Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP11_FL5_H07
(770 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
03_05_0847 + 28186873-28188147 32 0.58
01_06_0381 + 28878811-28879120,28880189-28880331,28880753-288815... 32 0.58
01_07_0213 - 42028941-42029055,42029444-42029480,42029876-420302... 31 1.0
03_06_0180 + 32175658-32178145,32178765-32178808 29 3.1
03_05_0759 - 27500941-27501568,27503540-27504154,27504228-27504598 29 3.1
11_02_0065 - 7938007-7938393,7939292-7939435,7940597-7940665,794... 29 4.1
04_04_0452 + 25342306-25342552,25342658-25342785,25342868-253431... 29 4.1
12_01_0234 + 1755704-1756120,1756203-1756313,1756923-1757063,175... 29 5.4
11_01_0236 + 1811822-1812971,1814930-1814979,1815676-1816116,181... 29 5.4
10_01_0028 - 359988-359996,360228-360332,360415-360536,360676-36... 29 5.4
08_02_0707 - 20212190-20214592 29 5.4
05_05_0227 - 23449579-23450459,23450574-23450691 29 5.4
07_03_0471 + 18501496-18502104,18503009-18503260,18503367-185035... 28 7.2
06_03_0220 + 18276641-18276915,18278445-18278676 28 7.2
02_02_0156 - 7277793-7277875,7278535-7278638,7278808-7279211,727... 28 7.2
01_06_0140 - 26881282-26881290,26882027-26882128,26882816-268829... 28 7.2
11_01_0044 + 340486-340854,341855-341911,343100-343974,344065-34... 28 9.5
09_06_0239 - 21794691-21795986 28 9.5
08_01_1005 - 10183796-10185183,10186673-10186859 28 9.5
03_04_0023 + 16537257-16537272,16537515-16537929,16538404-165384... 28 9.5
>03_05_0847 + 28186873-28188147
Length = 424
Score = 31.9 bits (69), Expect = 0.58
Identities = 15/35 (42%), Positives = 18/35 (51%)
Frame = +3
Query: 15 PLPHPSNRNTPLLHGRNRQXDGTRAVDGTTEHPSG 119
PLP S+R+ P L R R+ DG VD P G
Sbjct: 161 PLPSMSSRDAPCLQMRPRRQDGRLIVDAVVVRPRG 195
>01_06_0381 +
28878811-28879120,28880189-28880331,28880753-28881532,
28882568-28883968
Length = 877
Score = 31.9 bits (69), Expect = 0.58
Identities = 16/41 (39%), Positives = 21/41 (51%)
Frame = +1
Query: 520 TEEANREHLSSTHKHALHRKNLHPPAEPEHRRIARHERXGR 642
+ E EH SS +H HR + H + EHR RH+R R
Sbjct: 778 SSEDEHEHRSSKSRHR-HRDDYHYHEDDEHRSSHRHQRDHR 817
Score = 30.7 bits (66), Expect = 1.3
Identities = 19/52 (36%), Positives = 23/52 (44%)
Frame = +1
Query: 460 SHHANYNFTGSTSLTRCYSHTEEANREHLSSTHKHALHRKNLHPPAEPEHRR 615
S NY+ S +R H E +R H S HKH L R + EP H R
Sbjct: 725 SDEENYDSEESYKHSR-KKHRSEDSRAHTSDVHKHKLKRHS--KDLEPRHHR 773
>01_07_0213 -
42028941-42029055,42029444-42029480,42029876-42030244,
42030332-42031201,42051574-42052891
Length = 902
Score = 31.1 bits (67), Expect = 1.0
Identities = 25/72 (34%), Positives = 34/72 (47%)
Frame = +1
Query: 331 SRRSARFSRTGWAATAEVSPPATCADSQDILPPCKLLTATNLTSHHANYNFTGSTSLTRC 510
+RR R TG A+ S PAT + + P +LLT+ TSH + N T S
Sbjct: 671 ARRRERQQLTGSAS----SSPATASAAAASKKP-RLLTSQTTTSHTSTSNATTPRSFDTT 725
Query: 511 YSHTEEANREHL 546
SH + + RE L
