Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP11_FL5_H09
         (689 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

12_01_0033 - 272848-272943,274026-274169,274264-274375,274521-27...    29   2.6  
11_01_0035 - 256087-256185,256287-256430,256521-256632,256777-25...    29   2.6  
07_01_0080 + 587674-588510                                             29   4.6  

>12_01_0033 -
           272848-272943,274026-274169,274264-274375,274521-274702,
           274781-274912,275038-276330,279841-280545,280649-280695,
           280787-280865
          Length = 929

 Score = 29.5 bits (63), Expect = 2.6
 Identities = 10/15 (66%), Positives = 10/15 (66%)
 Frame = -1

Query: 656 PXPPPPPXXXGGXPP 612
           P PPPPP   GG PP
Sbjct: 624 PPPPPPPGKPGGPPP 638


>11_01_0035 -
           256087-256185,256287-256430,256521-256632,256777-256958,
           257038-257169,257297-258589,259133-259837,260465-260549,
           260604-260650,260810-260900,261838-262101,262195-262309,
           262455-262570,262713-262847,262969-263036,263292-263411
          Length = 1235

 Score = 29.5 bits (63), Expect = 2.6
 Identities = 10/15 (66%), Positives = 10/15 (66%)
 Frame = -1

Query: 656 PXPPPPPXXXGGXPP 612
           P PPPPP   GG PP
Sbjct: 929 PPPPPPPGKPGGPPP 943


>07_01_0080 + 587674-588510
          Length = 278

 Score = 28.7 bits (61), Expect = 4.6
 Identities = 11/26 (42%), Positives = 11/26 (42%)
 Frame = -1

Query: 689 PXXGXXXXXXXPXPPPPPXXXGGXPP 612
           P  G       P PPPPP    G PP
Sbjct: 80  PRLGGDGMFRRPPPPPPPPPSSGSPP 105


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,450,192
Number of Sequences: 37544
Number of extensions: 180158
Number of successful extensions: 5898
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 1038
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3505
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1756684372
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)