Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP11_FL5_H13
(764 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC111390-1|AAI11391.1| 384|Homo sapiens SRY (sex determining re... 35 0.28
BC073971-1|AAH73971.1| 384|Homo sapiens SRY (sex determining re... 35 0.28
BC038590-1|AAH38590.1| 384|Homo sapiens SRY (sex determining re... 35 0.28
AL355803-1|CAC16611.1| 384|Homo sapiens SRY (sex determining re... 35 0.28
AJ243896-1|CAB95835.1| 384|Homo sapiens SOX18 protein protein. 35 0.28
AF270652-1|AAG48577.1| 384|Homo sapiens Sry-related HMG-box pro... 35 0.28
AB033888-1|BAA94874.1| 384|Homo sapiens SOX18 protein. 35 0.28
BC057783-1|AAH57783.1| 275|Homo sapiens SFRS2B protein protein. 33 0.85
BC127948-1|AAI27949.1| 353|Homo sapiens Unknown (protein for MG... 32 2.6
BC127947-1|AAI27948.1| 271|Homo sapiens Unknown (protein for MG... 32 2.6
AJ537424-1|CAD60934.1| 455|Homo sapiens growth/differentiation ... 32 2.6
BC130390-1|AAI30391.1| 755|Homo sapiens FAM22F protein protein. 31 3.4
AL691447-4|CAI13277.1| 655|Homo sapiens family with sequence si... 31 3.4
AL158827-6|CAH72568.1| 622|Homo sapiens family with sequence si... 31 3.4
AL133071-1|CAB61394.1| 613|Homo sapiens hypothetical protein pr... 31 3.4
AY484971-2|AAR83296.1| 1751|Homo sapiens type XVIII collagen lon... 31 4.5
AF174114-1|AAD53860.1| 133|Homo sapiens immunoglobulin heavy ch... 31 4.5
Z83844-3|CAI20370.2| 701|Homo sapiens SH3-domain binding protei... 30 7.9
CR456576-1|CAG30462.1| 701|Homo sapiens SH3BP1 protein. 30 7.9
BC106053-1|AAI06054.1| 841|Homo sapiens MAP7 domain containing ... 30 7.9
BC067256-1|AAH67256.1| 678|Homo sapiens MAP7D1 protein protein. 30 7.9
BC008282-1|AAH08282.1| 621|Homo sapiens SH3BP1 protein protein. 30 7.9
AL133561-1|CAB63715.1| 580|Homo sapiens hypothetical protein pr... 30 7.9
AK126716-1|BAC86656.1| 250|Homo sapiens protein ( Homo sapiens ... 30 7.9
AF218002-1|AAG17244.1| 554|Homo sapiens unknown protein. 30 7.9
AB033013-1|BAA86501.2| 813|Homo sapiens KIAA1187 protein protein. 30 7.9
>BC111390-1|AAI11391.1| 384|Homo sapiens SRY (sex determining
region Y)-box 18 protein.
Length = 384
Score = 35.1 bits (77), Expect = 0.28
Identities = 30/97 (30%), Positives = 40/97 (41%), Gaps = 2/97 (2%)
Frame = +2
Query: 251 PQLPPWDSGSGSGASTLTPRKAQRCSSKGVALRTPR*ASLSRL--GASITPPPPFAQSRC 424
P+ P SGS L P A+ G+ L TP + L L G + PPP A C
Sbjct: 184 PEPFPAASGSARAFRELPPLGAE---FDGLGLPTPERSPLDGLEPGEAAFFPPPAAPEDC 240
Query: 425 STSPYRGPRRSNI*ASPSTVG*HSAPTSRRYATVPPS 535
+ P+R P S G + AP + T PP+
Sbjct: 241 ALRPFRAPYAPTE-LSRDPGGCYGAPLAEALRTAPPA 276
>BC073971-1|AAH73971.1| 384|Homo sapiens SRY (sex determining
region Y)-box 18 protein.
