Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP11_FL5_G19
(793 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q6AW70 Cluster: Coat protein; n=1; Bombyx mori Macula-l... 298 1e-79
UniRef50_Q8UZB5 Cluster: Coat protein; n=1; Grapevine fleck viru... 83 1e-14
UniRef50_Q71EB5 Cluster: 25kDa coat protein; n=1; Grapevine Red ... 77 5e-13
UniRef50_Q9IW08 Cluster: Replicase-associated protein; n=10; Tym... 61 3e-08
UniRef50_P20124 Cluster: Coat protein; n=10; Tymovirus|Rep: Coat... 61 3e-08
UniRef50_P35927 Cluster: Coat protein; n=2; Erysimum latent viru... 55 2e-06
UniRef50_Q3HWZ1 Cluster: Polyprotein; n=7; Citrus sudden death-a... 53 9e-06
UniRef50_Q8QY74 Cluster: Coat protein; n=1; Passion fruit yellow... 52 2e-05
UniRef50_O89519 Cluster: Virion protein; n=2; Tymovirus|Rep: Vir... 48 2e-04
UniRef50_P03608 Cluster: Coat protein; n=21; Turnip yellow mosai... 48 4e-04
UniRef50_O89518 Cluster: Virion protein; n=1; Wild cucumber mosa... 47 6e-04
UniRef50_P89920 Cluster: Replicase-associated polyprotein; n=5; ... 46 8e-04
UniRef50_P19128 Cluster: Coat protein; n=9; Tymovirus|Rep: Coat ... 43 0.010
UniRef50_P15158 Cluster: Coat protein; n=9; Tymovirus|Rep: Coat ... 40 0.054
UniRef50_Q6CCA2 Cluster: Similarity; n=1; Yarrowia lipolytica|Re... 36 0.88
UniRef50_Q5JJ70 Cluster: Hypothetical membrane protein, conserve... 36 1.2
UniRef50_UPI0000F1DDC7 Cluster: PREDICTED: hypothetical protein;... 36 1.5
UniRef50_A2QQ18 Cluster: Similarity to hypothetical protein AD11... 35 2.7
UniRef50_A2QPM0 Cluster: Putative uncharacterized protein; n=1; ... 35 2.7
UniRef50_Q2J7J5 Cluster: Putative uncharacterized protein; n=3; ... 34 3.6
UniRef50_Q5KNL7 Cluster: ARF guanyl-nucleotide exchange factor, ... 33 6.2
UniRef50_Q2HEG7 Cluster: Putative uncharacterized protein; n=1; ... 33 6.2
UniRef50_UPI0000EBDE86 Cluster: PREDICTED: hypothetical protein;... 33 8.2
UniRef50_Q0LKT7 Cluster: Cytochrome b/b6-like; n=1; Herpetosipho... 33 8.2
UniRef50_Q01H49 Cluster: Chromosome 01 contig 1, DNA sequence; n... 33 8.2
>UniRef50_Q6AW70 Cluster: Coat protein; n=1; Bombyx mori Macula-like
latent virus|Rep: Coat protein - Bombyx mori Macula-like
latent virus
Length = 237
Score = 298 bits (731), Expect = 1e-79
