Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP11_FL5_H12
         (814 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC027990-1|AAH27990.1|  770|Homo sapiens tetratricopeptide repea...    66   1e-10
AY358762-1|AAQ89122.1|  653|Homo sapiens DRDL5813 protein.             66   1e-10
AL833086-1|CAD89930.1|  462|Homo sapiens hypothetical protein pr...    66   1e-10
AK074095-1|BAB84921.1|  454|Homo sapiens FLJ00166 protein protein.     66   1e-10
AK055984-1|BAB71064.1|  770|Homo sapiens protein ( Homo sapiens ...    66   1e-10
AB075860-1|BAB85566.2|  660|Homo sapiens KIAA1980 protein protein.     66   1e-10

>BC027990-1|AAH27990.1|  770|Homo sapiens tetratricopeptide repeat
           domain 14 protein.
          Length = 770

 Score = 66.1 bits (154), Expect = 1e-10
 Identities = 33/90 (36%), Positives = 53/90 (58%), Gaps = 4/90 (4%)
 Frame = +3

Query: 450 ENYEAILEKSPGFNNPNCIQFLSEHLGIANMHCTNFSYLRG----RFAPSEYADELRQAQ 617
           E+YE +++ S GF NP  ++FL E LGI   +    S +RG     F+  ++A  LR+ Q
Sbjct: 245 ESYENVMQSSLGFVNPGVVEFLLEKLGIDESNPP--SLMRGLQSKNFSEDDFASALRKKQ 302

Query: 618 ASKWAFRSVAXGIEHFKAGKHSEAFQCLNK 707
           ++ WA + V  G+++FK G+H +A    NK
Sbjct: 303 SASWALKCVKIGVDYFKVGRHVDAMNEYNK 332


>AY358762-1|AAQ89122.1|  653|Homo sapiens DRDL5813 protein.
          Length = 653

 Score = 66.1 bits (154), Expect = 1e-10
 Identities = 33/90 (36%), Positives = 53/90 (58%), Gaps = 4/90 (4%)
 Frame = +3

Query: 450 ENYEAILEKSPGFNNPNCIQFLSEHLGIANMHCTNFSYLRG----RFAPSEYADELRQAQ 617
           E+YE +++ S GF NP  ++FL E LGI   +    S +RG     F+  ++A  LR+ Q
Sbjct: 245 ESYENVMQSSLGFVNPGVVEFLLEKLGIDESNPP--SLMRGLQSKNFSEDDFASALRKKQ 302

Query: 618 ASKWAFRSVAXGIEHFKAGKHSEAFQCLNK 707
           ++ WA + V  G+++FK G+H +A    NK
Sbjct: 303 SASWALKCVKIGVDYFKVGRHVDAMNEYNK 332


>AL833086-1|CAD89930.1|  462|Homo sapiens hypothetical protein
           protein.
          Length = 462

 Score = 66.1 bits (154), Expect = 1e-10
 Identities = 33/90 (36%), Positives = 53/90 (58%), Gaps = 4/90 (4%)
 Frame = +3

Query: 450 ENYEAILEKSPGFNNPNCIQFLSEHLGIANMHCTNFSYLRG----RFAPSEYADELRQAQ 617
           E+YE +++ S GF NP  ++FL E LGI   +    S +RG     F+  ++A  LR+ Q
Sbjct: 268 ESYENVMQSSLGFVNPGVVEFLLEKLGIDESNPP--SLMRGLQSKNFSEDDFASALRKKQ 325

Query: 618 ASKWAFRSVAXGIEHFKAGKHSEAFQCLNK 707
           ++ WA + V  G+++FK G+H +A    NK
Sbjct: 326 SASWALKCVKIGVDYFKVGRHVDAMNEYNK 355


>AK074095-1|BAB84921.1|  454|Homo sapiens FLJ00166 protein protein.
          Length = 454

 Score = 66.1 bits (154), Expect = 1e-10
 Identities = 33/90 (36%), Positives = 53/90 (58%), Gaps = 4/90 (4%)
 Frame = +3

Query: 450 ENYEAILEKSPGFNNPNCIQFLSEHLGIANMHCTNFSYLRG----RFAPSEYADELRQAQ 617
           E+YE +++ S GF NP  ++FL E LGI   +    S +RG     F+  ++A  LR+ Q
Sbjct: 260 ESYENVMQSSLGFVNPGVVEFLLEKLGIDESNPP--SLMRGLQSKNFSEDDFASALRKKQ 317

Query: 618 ASKWAFRSVAXGIEHFKAGKHSEAFQCLNK 707
           ++ WA + V  G+++FK G+H +A    NK
Sbjct: 318 SASWALKCVKIGVDYFKVGRHVDAMNEYNK 347


>AK055984-1|BAB71064.1|  770|Homo sapiens protein ( Homo sapiens
           cDNA FLJ31422 fis, clone NT2NE2000384, weakly similar to
           MICRONUCLEAR LINKER HISTONE POLYPROTEIN. ).
          Length = 770

 Score = 66.1 bits (154), Expect = 1e-10
 Identities = 33/90 (36%), Positives = 53/90 (58%), Gaps = 4/90 (4%)
 Frame = +3

Query: 450 ENYEAILEKSPGFNNPNCIQFLSEHLGIANMHCTNFSYLRG----RFAPSEYADELRQAQ 617
           E+YE +++ S GF NP  ++FL E LGI   +    S +RG     F+  ++A  LR+ Q
Sbjct: 245 ESYENVMQSSLGFVNPGVVEFLLEKLGIDESNPP--SLMRGLQSKNFSEDDFASALRKKQ 302

Query: 618 ASKWAFRSVAXGIEHFKAGKHSEAFQCLNK 707
           ++ WA + V  G+++FK G+H +A    NK
Sbjct: 303 SASWALKCVKIGVDYFKVGRHVDAMNEYNK 332


>AB075860-1|BAB85566.2|  660|Homo sapiens KIAA1980 protein protein.
          Length = 660

 Score = 66.1 bits (154), Expect = 1e-10
 Identities = 33/90 (36%), Positives = 53/90 (58%), Gaps = 4/90 (4%)
 Frame = +3

Query: 450 ENYEAILEKSPGFNNPNCIQFLSEHLGIANMHCTNFSYLRG----RFAPSEYADELRQAQ 617
           E+YE +++ S GF NP  ++FL E LGI   +    S +RG     F+  ++A  LR+ Q
Sbjct: 135 ESYENVMQSSLGFVNPGVVEFLLEKLGIDESNPP--SLMRGLQSKNFSEDDFASALRKKQ 192

Query: 618 ASKWAFRSVAXGIEHFKAGKHSEAFQCLNK 707
           ++ WA + V  G+++FK G+H +A    NK
Sbjct: 193 SASWALKCVKIGVDYFKVGRHVDAMNEYNK 222


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 112,192,615
Number of Sequences: 237096
Number of extensions: 2352491
Number of successful extensions: 7758
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 7595
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7752
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 10092110758
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)