Length = 384
Score = 35.1 bits (77), Expect = 0.28
Identities = 30/97 (30%), Positives = 40/97 (41%), Gaps = 2/97 (2%)
Frame = +2
Query: 251 PQLPPWDSGSGSGASTLTPRKAQRCSSKGVALRTPR*ASLSRL--GASITPPPPFAQSRC 424
P+ P SGS L P A+ G+ L TP + L L G + PPP A C
Sbjct: 184 PEPFPAASGSARAFRELPPLGAE---FDGLGLPTPERSPLDGLEPGEAAFFPPPAAPEDC 240
Query: 425 STSPYRGPRRSNI*ASPSTVG*HSAPTSRRYATVPPS 535
+ P+R P S G + AP + T PP+
Sbjct: 241 ALRPFRAPYAPTE-LSRDPGGCYGAPLAEALRTAPPA 276
>BC038590-1|AAH38590.1| 384|Homo sapiens SRY (sex determining
region Y)-box 18 protein.
Length = 384
Score = 35.1 bits (77), Expect = 0.28
Identities = 30/97 (30%), Positives = 40/97 (41%), Gaps = 2/97 (2%)
Frame = +2
Query: 251 PQLPPWDSGSGSGASTLTPRKAQRCSSKGVALRTPR*ASLSRL--GASITPPPPFAQSRC 424
P+ P SGS L P A+ G+ L TP + L L G + PPP A C
Sbjct: 184 PEPFPAASGSARAFRELPPLGAE---FDGLGLPTPERSPLDGLEPGEAAFFPPPAAPEDC 240
Query: 425 STSPYRGPRRSNI*ASPSTVG*HSAPTSRRYATVPPS 535
+ P+R P S G + AP + T PP+
Sbjct: 241 ALRPFRAPYAPTE-LSRDPGGCYGAPLAEALRTAPPA 276
>AL355803-1|CAC16611.1| 384|Homo sapiens SRY (sex determining
region Y)-box 18 protein.
Length = 384
Score = 35.1 bits (77), Expect = 0.28
Identities = 30/97 (30%), Positives = 40/97 (41%), Gaps = 2/97 (2%)
Frame = +2
Query: 251 PQLPPWDSGSGSGASTLTPRKAQRCSSKGVALRTPR*ASLSRL--GASITPPPPFAQSRC 424
P+ P SGS L P A+ G+ L TP + L L G + PPP A C
Sbjct: 184 PEPFPAASGSARAFRELPPLGAE---FDGLGLPTPERSPLDGLEPGEAAFFPPPAAPEDC 240
Query: 425 STSPYRGPRRSNI*ASPSTVG*HSAPTSRRYATVPPS 535
+ P+R P S G + AP + T PP+
Sbjct: 241 ALRPFRAPYAPTE-LSRDPGGCYGAPLAEALRTAPPA 276
>AJ243896-1|CAB95835.1| 384|Homo sapiens SOX18 protein protein.
Length = 384
Score = 35.1 bits (77), Expect = 0.28
Identities = 30/97 (30%), Positives = 40/97 (41%), Gaps = 2/97 (2%)
Frame = +2
Query: 251 PQLPPWDSGSGSGASTLTPRKAQRCSSKGVALRTPR*ASLSRL--GASITPPPPFAQSRC 424
P+ P SGS L P A+ G+ L TP + L L G + PPP A C
Sbjct: 184 PEPFPAASGSARAFRELPPLGAE---FDGLGLPTPERSPLDGLEPGEAAFFPPPAAPEDC 240
Query: 425 STSPYRGPRRSNI*ASPSTVG*HSAPTSRRYATVPPS 535
+ P+R P S G + AP + T PP+
Sbjct: 241 ALRPFRAPYAPTE-LSRDPGGCYGAPLAEALRTAPPA 276
>AF270652-1|AAG48577.1| 384|Homo sapiens Sry-related HMG-box
protein protein.
Length = 384
Score = 35.1 bits (77), Expect = 0.28
Identities = 30/97 (30%), Positives = 40/97 (41%), Gaps = 2/97 (2%)
Frame = +2
Query: 251 PQLPPWDSGSGSGASTLTPRKAQRCSSKGVALRTPR*ASLSRL--GASITPPPPFAQSRC 424
P+ P SGS L P A+ G+ L TP + L L G + PPP A C
Sbjct: 184 PEPFPAASGSARAFRELPPLGAE---FDGLGLPTPERSPLDGLEPGEAAFFPPPAAPEDC 240
Query: 425 STSPYRGPRRSNI*ASPSTVG*HSAPTSRRYATVPPS 535
+ P+R P S G + AP + T PP+
Sbjct: 241 ALRPFRAPYAPTE-LSRDPGGCYGAPLAEALRTAPPA 276
>AB033888-1|BAA94874.1| 384|Homo sapiens SOX18 protein.
