Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP11_FL5_H07
(770 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC070050-1|AAH70050.1| 1022|Homo sapiens SRRM2 protein protein. 32 2.6
AF201422-1|AAF21439.1| 2296|Homo sapiens splicing coactivator su... 32 2.6
AB016092-1|BAA83718.1| 2752|Homo sapiens RNA binding protein pro... 32 2.6
AB016088-1|BAA83714.1| 956|Homo sapiens RNA binding protein pro... 32 2.6
AB016087-1|BAA83713.1| 1262|Homo sapiens RNA binding protein pro... 32 2.6
AB002322-1|BAA20782.3| 2800|Homo sapiens KIAA0324 protein protein. 32 2.6
CR457133-1|CAG33414.1| 144|Homo sapiens TU3A protein. 31 3.5
BC010561-1|AAH10561.1| 144|Homo sapiens family with sequence si... 31 3.5
AK055443-1|BAB70924.1| 135|Homo sapiens protein ( Homo sapiens ... 31 3.5
AF089854-1|AAD16094.1| 144|Homo sapiens DRR1 protein. 31 3.5
AF089853-1|AAD16093.1| 144|Homo sapiens DRR1 protein. 31 3.5
AB023811-1|BAA82845.1| 144|Homo sapiens TU3A protein. 31 3.5
AB023810-1|BAA83072.1| 144|Homo sapiens TU3A protein. 31 3.5
AK096082-1|BAC04698.1| 261|Homo sapiens protein ( Homo sapiens ... 30 8.0
>BC070050-1|AAH70050.1| 1022|Homo sapiens SRRM2 protein protein.
Length = 1022
Score = 31.9 bits (69), Expect = 2.6
Identities = 29/89 (32%), Positives = 42/89 (47%), Gaps = 3/89 (3%)
Frame = +3
Query: 60 RNRQXDGTR--AVDGTTEHPSGATSLPTRTSPRCDAGSARSQSELFNDT-SQSPTRRRAL 230
RN Q G A G + S AT +R+ G +RS++ + S++PTRRR+
Sbjct: 546 RNTQRRGRSRSARRGRSHSRSPATRGRSRSRTPARRGRSRSRTPARRRSRSRTPTRRRSR 605
Query: 231 AQVQPERGGSNIGSPCWRRGLVVWRTRRP 317
++ RG S +P RR RTR P
Sbjct: 606 SRTPARRGRSRSRTPARRRS----RTRSP 630
>AF201422-1|AAF21439.1| 2296|Homo sapiens splicing coactivator
subunit SRm300 protein.
Length = 2296
Score = 31.9 bits (69), Expect = 2.6
Identities = 29/89 (32%), Positives = 42/89 (47%), Gaps = 3/89 (3%)
Frame = +3
Query: 60 RNRQXDGTR--AVDGTTEHPSGATSLPTRTSPRCDAGSARSQSELFNDT-SQSPTRRRAL 230
RN Q G A G + S AT +R+ G +RS++ + S++PTRRR+
Sbjct: 546 RNTQRRGRSRSARRGRSHSRSPATRGRSRSRTPARRGRSRSRTPARRRSRSRTPTRRRSR 605
Query: 231 AQVQPERGGSNIGSPCWRRGLVVWRTRRP 317
++ RG S +P RR RTR P
Sbjct: 606 SRTPARRGRSRSRTPARRRS----RTRSP 630
>AB016092-1|BAA83718.1| 2752|Homo sapiens RNA binding protein
protein.
Length = 2752
Score = 31.9 bits (69), Expect = 2.6
Identities = 29/89 (32%), Positives = 42/89 (47%), Gaps = 3/89 (3%)
Frame = +3
Query: 60 RNRQXDGTR--AVDGTTEHPSGATSLPTRTSPRCDAGSARSQSELFNDT-SQSPTRRRAL 230
RN Q G A G + S AT +R+ G +RS++ + S++PTRRR+
Sbjct: 546 RNTQRRGRSRSARRGRSHSRSPATRGRSRSRTPARRGRSRSRTPARRRSRSRTPTRRRSR 605
Query: 231 AQVQPERGGSNIGSPCWRRGLVVWRTRRP 317
++ RG S +P RR RTR P
Sbjct: 606 SRTPARRGRSRSRTPARRRS----RTRSP 630
>AB016088-1|BAA83714.1| 956|Homo sapiens RNA binding protein
protein.
