 8.7
 Identities = 14/25 (56%), Positives = 15/25 (60%)
 Frame = -1

Query: 717 REPLSHGGYCNLESPMKQRHLPTRV 643
           R  LSH G  NLE+P   RHL T V
Sbjct: 133 RAALSHDGILNLEAPRGGRHLDTEV 157


>CR457408-1|CAG33689.1|  182|Homo sapiens HSPB2 protein.
          Length = 182

 Score = 30.3 bits (65), Expect = 8.7
 Identities = 14/25 (56%), Positives = 15/25 (60%)
 Frame = -1

Query: 717 REPLSHGGYCNLESPMKQRHLPTRV 643
           R  LSH G  NLE+P   RHL T V
Sbjct: 133 RAALSHDGILNLEAPRGGRHLDTEV 157


>BC109393-1|AAI09394.1|  182|Homo sapiens heat shock 27kDa protein 2
           protein.
          Length = 182

 Score = 30.3 bits (65), Expect = 8.7
 Identities = 14/25 (56%), Positives = 15/25 (60%)
 Frame = -1

Query: 717 REPLSHGGYCNLESPMKQRHLPTRV 643
           R  LSH G  NLE+P   RHL T V
Sbjct: 133 RAALSHDGILNLEAPRGGRHLDTEV 157


>AY208910-1|AAO18081.1|  182|Homo sapiens heat shock 27kDa protein 2
           protein.
          Length = 182

 Score = 30.3 bits (65), Expect = 8.7
 Identities = 14/25 (56%), Positives = 15/25 (60%)
 Frame = -1

Query: 717 REPLSHGGYCNLESPMKQRHLPTRV 643
           R  LSH G  NLE+P   RHL T V
Sbjct: 133 RAALSHDGILNLEAPRGGRHLDTEV 157


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 122,155,578
Number of Sequences: 237096
Number of extensions: 2632730
Number of successful extensions: 20081
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 19748
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 20079
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 10092110758
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)