Length = 384
Score = 35.1 bits (77), Expect = 0.28
Identities = 30/97 (30%), Positives = 40/97 (41%), Gaps = 2/97 (2%)
Frame = +2
Query: 251 PQLPPWDSGSGSGASTLTPRKAQRCSSKGVALRTPR*ASLSRL--GASITPPPPFAQSRC 424
P+ P SGS L P A+ G+ L TP + L L G + PPP A C
Sbjct: 184 PEPFPAASGSARAFRELPPLGAE---FDGLGLPTPERSPLDGLEPGEAAFFPPPAAPEDC 240
Query: 425 STSPYRGPRRSNI*ASPSTVG*HSAPTSRRYATVPPS 535
+ P+R P S G + AP + T PP+
Sbjct: 241 ALRPFRAPYAPTE-LSRDPGGCYGAPLAEALRTAPPA 276
>BC057783-1|AAH57783.1| 275|Homo sapiens SFRS2B protein protein.
Length = 275
Score = 33.5 bits (73), Expect = 0.85
Identities = 22/62 (35%), Positives = 30/62 (48%), Gaps = 3/62 (4%)
Frame = +2
Query: 275 GSGSGASTLTPRKAQRCSSKGVALRTPR*ASL---SRLGASITPPPPFAQSRCSTSPYRG 445
G G G + +PR+ R S+G + R S SR G S P+++SR S SPY
Sbjct: 111 GGGYGRRSRSPRRRHRSRSRGPSCSRSRSRSRYRGSRYGRSPYSRSPYSRSRYSRSPYSR 170
Query: 446 PR 451
R
Sbjct: 171 SR 172
>BC127948-1|AAI27949.1| 353|Homo sapiens Unknown (protein for
MGC:158101) protein.
Length = 353
Score = 31.9 bits (69), Expect = 2.6
Identities = 30/89 (33%), Positives = 36/89 (40%), Gaps = 7/89 (7%)
Frame = +2
Query: 206 TTRVGRRRCFIDDFRPQLPPWDSGSGSGAST---LTPRKAQRCSSKGVALRTPR*ASLSR 376
T RV F+ F LP + S S +S+ L K R +G R PR + R
Sbjct: 3 TPRVLLSAVFLISFLWDLPGFQQASISSSSSSAELGSTKGMRSRKEGKMQRAPRDSDAGR 62
Query: 377 LGASITPPP---PFAQS-RCSTSPYRGPR 451
G P P P AQ R P RGPR
Sbjct: 63 EGQEPQPRPQDEPRAQQPRAQEPPGRGPR 91
>BC127947-1|AAI27948.1| 271|Homo sapiens Unknown (protein for
MGC:158100) protein.
Length = 271
Score = 31.9 bits (69), Expect = 2.6
Identities = 30/89 (33%), Positives = 36/89 (40%), Gaps = 7/89 (7%)
Frame = +2
Query: 206 TTRVGRRRCFIDDFRPQLPPWDSGSGSGAST---LTPRKAQRCSSKGVALRTPR*ASLSR 376
T RV F+ F LP + S S +S+ L K R +G R PR + R
Sbjct: 3 TPRVLLSAVFLISFLWDLPGFQQASISSSSSSAELGSTKGMRSRKEGKMQRAPRDSDAGR 62
Query: 377 LGASITPPP---PFAQS-RCSTSPYRGPR 451
G P P P AQ R P RGPR
Sbjct: 63 EGQEPQPRPQDEPRAQQPRAQEPPGRGPR 91
>AJ537424-1|CAD60934.1| 455|Homo sapiens growth/differentiation
factor 6 precursor protein.