Sbjct: 726 SSHQDASFRESL 737
>03_06_0180 + 32175658-32178145,32178765-32178808
Length = 843
Score = 29.5 bits (63), Expect = 3.1
Identities = 15/43 (34%), Positives = 21/43 (48%)
Frame = +3
Query: 312 RPASVTVEAICPVLADWVGRDRGSLTSGYLCRLTRHFTTMQTS 440
RP SVT+ ++ P L D G ++G GY+ R H S
Sbjct: 345 RPDSVTLVSLLPALTDLNGFNQGKELHGYIVRNCVHMDVFLVS 387
>03_05_0759 - 27500941-27501568,27503540-27504154,27504228-27504598
Length = 537
Score = 29.5 bits (63), Expect = 3.1
Identities = 27/92 (29%), Positives = 36/92 (39%), Gaps = 1/92 (1%)
Frame = +3
Query: 15 PLPHPSNRNTPLLHGRNRQXDGTRA-VDGTTEHPSGATSLPTRTSPRCDAGSARSQSELF 191
PLP P R TP H G R V+ TT T+LP+ SP +Q+
Sbjct: 373 PLPAPCRRQTP--HHHQVAALGARLRVEETT------TTLPSTPSPSSSPQCFSTQTRPL 424
Query: 192 NDTSQSPTRRRALAQVQPERGGSNIGSPCWRR 287
+S + R P S++ SP W R
Sbjct: 425 VASSNYGSSTRRTRSTPPTSSASSMTSPRWCR 456
>11_02_0065 -
7938007-7938393,7939292-7939435,7940597-7940665,
7940762-7940809,7941488-7941584,7941688-7941767,
7941841-7941912,7942256-7942350,7943903-7943984,
7945176-7945209,7945255-7945262,7945657-7946058
Length = 505
Score = 29.1 bits (62), Expect = 4.1
Identities = 19/55 (34%), Positives = 24/55 (43%), Gaps = 1/55 (1%)
Frame = +3
Query: 6 ELQPLPHPSNRNTPLLHGRNRQXDGTRAVDGTTEHPSGATSLPT-RTSPRCDAGS 167
+ QP P P + P G N+Q G R DGT G T T+P +GS
Sbjct: 450 QAQPQPQPQPQPQPPA-GANKQPPGPRMPDGTRGFAMGRGKPQTSTTTPSASSGS 503
>04_04_0452 +
25342306-25342552,25342658-25342785,25342868-25343110,
25344530-25344782,25344916-25345151
Length = 368
Score = 29.1 bits (62), Expect = 4.1
Identities = 11/37 (29%), Positives = 20/37 (54%), Gaps = 1/37 (2%)
Frame = -3
Query: 531 GFLSVRVTSCKRGGTRKIVVCVVAGKICCGKK-FAWW 424
GF++ +V C +G I +C A +C + +A+W
Sbjct: 291 GFVTAKVACCGQGPYNGIGLCTPASNVCANRDVYAYW 327
>12_01_0234 +
1755704-1756120,1756203-1756313,1756923-1757063,
1757142-1757312,1757412-1757616,1757738-1757910,
1758021-1758103,1758250-1758389,1758569-1758645,
1758711-1758810,1759978-1760606
Length = 748
Score = 28.7 bits (61), Expect = 5.4
Identities = 24/89 (26%), Positives = 35/89 (39%), Gaps = 4/89 (4%)
Frame = +3
Query: 18 LPHPSNRNTPLLHGRNRQXDGTRAVDGTTEHPSGATSLPTRTSPRCDAGSARSQSELFND 197
+P PS+ PLL G +V G +T+ P +PR G+A L +
Sbjct: 369 VPLPSSNGAPLLPSYPPLGYGIMSVPGAYGAAPASTAQPMLYAPRAPPGAAMVPMMLPDG 428
Query: 198 ----TSQSPTRRRALAQVQPERGGSNIGS 272
Q P + LA P++ G GS
Sbjct: 429 RLVYVVQQPGGQLPLASPPPQQAGHRSGS 457
>11_01_0236 + 1811822-1812971,1814930-1814979,1815676-1816116,
1816199-1816309,1816934-1817074,1817153-1817323,
1817421-1817625,1817714-1817886,1817997-1818079,
1818487-1818626,1818806-1818891,1818957-1819142,
1819172-1819365,1820387-1820736,1821153-1821235
Length = 1187
Score = 28.7 bits (61), Expect = 5.4
Identities = 24/89 (26%), Positives = 35/89 (39%), Gaps = 4/89 (4%)
Frame = +3
Query: 18 LPHPSNRNTPLLHGRNRQXDGTRAVDGTTEHPSGATSLPTRTSPRCDAGSARSQSELFND 197