Length = 956
Score = 31.9 bits (69), Expect = 2.6
Identities = 29/89 (32%), Positives = 42/89 (47%), Gaps = 3/89 (3%)
Frame = +3
Query: 60 RNRQXDGTR--AVDGTTEHPSGATSLPTRTSPRCDAGSARSQSELFNDT-SQSPTRRRAL 230
RN Q G A G + S AT +R+ G +RS++ + S++PTRRR+
Sbjct: 511 RNTQRRGRSRSARRGRSHSRSPATRGRSRSRTPARRGRSRSRTPARRRSRSRTPTRRRSR 570
Query: 231 AQVQPERGGSNIGSPCWRRGLVVWRTRRP 317
++ RG S +P RR RTR P
Sbjct: 571 SRTPARRGRSRSRTPARRRS----RTRSP 595
>AB016087-1|BAA83713.1| 1262|Homo sapiens RNA binding protein
protein.
Length = 1262
Score = 31.9 bits (69), Expect = 2.6
Identities = 29/89 (32%), Positives = 42/89 (47%), Gaps = 3/89 (3%)
Frame = +3
Query: 60 RNRQXDGTR--AVDGTTEHPSGATSLPTRTSPRCDAGSARSQSELFNDT-SQSPTRRRAL 230
RN Q G A G + S AT +R+ G +RS++ + S++PTRRR+
Sbjct: 336 RNTQRRGRSRSARRGRSHSRSPATRGRSRSRTPARRGRSRSRTPARRRSRSRTPTRRRSR 395
Query: 231 AQVQPERGGSNIGSPCWRRGLVVWRTRRP 317
++ RG S +P RR RTR P
Sbjct: 396 SRTPARRGRSRSRTPARRRS----RTRSP 420
>AB002322-1|BAA20782.3| 2800|Homo sapiens KIAA0324 protein protein.
Length = 2800
Score = 31.9 bits (69), Expect = 2.6
Identities = 29/89 (32%), Positives = 42/89 (47%), Gaps = 3/89 (3%)
Frame = +3
Query: 60 RNRQXDGTR--AVDGTTEHPSGATSLPTRTSPRCDAGSARSQSELFNDT-SQSPTRRRAL 230
RN Q G A G + S AT +R+ G +RS++ + S++PTRRR+
Sbjct: 594 RNTQRRGRSRSARRGRSHSRSPATRGRSRSRTPARRGRSRSRTPARRRSRSRTPTRRRSR 653
Query: 231 AQVQPERGGSNIGSPCWRRGLVVWRTRRP 317
++ RG S +P RR RTR P
Sbjct: 654 SRTPARRGRSRSRTPARRRS----RTRSP 678
>CR457133-1|CAG33414.1| 144|Homo sapiens TU3A protein.
Length = 144
Score = 31.5 bits (68), Expect = 3.5
Identities = 20/64 (31%), Positives = 30/64 (46%), Gaps = 2/64 (3%)
Frame = +1
Query: 526 EANREHLSSTHKHAL--HRKNLHPPAEPEHRRIARHERXGRLILQVTTTSECVNFXSPXE 699
+A+R H H+ L HR+ L ++PE +R+ H R +LI + E P E
Sbjct: 39 KASRSH-QELHRELLMNHRRGLGVDSKPELQRVLEHRRRNQLIKKKKEELEAKRLQCPFE 97
Query: 700 TCLL 711
LL
Sbjct: 98 QELL 101
>BC010561-1|AAH10561.1| 144|Homo sapiens family with sequence
similarity 107, member A protein.
Length = 144
Score = 31.5 bits (68), Expect = 3.5
Identities = 20/64 (31%), Positives = 30/64 (46%), Gaps = 2/64 (3%)
Frame = +1
Query: 526 EANREHLSSTHKHAL--HRKNLHPPAEPEHRRIARHERXGRLILQVTTTSECVNFXSPXE 699
+A+R H H+ L HR+ L ++PE +R+ H R +LI + E P E
Sbjct: 39 KASRSH-QELHRELLMNHRRGLGVDSKPELQRVLEHRRRNQLIKKKKEELEAKRLQCPFE 97
Query: 700 TCLL 711
LL
Sbjct: 98 QELL 101
>AK055443-1|BAB70924.1| 135|Homo sapiens protein ( Homo sapiens
cDNA FLJ30881 fis, clone FEBRA2004818, highly similar to
DRR1 PROTEIN. ).
Length = 135
Score = 31.5 bits (68), Expect = 3.5
Identities = 20/64 (31%), Positives = 30/64 (46%), Gaps = 2/64 (3%)
Frame = +1
Query: 526 EANREHLSSTHKHAL--HRKNLHPPAEPEHRRIARHERXGRLILQVTTTSECVNFXSPXE 699
+A+R H H+ L HR+ L ++PE +R+ H R +LI + E P E
Sbjct: 39 KASRSH-QELHRELLMNHRRGLGVDSKPELQRVLEHRRRNQLIKKKKEELEAKRLQCPFE 97
Query: 700 TCLL 711
LL
Sbjct: 98 QELL 101
>AF089854-1|AAD16094.1| 144|Homo sapiens DRR1 protein.