Length = 455
Score = 31.9 bits (69), Expect = 2.6
Identities = 30/89 (33%), Positives = 36/89 (40%), Gaps = 7/89 (7%)
Frame = +2
Query: 206 TTRVGRRRCFIDDFRPQLPPWDSGSGSGAST---LTPRKAQRCSSKGVALRTPR*ASLSR 376
T RV F+ F LP + S S +S+ L K R +G R PR + R
Sbjct: 3 TPRVLLSAVFLISFLWDLPGFQQASISSSSSSAELGSTKGMRSRKEGKMQRAPRDSDAGR 62
Query: 377 LGASITPPP---PFAQS-RCSTSPYRGPR 451
G P P P AQ R P RGPR
Sbjct: 63 EGQEPQPRPQDEPRAQQPRAQEPPGRGPR 91
>BC130390-1|AAI30391.1| 755|Homo sapiens FAM22F protein protein.
Length = 755
Score = 31.5 bits (68), Expect = 3.4
Identities = 20/66 (30%), Positives = 30/66 (45%), Gaps = 3/66 (4%)
Frame = +1
Query: 280 RKWRIDINPTKSTAVLFKRGRPPNTTLSIPLPTRRVNNPAPAV---RPITMFDQPIPWAP 450
R WR+ +P S+ +L GR P L P +R +P+P + +F P P A
Sbjct: 650 RPWRLSQSPVPSSGLLSPGGRGPQGALQSPSAQKRGLSPSPPASKSKKRPLFGSPSP-AE 708
Query: 451 KVKYLG 468
K + G
Sbjct: 709 KTPHPG 714
>AL691447-4|CAI13277.1| 655|Homo sapiens family with sequence
similarity 22, member F protein.
Length = 655
Score = 31.5 bits (68), Expect = 3.4
Identities = 14/42 (33%), Positives = 22/42 (52%)
Frame = +1
Query: 280 RKWRIDINPTKSTAVLFKRGRPPNTTLSIPLPTRRVNNPAPA 405
R WR+ +P S+ +L GR P L P +R +P+P+
Sbjct: 549 RPWRLSQSPVPSSGLLSPGGRGPQGALQSPSAQKRGLSPSPS 590
>AL158827-6|CAH72568.1| 622|Homo sapiens family with sequence
similarity 22, member G protein.
Length = 622
Score = 31.5 bits (68), Expect = 3.4
Identities = 14/42 (33%), Positives = 22/42 (52%)
Frame = +1
Query: 280 RKWRIDINPTKSTAVLFKRGRPPNTTLSIPLPTRRVNNPAPA 405
R WR+ +P S+ +L GR P L P +R +P+P+
Sbjct: 516 RPWRLSQSPVPSSGLLSPGGRGPQGALQSPSAQKRGLSPSPS 557
>AL133071-1|CAB61394.1| 613|Homo sapiens hypothetical protein
protein.
Length = 613
Score = 31.5 bits (68), Expect = 3.4
Identities = 20/66 (30%), Positives = 30/66 (45%), Gaps = 3/66 (4%)
Frame = +1
Query: 280 RKWRIDINPTKSTAVLFKRGRPPNTTLSIPLPTRRVNNPAPAV---RPITMFDQPIPWAP 450
R WR+ +P S+ +L GR P L P +R +P+P + +F P P A
Sbjct: 508 RPWRLSQSPVPSSGLLSPGGRGPQGALQSPSAQKRGLSPSPPASKSKKRPLFGSPSP-AE 566
Query: 451 KVKYLG 468
K + G
Sbjct: 567 KTPHPG 572
>AY484971-2|AAR83296.1| 1751|Homo sapiens type XVIII collagen long
variant protein.
Length = 1751
Score = 31.1 bits (67), Expect = 4.5
Identities = 23/70 (32%), Positives = 29/70 (41%), Gaps = 3/70 (4%)
Frame = +2
Query: 155 PGLRRPIWRSSPMTPPSTTRVGRRRCFIDDFRPQLPPWDSGSGSGASTLTPRKA---QRC 325
P L RP W +P+T PS R + PPW S + L+P A Q+
Sbjct: 196 PSLGRP-W--APLTGPSVPPPSSGRASLSSLLGGAPPWGSLQDPDSQGLSPAAAAPSQQL 252
Query: 326 SSKGVALRTP 355
V LRTP
Sbjct: 253 QRPDVRLRTP 262
>AF174114-1|AAD53860.1| 133|Homo sapiens immunoglobulin heavy chain
variable region protein.
