Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP11_FL5_H24
         (813 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ013068-1|AAY81956.1|  931|Apis mellifera dusty protein kinase ...    23   2.5  
DQ013067-1|AAY81955.1|  969|Apis mellifera dusty protein kinase ...    23   2.5  
M29489-1|AAA27724.1|  109|Apis mellifera protein ( Bee homeobox-...    22   5.9  
AB253415-1|BAE86926.1|  588|Apis mellifera alpha-glucosidase pro...    22   7.8  

>DQ013068-1|AAY81956.1|  931|Apis mellifera dusty protein kinase
           isoform B protein.
          Length = 931

 Score = 23.4 bits (48), Expect = 2.5
 Identities = 13/44 (29%), Positives = 20/44 (45%)
 Frame = +1

Query: 7   GKAVVEFPTPSNPKDIKSFLGLVSYYRRFIPDFSKIAKPLTSLL 138
           G   ++   PS+       L +  YY R IPD  +I K   S++
Sbjct: 619 GPCAIKSVVPSDESHWND-LAMEFYYNRSIPDHKRIVKLRGSII 661


>DQ013067-1|AAY81955.1|  969|Apis mellifera dusty protein kinase
           isoform A protein.
          Length = 969

 Score = 23.4 bits (48), Expect = 2.5
 Identities = 13/44 (29%), Positives = 20/44 (45%)
 Frame = +1

Query: 7   GKAVVEFPTPSNPKDIKSFLGLVSYYRRFIPDFSKIAKPLTSLL 138
           G   ++   PS+       L +  YY R IPD  +I K   S++
Sbjct: 657 GPCAIKSVVPSDESHWND-LAMEFYYNRSIPDHKRIVKLRGSII 699


>M29489-1|AAA27724.1|  109|Apis mellifera protein ( Bee
           homeobox-containing gene,partial cds, clone E60. ).
          Length = 109

 Score = 22.2 bits (45), Expect = 5.9
 Identities = 11/24 (45%), Positives = 12/24 (50%)
 Frame = -1

Query: 783 GGRPXFEEPRCAFRGLXFIRHFRE 712
           GG P  + PR AF G    R  RE
Sbjct: 15  GGTPEEKRPRTAFSGEQLARLKRE 38


>AB253415-1|BAE86926.1|  588|Apis mellifera alpha-glucosidase
           protein.
          Length = 588

 Score = 21.8 bits (44), Expect = 7.8
 Identities = 7/20 (35%), Positives = 10/20 (50%)
 Frame = +1

Query: 148 TPFNWENQQQISFDLLKQKL 207
           TPF W+N     F  + + L
Sbjct: 414 TPFQWDNSINAGFSKIAENL 433


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 233,351
Number of Sequences: 438
Number of extensions: 4881
Number of successful extensions: 11
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 25853301
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)