Length = 144
Score = 31.5 bits (68), Expect = 3.5
Identities = 20/64 (31%), Positives = 30/64 (46%), Gaps = 2/64 (3%)
Frame = +1
Query: 526 EANREHLSSTHKHAL--HRKNLHPPAEPEHRRIARHERXGRLILQVTTTSECVNFXSPXE 699
+A+R H H+ L HR+ L ++PE +R+ H R +LI + E P E
Sbjct: 39 KASRSH-QELHRELLMNHRRGLGVDSKPELQRVLEHRRRNQLIKKKKEELEAKRLQCPFE 97
Query: 700 TCLL 711
LL
Sbjct: 98 QELL 101
>AF089853-1|AAD16093.1| 144|Homo sapiens DRR1 protein.
Length = 144
Score = 31.5 bits (68), Expect = 3.5
Identities = 20/64 (31%), Positives = 30/64 (46%), Gaps = 2/64 (3%)
Frame = +1
Query: 526 EANREHLSSTHKHAL--HRKNLHPPAEPEHRRIARHERXGRLILQVTTTSECVNFXSPXE 699
+A+R H H+ L HR+ L ++PE +R+ H R +LI + E P E
Sbjct: 39 KASRSH-QELHRELLMNHRRGLGVDSKPELQRVLEHRRRNQLIKKKKEELEAKRLQCPFE 97
Query: 700 TCLL 711
LL
Sbjct: 98 QELL 101
>AB023811-1|BAA82845.1| 144|Homo sapiens TU3A protein.
Length = 144
Score = 31.5 bits (68), Expect = 3.5
Identities = 20/64 (31%), Positives = 30/64 (46%), Gaps = 2/64 (3%)
Frame = +1
Query: 526 EANREHLSSTHKHAL--HRKNLHPPAEPEHRRIARHERXGRLILQVTTTSECVNFXSPXE 699
+A+R H H+ L HR+ L ++PE +R+ H R +LI + E P E
Sbjct: 39 KASRSH-QELHRELLMNHRRGLGVDSKPELQRVLEHRRRNQLIKKKKEELEAKRLQCPFE 97
Query: 700 TCLL 711
LL
Sbjct: 98 QELL 101
>AB023810-1|BAA83072.1| 144|Homo sapiens TU3A protein.
Length = 144
Score = 31.5 bits (68), Expect = 3.5
Identities = 20/64 (31%), Positives = 30/64 (46%), Gaps = 2/64 (3%)
Frame = +1
Query: 526 EANREHLSSTHKHAL--HRKNLHPPAEPEHRRIARHERXGRLILQVTTTSECVNFXSPXE 699
+A+R H H+ L HR+ L ++PE +R+ H R +LI + E P E
Sbjct: 39 KASRSH-QELHRELLMNHRRGLGVDSKPELQRVLEHRRRNQLIKKKKEELEAKRLQCPFE 97
Query: 700 TCLL 711
LL
Sbjct: 98 QELL 101
>AK096082-1|BAC04698.1| 261|Homo sapiens protein ( Homo sapiens
cDNA FLJ38763 fis, clone KIDNE2014119. ).
Length = 261
Score = 30.3 bits (65), Expect = 8.0
Identities = 34/111 (30%), Positives = 48/111 (43%), Gaps = 7/111 (6%)
Frame = -2
Query: 394 PEVRLPRS-RPTQSARTGQIASTVTEAGRR--VRQTTRPRLQHGLPILEP-PRSGCTCAR 227
PE RL R P QS R ++ ++ T+ G R + + RPRLQ G P P RS R
Sbjct: 135 PEGRLRRRWAPEQSGR--RLGASATQEGERGGFKGSQRPRLQDGAPERGPHGRSDSENPR 192
Query: 226 AR--RLVGDCEVSLNNSDCDRALPASQRG-DVLVGKDVAPDGCSVVPSTAR 83
R R +SL+ S +L A + G+ + +P AR
Sbjct: 193 PREARRPAPFSLSLSPSSAAPSLRAGRAAPGPAAGRATLRSAAAAIPRAAR 243
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 112,707,125
Number of Sequences: 237096
Number of extensions: 2382688
Number of successful extensions: 8604
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 7903
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8599
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 9311505506
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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