Length = 133
Score = 31.1 bits (67), Expect = 4.5
Identities = 14/37 (37%), Positives = 19/37 (51%), Gaps = 1/37 (2%)
Frame = +1
Query: 181 LFADDTAIYYSCRKKALLHRRLQTAATTM-GQWFRKW 288
L +DDTA+YY R + + H + T G WF W
Sbjct: 86 LRSDDTAVYYCARDQGIPHYDFWSGITPEDGDWFDPW 122
>Z83844-3|CAI20370.2| 701|Homo sapiens SH3-domain binding protein 1
protein.
Length = 701
Score = 30.3 bits (65), Expect = 7.9
Identities = 25/77 (32%), Positives = 29/77 (37%)
Frame = +2
Query: 173 IWRSSPMTPPSTTRVGRRRCFIDDFRPQLPPWDSGSGSGASTLTPRKAQRCSSKGVALRT 352
+ RS P T + RR RP +PP SGS +S P S G
Sbjct: 547 VTRSPPETAAPVEDMARRTKRPAPARPTMPP-PQVSGSRSSPPAPPLPPGSGSPGTPQAL 605
Query: 353 PR*ASLSRLGASITPPP 403
PR S L A PPP
Sbjct: 606 PRRLVGSSLRAPTVPPP 622
>CR456576-1|CAG30462.1| 701|Homo sapiens SH3BP1 protein.
Length = 701
Score = 30.3 bits (65), Expect = 7.9
Identities = 25/77 (32%), Positives = 29/77 (37%)
Frame = +2
Query: 173 IWRSSPMTPPSTTRVGRRRCFIDDFRPQLPPWDSGSGSGASTLTPRKAQRCSSKGVALRT 352
+ RS P T + RR RP +PP SGS +S P S G
Sbjct: 547 VTRSPPETAAPVEDMARRTKRPAPARPTMPP-PQVSGSRSSPPAPPLPPGSGSPGTPQAL 605
Query: 353 PR*ASLSRLGASITPPP 403
PR S L A PPP
Sbjct: 606 PRRLVGSSLRAPTVPPP 622
>BC106053-1|AAI06054.1| 841|Homo sapiens MAP7 domain containing 1
protein.
Length = 841
Score = 30.3 bits (65), Expect = 7.9
Identities = 24/83 (28%), Positives = 35/83 (42%), Gaps = 1/83 (1%)
Frame = +2
Query: 278 SGSGASTLTPRKAQRCSSKGVALRTPR*ASLSR-LGASITPPPPFAQSRCSTSPYRGPRR 454
S S AS L+P+ R SS + P S G ++ P PP + ++ R R+
Sbjct: 452 SASTASELSPKSKARPSSPSTSWHRPASPCPSPGPGHTLPPKPPSPRGTTASPKGRVRRK 511
Query: 455 SNI*ASPSTVG*HSAPTSRRYAT 523
SPS G S+R A+
Sbjct: 512 EEAKESPSAAGPEDKSQSKRRAS 534
>BC067256-1|AAH67256.1| 678|Homo sapiens MAP7D1 protein protein.
Length = 678
Score = 30.3 bits (65), Expect = 7.9
Identities = 24/83 (28%), Positives = 35/83 (42%), Gaps = 1/83 (1%)
Frame = +2
Query: 278 SGSGASTLTPRKAQRCSSKGVALRTPR*ASLSR-LGASITPPPPFAQSRCSTSPYRGPRR 454
S S AS L+P+ R SS + P S G ++ P PP + ++ R R+
Sbjct: 290 SASTASELSPKSKARPSSPSTSWHRPASPCPSPGPGHTLPPKPPSPRGTTASPKGRVRRK 349
Query: 455 SNI*ASPSTVG*HSAPTSRRYAT 523
SPS G S+R A+
Sbjct: 350 EEAKESPSAAGPEDKSQSKRRAS 372
>BC008282-1|AAH08282.1| 621|Homo sapiens SH3BP1 protein protein.