Identities = 155/205 (75%), Positives = 160/205 (78%)
Frame = +1
Query: 19 MEEIVPLXVSAASAIPSLVNAFSSSKPPQTDNPSARSMDMQXXXXXXXXXXXXXXXXXXX 198
MEEIVPL VSAASAIPSLVNAFSSSKPPQTDNPSARSMDMQ
Sbjct: 1 MEEIVPLVVSAASAIPSLVNAFSSSKPPQTDNPSARSMDMQPLPSSDSVVLSSQPLPPAP 60
Query: 199 XXXXXXXXXXXXQRLIIPFQRLYFDLTGTETKSNSVTVQSLPNVSSIIKGYRDAYLVNLE 378
QRLIIPFQRLYFDLTGTETKSNSVTVQSLPNVSSIIKGYRDAYLVNLE
Sbjct: 61 PPPLGSSLGRSPQRLIIPFQRLYFDLTGTETKSNSVTVQSLPNVSSIIKGYRDAYLVNLE 120
Query: 379 AVVFPSAPSLKIPVTVDLCWTTADVTVEGVNLLATPSSSRITIGGLALMHQATLPCDLGL 558
AVVFPSAPSLKIPVTVDLCWTTADVTVEG N+LATPSS+RIT+GGLALMHQATLPCDLG
Sbjct: 121 AVVFPSAPSLKIPVTVDLCWTTADVTVEGFNVLATPSSARITMGGLALMHQATLPCDLGY 180
Query: 559 HQPDHQIPRFHTPTTPXLNIHFHQS 633
P + P +T P LNIHFHQS
Sbjct: 181 INPIIKSPIPYT-NHPRLNIHFHQS 204
>UniRef50_Q8UZB5 Cluster: Coat protein; n=1; Grapevine fleck
virus|Rep: Coat protein - Grapevine fleck virus
Length = 230
Score = 82.6 bits (195), Expect = 1e-14
Identities = 42/107 (39%), Positives = 60/107 (56%)
Frame = +1
Query: 247 IPFQRLYFDLTGTETKSNSVTVQSLPNVSSIIKGYRDAYLVNLEAVVFPSAPSLKIPVTV 426
+PFQ L++D+TGTE+ S+++ S P V ++ + YR A L +LEA V P+A S P TV
Sbjct: 68 LPFQFLWYDITGTESSYTSLSIASRPEVVTVARPYRHARLTSLEAFVQPTASSATYPQTV 127
Query: 427 DLCWTTADVTVEGVNLLATPSSSRITIGGLALMHQATLPCDLGLHQP 567
DLCWT VT +L+ + RI G + LP +L P
Sbjct: 128 DLCWTIDSVTPARSEILSVFGAQRIAWGSVHFSAPILLPAELSSLNP 174
>UniRef50_Q71EB5 Cluster: 25kDa coat protein; n=1; Grapevine Red
Globe virus|Rep: 25kDa coat protein - Grapevine Red
Globe virus
Length = 235
Score = 77.0 bits (181), Expect = 5e-13
Identities = 43/130 (33%), Positives = 68/130 (52%), Gaps = 1/130 (0%)
Frame = +1
Query: 247 IPFQRLYFDLTGTETKSNSVTVQSLPNVSSIIKGYRDAYLVNLEAVVFPSAPSLKIPVTV 426
+PFQ +++DLT ET S+ + S P S+ Y A L +LE VFP PS P++
Sbjct: 71 LPFQFIFYDLTNAETGFTSLDLASKPPFLSLTSPYAYAVLQSLELTVFPKNPSYTYPMSF 130
Query: 427 DLCWTTADVTVEGVNLLATPSSSRITIGG-LALMHQATLPCDLGLHQPDHQIPRFHTPTT 603
D W ++ V++ G +L+T +R+T GG + + LP DL P + + T
Sbjct: 131 DAHWHSSSVSITGSQILSTYGGTRVTFGGPITSSNPIILPADLRSTNPVVKDTVSYN-NT 189
Query: 604 PXLNIHFHQS 633
P L + FH++
Sbjct: 190 PKLTVAFHKN 199
>UniRef50_Q9IW08 Cluster: Replicase-associated protein; n=10;
Tymoviridae|Rep: Replicase-associated protein -
Poinsettia mosaic virus
Length = 1987
Score = 61.3 bits (142), Expect = 3e-08