+P PS+ PLL G +V G +T+ P +PR G+A L +
Sbjct: 777 VPLPSSNGAPLLPSYPPLGYGIMSVPGAYGAAPASTAQPMLYAPRAPPGAAMVPMMLPDG 836
Query: 198 ----TSQSPTRRRALAQVQPERGGSNIGS 272
Q P + LA P++ G GS
Sbjct: 837 RLVYVVQQPGGQLPLASPPPQQAGHRSGS 865
>10_01_0028 -
359988-359996,360228-360332,360415-360536,360676-360763,
360988-361056,361132-361461,361544-361610,361695-361753,
361838-362056,362224-362289,362370-362500,362683-362782,
362864-363001,363111-363218,363627-363723,363806-364257
Length = 719
Score = 28.7 bits (61), Expect = 5.4
Identities = 18/47 (38%), Positives = 27/47 (57%)
Frame = +3
Query: 111 PSGATSLPTRTSPRCDAGSARSQSELFNDTSQSPTRRRALAQVQPER 251
PS A + PTRTS R A SA + ++ ++ S T RR A+ +P +
Sbjct: 6 PSSAAA-PTRTSTRKRAASASASAKATDEPSTKRT-RRPKAETKPRK 50
>08_02_0707 - 20212190-20214592
Length = 800
Score = 28.7 bits (61), Expect = 5.4
Identities = 16/56 (28%), Positives = 27/56 (48%)
Frame = +1
Query: 460 SHHANYNFTGSTSLTRCYSHTEEANREHLSSTHKHALHRKNLHPPAEPEHRRIARH 627
SHH +++ S + S TE + +E+ S H H H + H +E H++ H
Sbjct: 549 SHHHDHHHDSSNEESHHNSLTENSCKENHSHCHGHDHHHHHHHDHSE-HHQQSGDH 603
>05_05_0227 - 23449579-23450459,23450574-23450691
Length = 332
Score = 28.7 bits (61), Expect = 5.4
Identities = 12/22 (54%), Positives = 13/22 (59%)
Frame = -1
Query: 338 RLDGNGGRPTGPPNDETTPPAR 273
R DG GGRP+ P E T P R
Sbjct: 231 RGDGGGGRPSAPARREGTDPCR 252
>07_03_0471 + 18501496-18502104,18503009-18503260,18503367-18503537,
18503693-18503743,18503868-18503960,18504125-18504220,
18504318-18504368,18504452-18504570,18504909-18505017,
18505391-18505513,18505590-18505661,18505963-18506034,
18506125-18506191,18506260-18506402,18506494-18506565,
18506632-18506760,18507317-18507472,18507579-18507692,
18507791-18507889,18507974-18508051,18508402-18508536,
18509081-18509155,18509247-18509361,18509458-18509828,
18509903-18509965,18510049-18510120,18510285-18510413,
18510512-18510628,18510902-18511018
Length = 1289
Score = 28.3 bits (60), Expect = 7.2
Identities = 13/37 (35%), Positives = 17/37 (45%)
Frame = -1
Query: 392 GGETSAVAAHPVRENRADRLDGNGGRPTGPPNDETTP 282
G A +PV + R+ R G+ P GPPN P
Sbjct: 980 GASFGAAGTNPVADKRSGRGKGHSFVPFGPPNGAHKP 1016
>06_03_0220 + 18276641-18276915,18278445-18278676
Length = 168
Score = 28.3 bits (60), Expect = 7.2
Identities = 27/100 (27%), Positives = 37/100 (37%)
Frame = -2
Query: 385 RLPRSRPTQSARTGQIASTVTEAGRRVRQTTRPRLQHGLPILEPPRSGCTCARARRLVGD 206
R P S Q A G+ + + R + +RP LP L P RSG RR G+
Sbjct: 66 RPPPSEAVQPAAAGRARAGRAQERRERSRCSRPPFSEALPPLIPSRSG------RRPSGE 119
Query: 205 CEVSLNNSDCDRALPASQRGDVLVGKDVAPDGCSVVPSTA 86
+ L RA P L + P + P+ A
Sbjct: 120 DSLPLPFLPFPRAPPPLAVPPPLAVPPLRPSAAAFAPAAA 159
>02_02_0156 -
7277793-7277875,7278535-7278638,7278808-7279211,
7279403-7279543,7279700-7279904,7279984-7280093
Length = 348
Score = 28.3 bits (60), Expect = 7.2