Length = 621
Score = 30.3 bits (65), Expect = 7.9
Identities = 25/77 (32%), Positives = 29/77 (37%)
Frame = +2
Query: 173 IWRSSPMTPPSTTRVGRRRCFIDDFRPQLPPWDSGSGSGASTLTPRKAQRCSSKGVALRT 352
+ RS P T + RR RP +PP SGS +S P S G
Sbjct: 467 VTRSPPETAAPVEDMARRTKRPAPARPTMPP-PQVSGSRSSPPAPPLPPGSGSPGTPQAL 525
Query: 353 PR*ASLSRLGASITPPP 403
PR S L A PPP
Sbjct: 526 PRRLVGSSLRAPTVPPP 542
>AL133561-1|CAB63715.1| 580|Homo sapiens hypothetical protein
protein.
Length = 580
Score = 30.3 bits (65), Expect = 7.9
Identities = 39/116 (33%), Positives = 47/116 (40%), Gaps = 7/116 (6%)
Frame = +2
Query: 179 RSSPM-TPPSTTRVGRRRCFIDDFRPQLPPWDSGSGSGASTLTPRKAQRCSSKGVA--LR 349
R+SPM TPP + G P + T TP +A S A R
Sbjct: 119 RASPMRTPPRASPTGTPSTASPTGTPSSASPTGTPPRASPTGTPPRAWATRSPSTASLTR 178
Query: 350 TPR*ASLSRL--GASITPPPPFAQSRCS--TSPYRGPRRSNI*ASPSTVG*HSAPT 505
TP ASL+R AS T PP R S SP R P R ASP+ ++PT
Sbjct: 179 TPSRASLTRWPPRASPTRTPPRESPRMSHRASPTRTPPR----ASPTRRPPRASPT 230
>AK126716-1|BAC86656.1| 250|Homo sapiens protein ( Homo sapiens
cDNA FLJ44762 fis, clone BRACE3031743, moderately
similar to Homo sapiens bruno-like 4, RNA binding
protein. ).
Length = 250
Score = 30.3 bits (65), Expect = 7.9
Identities = 20/51 (39%), Positives = 25/51 (49%), Gaps = 2/51 (3%)
Frame = +2
Query: 155 PGLR--RPIWRSSPMTPPSTTRVGRRRCFIDDFRPQLPPWDSGSGSGASTL 301
PG R RP+W SS TP + R G ++ + PW S SG A TL
Sbjct: 199 PGRREPRPVWWSSSPTPTRSARCGECSRWLARWACS-TPWPSLSGPTAPTL 248
>AF218002-1|AAG17244.1| 554|Homo sapiens unknown protein.
Length = 554
Score = 30.3 bits (65), Expect = 7.9
Identities = 24/83 (28%), Positives = 35/83 (42%), Gaps = 1/83 (1%)
Frame = +2
Query: 278 SGSGASTLTPRKAQRCSSKGVALRTPR*ASLSR-LGASITPPPPFAQSRCSTSPYRGPRR 454
S S AS L+P+ R SS + P S G ++ P PP + ++ R R+
Sbjct: 120 SASTASELSPKSKARPSSPSTSWHRPASPCPSPGPGHTLPPKPPSPRGTTASPKGRVRRK 179
Query: 455 SNI*ASPSTVG*HSAPTSRRYAT 523
SPS G S+R A+
Sbjct: 180 EEAKESPSAAGPEDKSQSKRRAS 202
>AB033013-1|BAA86501.2| 813|Homo sapiens KIAA1187 protein protein.
Length = 813
Score = 30.3 bits (65), Expect = 7.9
Identities = 24/83 (28%), Positives = 35/83 (42%), Gaps = 1/83 (1%)
Frame = +2
Query: 278 SGSGASTLTPRKAQRCSSKGVALRTPR*ASLSR-LGASITPPPPFAQSRCSTSPYRGPRR 454
S S AS L+P+ R SS + P S G ++ P PP + ++ R R+
Sbjct: 425 SASTASELSPKSKARPSSPSTSWHRPASPCPSPGPGHTLPPKPPSPRGTTASPKGRVRRK 484
Query: 455 SNI*ASPSTVG*HSAPTSRRYAT 523
SPS G S+R A+
Sbjct: 485 EEAKESPSAAGPEDKSQSKRRAS 507
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 111,996,092
Number of Sequences: 237096
Number of extensions: 2763618
Number of successful extensions: 20200
Number of sequences better than 10.0: 26
Number of HSP's better than 10.0 without gapping: 19004
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 20191
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 9199990470
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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