Identities = 34/107 (31%), Positives = 53/107 (49%)
Frame = +1
Query: 247 IPFQRLYFDLTGTETKSNSVTVQSLPNVSSIIKGYRDAYLVNLEAVVFPSAPSLKIPVTV 426
+PFQ + D+ + + + ++S I YR A L L+A+V P+A S + P+T+
Sbjct: 1820 VPFQTVAMDVVAAGGNA-TFNLAGHVSLSEITAPYRKARLAELKAIVCPTAASFQSPITL 1878
Query: 427 DLCWTTADVTVEGVNLLATPSSSRITIGGLALMHQATLPCDLGLHQP 567
DL W+T +V + +L +R IGG L H L DL P
Sbjct: 1879 DLVWSTNNVIFTDLQILQVYGGTRFAIGGPLLSHTYELRADLSYLNP 1925
>UniRef50_P20124 Cluster: Coat protein; n=10; Tymovirus|Rep: Coat
protein - Ononis yellow mosaic virus
Length = 192
Score = 61.3 bits (142), Expect = 3e-08
Identities = 32/91 (35%), Positives = 50/91 (54%)
Frame = +1
Query: 241 LIIPFQRLYFDLTGTETKSNSVTVQSLPNVSSIIKGYRDAYLVNLEAVVFPSAPSLKIPV 420
+++PFQ DL G S +T+ S P ++ + YR A +V EAV+FP++ S K PV
Sbjct: 32 MVVPFQVSVSDL-GVSEVSAQITLSSDPTLAQLTSIYRMASIVECEAVLFPNSTSSKNPV 90
Query: 421 TVDLCWTTADVTVEGVNLLATPSSSRITIGG 513
DL W ++ + +L T +R T+GG
Sbjct: 91 HCDLIWVPSNSSASPKTILQTYGGNRFTVGG 121
>UniRef50_P35927 Cluster: Coat protein; n=2; Erysimum latent
virus|Rep: Coat protein - Erysimum latent virus (ELV)
Length = 202
Score = 54.8 bits (126), Expect = 2e-06
Identities = 30/88 (34%), Positives = 46/88 (52%)
Frame = +1
Query: 250 PFQRLYFDLTGTETKSNSVTVQSLPNVSSIIKGYRDAYLVNLEAVVFPSAPSLKIPVTVD 429
PFQ F L + S ++ + + P +++ + +R A L L AVV PSA S+ P+TV
Sbjct: 46 PFQ-FEFPLPAGQEGSVTLPLATFPKMATFLSRHRRAQLTQLHAVVSPSAVSIGHPLTVQ 104
Query: 430 LCWTTADVTVEGVNLLATPSSSRITIGG 513
L W A T +L T +I++GG
Sbjct: 105 LIWVPASSTTTSSQILGTYGGQQISVGG 132
>UniRef50_Q3HWZ1 Cluster: Polyprotein; n=7; Citrus sudden
death-associated virus|Rep: Polyprotein - Citrus sudden
death-associated virus
Length = 2189
Score = 52.8 bits (121), Expect = 9e-06
Identities = 30/102 (29%), Positives = 48/102 (47%), Gaps = 1/102 (0%)
Frame = +1
Query: 250 PFQRLYFDLTGTETKSNSVTVQSLPNVSSIIKGYRDAYLVNLEAVVFPSAPSLKIPVTVD 429
PFQ + G+E K+ S + ++ ++ YR A L ++E V P A + P++V
Sbjct: 2034 PFQWVVASYDGSEAKNLSDDLSGSATLTKVMANYRHAELTSVELEVCPLAAAFSKPISVS 2093
Query: 430 LCWTTADVTVEGVNLLATPSSSRITIGGLALMHQAT-LPCDL 552
WT A ++ + + T+GG LM T LP DL
Sbjct: 2094 AVWTIASISPASASETSYYGGRLFTVGGPVLMSSTTHLPADL 2135
>UniRef50_Q8QY74 Cluster: Coat protein; n=1; Passion fruit yellow
mosaic virus|Rep: Coat protein - Passion fruit yellow