Identities = 15/59 (25%), Positives = 24/59 (40%)
Frame = +3
Query: 81 TRAVDGTTEHPSGATSLPTRTSPRCDAGSARSQSELFNDTSQSPTRRRALAQVQPERGG 257
TR D +H S + + + A S + F+DTS + ++ V PE G
Sbjct: 182 TRQADSVLKHSSSSPGITSLGKGTSVGSGAASDLDNFSDTSDRQSEAGSMLSVDPEISG 240
>01_06_0140 -
26881282-26881290,26882027-26882128,26882816-26882924,
26883712-26883860,26883941-26884043,26884635-26884810,
26885004-26885066,26885258-26885346,26885428-26885538,
26885610-26885744,26886415-26886580,26886788-26886856,
26886943-26887230,26888612-26888866
Length = 607
Score = 28.3 bits (60), Expect = 7.2
Identities = 16/39 (41%), Positives = 19/39 (48%)
Frame = -1
Query: 647 IRRPXRSCLAMRRCSGSAGGCRFFR*SACLCVLDKCSRL 531
+R R A R C GSAG R R SA V+ + RL
Sbjct: 31 LRPAARLSFAPRWCGGSAGAARARRESAVTSVISRAPRL 69
>11_01_0044 +
340486-340854,341855-341911,343100-343974,344065-344398,
345553-345645,345913-346062
Length = 625
Score = 27.9 bits (59), Expect = 9.5
Identities = 17/57 (29%), Positives = 24/57 (42%)
Frame = +1
Query: 334 RRSARFSRTGWAATAEVSPPATCADSQDILPPCKLLTATNLTSHHANYNFTGSTSLT 504
RR F+RTGW A A V P + L+ T L + + F + S+T
Sbjct: 433 RRKVSFARTGWLAAALVPMPMAFFLMWKLHDVNTLVAGTALIGLSSGFIFAAAVSVT 489
>09_06_0239 - 21794691-21795986
Length = 431
Score = 27.9 bits (59), Expect = 9.5
Identities = 20/60 (33%), Positives = 26/60 (43%), Gaps = 1/60 (1%)
Frame = +1
Query: 349 FSRTGWAATAEVSPPATC-ADSQDILPPCKLLTATNLTSHHANYNFTGSTSLTRCYSHTE 525
F T + P +C A + D+ P K T NLTS NY ++ S T Y TE
Sbjct: 105 FDTTSDLLWTQCQPCLSCVAQAGDMYDPNKTETYANLTSSSYNYTYS-KQSFTSGYFATE 163
>08_01_1005 - 10183796-10185183,10186673-10186859
Length = 524
Score = 27.9 bits (59), Expect = 9.5
Identities = 25/104 (24%), Positives = 36/104 (34%)
Frame = -2
Query: 391 EVRLPRSRPTQSARTGQIASTVTEAGRRVRQTTRPRLQHGLPILEPPRSGCTCARARRLV 212
+VR +S+ + TG+ A R R TT L+H P RRL+
Sbjct: 48 QVRYSQSKRFEKKMTGEHKKAAAAARTRTRSTTVLELKHHSLTAIPDHPAAQETYLRRLL 107
Query: 211 GDCEVSLNNSDCDRALPASQRGDVLVGKDVAPDGCSVVPSTARV 80
E N+ +Q G A G VP T+ +
Sbjct: 108 AADEARANSLQLRNKAAFTQSGKKATAAAAAAAGAE-VPLTSGI 150
>03_04_0023 +
16537257-16537272,16537515-16537929,16538404-16538466,
16538604-16538607
Length = 165
Score = 27.9 bits (59), Expect = 9.5
Identities = 15/47 (31%), Positives = 21/47 (44%)
Frame = +1
Query: 490 STSLTRCYSHTEEANREHLSSTHKHALHRKNLHPPAEPEHRRIARHE 630
+TSL R H + + H HA H + PP H ++ RHE
Sbjct: 5 ATSLNRSIDHKQGGQQRGTPQQHLHAGHAQE-QPPGH-GHGQVQRHE 49
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 22,054,132
Number of Sequences: 37544
Number of extensions: 487598
Number of successful extensions: 1999
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 1895
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1997
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 2075009728
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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