mosaic virus
Length = 188
Score = 52.0 bits (119), Expect = 2e-05
Identities = 42/137 (30%), Positives = 62/137 (45%), Gaps = 7/137 (5%)
Frame = +1
Query: 247 IPFQRLYFDLTGTETKSNSVTVQSLPNVSSIIKGYRDAYLVNLEAVVFPSAPSLKIPVTV 426
+PFQ L GT S+SV++ + VSS+ YR A L +L A + P+ S P TV
Sbjct: 37 LPFQTKLASL-GTAEVSDSVSIAANAAVSSLATPYRHARLTSLVATIHPNHLSPSNPTTV 95
Query: 427 DLCWTTADVTVEGVNLLATPSSSRITIGG-LALMHQATLPCDLGLHQP---DHQIP---R 585
L W + T ++L IGG + + ++PC+L P ++P R
Sbjct: 96 SLVWVPFNSTATSSDILNVFGGQSFCIGGAVNSLAAISVPCNLTNVNPVIKSSKLPPSHR 155
Query: 586 FHTPTTPXLNIHFHQSP 636
+TP L H SP
Sbjct: 156 LFPNSTPRLPAHRSSSP 172
>UniRef50_O89519 Cluster: Virion protein; n=2; Tymovirus|Rep: Virion
protein - Dulcamara mottle virus
Length = 188
Score = 48.4 bits (110), Expect = 2e-04
Identities = 26/84 (30%), Positives = 43/84 (51%), Gaps = 1/84 (1%)
Frame = +1
Query: 304 VTVQSLPNVSSIIKGYRDAYLVNLEAVVFPSAPSLKIPVTVDLCWTTADVTVEGVNLLAT 483
V++ + +++ + GYR A LV L + P+ ++ PVTVD+ W A+ T +L+
Sbjct: 52 VSLSASESLAKLTAGYRRAKLVELFLTITPTQLAIDNPVTVDVVWVPANSTATPSKILSV 111
Query: 484 PSSSRITIGGLALMHQA-TLPCDL 552
R IGG Q +PC+L
Sbjct: 112 YGGQRFLIGGTLTTSQVIRVPCNL 135
>UniRef50_P03608 Cluster: Coat protein; n=21; Turnip yellow mosaic
virus|Rep: Coat protein - Turnip yellow mosaic virus
Length = 189
Score = 47.6 bits (108), Expect = 4e-04
Identities = 29/107 (27%), Positives = 48/107 (44%), Gaps = 1/107 (0%)
Frame = +1
Query: 250 PFQRLYFDLTGTETKSNSVTVQSLPNVSSIIKGYRDAYLVNLEAVVFPSAPSLKIPVTVD 429
PFQ GT+ S+T+ ++ +VS++ YR A L +L + P+ + P TV
Sbjct: 34 PFQSEVL-FAGTKDAEASLTIANIDSVSTLTTFYRHASLESLWVTIHPTLQAPTFPTTVG 92
Query: 430 LCWTTADVTVEGVNLLATPSSSRITIGG-LALMHQATLPCDLGLHQP 567
+CW A+ V + T IGG + + + C L + P
Sbjct: 93 VCWVPANSPVTPAQITKTYGGQIFCIGGAINTLSPLIVKCPLEMMNP 139
>UniRef50_O89518 Cluster: Virion protein; n=1; Wild cucumber mosaic
virus|Rep: Virion protein - Wild cucumber mosaic virus
Length = 188
Score = 46.8 bits (106), Expect = 6e-04
Identities = 25/93 (26%), Positives = 47/93 (50%)
Frame = +1
Query: 280 GTETKSNSVTVQSLPNVSSIIKGYRDAYLVNLEAVVFPSAPSLKIPVTVDLCWTTADVTV 459
G + S+ +++ S P + + +R A L++ +A++ P + +P+TVDL W +A+
Sbjct: 44 GPKEVSSQISLSSCPELLRLTSLFRHARLLSAKAIITPFDGVVSLPITVDLAWVSANSPA 103
Query: 460 EGVNLLATPSSSRITIGGLALMHQATLPCDLGL 558
++L S T GG +T P +L L
Sbjct: 104 SPTDILKIYGGSSYTFGGAI---NSTRPIELPL 133
>UniRef50_P89920 Cluster: Replicase-associated polyprotein; n=5; Oat
blue dwarf virus|Rep: Replicase-associated polyprotein -
Oat blue dwarf virus
Length = 2066
Score = 46.4 bits (105), Expect = 8e-04
Identities = 29/103 (28%), Positives = 44/103 (42%), Gaps = 1/103 (0%)
Frame = +1
Query: 247 IPFQRLYFDLTGTETKSNSVTVQSLPNVSSIIKGYRDAYLVNLEAVVFPSAPSLKIPVTV 426
+PFQ G K + + ++S + GYR A L++ E P A + P++V
Sbjct: 1908 VPFQWAVASYAGDSAKFLTDDLSGSSHLSRLTIGYRHAELISAELEFAPLAAAFAKPISV 1967
Query: 427 DLCWTTADVTVEGVNLLATPSSSRITIGGLALMHQAT-LPCDL 552
WT A + L +T+GG LM T +P DL
Sbjct: 1968 TAVWTIASIAPATTTELQYYGGRLLTLGGPVLMGSVTRIPADL 2010
>UniRef50_P19128 Cluster: Coat protein; n=9; Tymovirus|Rep: Coat
protein - Cacao yellow mosaic virus
Length = 188
Score = 42.7 bits (96), Expect = 0.010
Identities = 25/105 (23%), Positives = 47/105 (44%), Gaps = 1/105 (0%)
Frame = +1
Query: 241 LIIPFQRLYFDLTGTETKSNSVTVQSLPNVSSIIKGYRDAYLVNLEAVVFPSAPSLKIPV 420
++ PFQ L G E ++ V++ + +++ YR A L +L+A++ P+ + P
Sbjct: 31 IVYPFQFTIASL-GVEPTADFVSIAAQAAITAYTSLYRHAILTDLQAIIHPNGYAPAFPT 89
Query: 421 TVDLCWTTADVTVEGVNLLATPSSSRITIGG-LALMHQATLPCDL 552
+V L W + T +L +GG + +PC L
Sbjct: 90 SVALAWVPYNSTATAAKILDVFGGQEFCVGGSINSTSPIIVPCPL 134
>UniRef50_P15158 Cluster: Coat protein; n=9; Tymovirus|Rep: Coat
protein - Belladonna mottle virus (BMDV)
Length = 190
Score = 40.3 bits (90), Expect = 0.054
Identities = 34/129 (26%), Positives = 60/129 (46%), Gaps = 5/129 (3%)
Frame = +1
Query: 241 LIIPFQRLYFDLT--GTETKSNSVTVQSLPNVSSIIKGYRDAYLVNLEAVVFPSAPSLKI 414
+++PFQ F+ T GT + V++Q+ ++ + YR A +V +A++ P+ ++
Sbjct: 32 IVLPFQ---FEATTFGTAETAAQVSLQTADPITKLTAPYRHAQIVECKAILTPTDLAVSN 88
Query: 415 PVTVDLCWTTAD--VTVEGVNLLATPSSSRITIGGLALMHQATLPCDLGLHQPDHQIPRF 588
P+TV L W A+ T + L +GG A+ T+ L L + +
Sbjct: 89 PLTVYLAWVPANSPATPTQILKLRVYGGQSFVLGG-AISAAKTIEVPLNLDSVNRMLKDS 147
Query: 589 HTPT-TPXL 612
T T TP L
Sbjct: 148 VTYTDTPKL 156
>UniRef50_Q6CCA2 Cluster: Similarity; n=1; Yarrowia lipolytica|Rep:
Similarity - Yarrowia lipolytica (Candida lipolytica)
Length = 911
Score = 36.3 bits (80), Expect = 0.88
Identities = 23/89 (25%), Positives = 36/89 (40%)
Frame = +1
Query: 271 DLTGTETKSNSVTVQSLPNVSSIIKGYRDAYLVNLEAVVFPSAPSLKIPVTVDLCWTTAD 450
DLT T T + + + A + A++ P+A +L +P DL T D
Sbjct: 515 DLTTTATDLTTTATDLTTTATDLTVPTVTALMETATALMVPTATALMVPTATDLTTTATD 574
Query: 451 VTVEGVNLLATPSSSRITIGGLALMHQAT 537
+T T + + +T ALM AT
Sbjct: 575 LTTTATATDLTTTVTDLTTTATALMETAT 603
Score = 35.1 bits (77), Expect = 2.0
Identities = 20/81 (24%), Positives = 39/81 (48%)
Frame = +1
Query: 295 SNSVTVQSLPNVSSIIKGYRDAYLVNLEAVVFPSAPSLKIPVTVDLCWTTADVTVEGVNL 474
+ + T ++P V+++++ + A++ P+A L +P DL T D+T L
Sbjct: 662 TTTATDLTVPTVTALMETATALMVPTATALMVPTATDLMVPTATDLTTTVTDLTTTATAL 721
Query: 475 LATPSSSRITIGGLALMHQAT 537
+ T ++ + ALM AT
Sbjct: 722 METATALTVPT-ATALMETAT 741
>UniRef50_Q5JJ70 Cluster: Hypothetical membrane protein, conserved;
n=1; Thermococcus kodakarensis KOD1|Rep: Hypothetical
membrane protein, conserved - Pyrococcus kodakaraensis
(Thermococcus kodakaraensis)
Length = 541
Score = 35.9 bits (79), Expect = 1.2
Identities = 20/59 (33%), Positives = 31/59 (52%)
Frame = +1
Query: 325 NVSSIIKGYRDAYLVNLEAVVFPSAPSLKIPVTVDLCWTTADVTVEGVNLLATPSSSRI 501
NVS +KG ++ Y V+ VV P SL + +D ++ + TVE +T S SR+
Sbjct: 180 NVSLSVKGVKELYSVSKSMVVAPGYSSLVFEIPIDSKYSEGEYTVELAVRCSTTSVSRL 238
>UniRef50_UPI0000F1DDC7 Cluster: PREDICTED: hypothetical protein;
n=1; Danio rerio|Rep: PREDICTED: hypothetical protein -
Danio rerio
Length = 735
Score = 35.5 bits (78), Expect = 1.5
Identities = 23/59 (38%), Positives = 27/59 (45%), Gaps = 8/59 (13%)
Frame = +3
Query: 486 FILSHYYWRSRPYASSHPPLRSRATSTRSSNPPIP----YTN----HPXT*HPFPSIPL 638
F+L H+Y PY H P R R+ P+P Y N HP T H FPS PL
Sbjct: 246 FLLPHHYSNQHPYPQHHVPFSLRHHHPRTPG-PLPQIGHYGNSPPVHPSTLHCFPSRPL 303
>UniRef50_A2QQ18 Cluster: Similarity to hypothetical protein
AD11338.1 - Neurospora crassa; n=3; Trichocomaceae|Rep:
Similarity to hypothetical protein AD11338.1 -
Neurospora crassa - Aspergillus niger
Length = 411
Score = 34.7 bits (76), Expect = 2.7
Identities = 28/87 (32%), Positives = 33/87 (37%)
Frame = +3
Query: 465 SQSAGHPFILSHYYWRSRPYASSHPPLRSRATSTRSSNPPIPYTNHPXT*HPFPSIPLTP 644
S S+ HP R + S TS+ SS PP PY HP T PS P T
Sbjct: 276 SPSSPHPHQHLTQTMNKRQDQDKYSSTPSSPTSSPSSTPPQPYPAHPPTDSHTPSSP-TS 334
Query: 645 YXKGLRXXGLKPSRWXXXXLXSXVSHP 725
G PSR L ++HP
Sbjct: 335 RPPGSSDVSKSPSR--RVSLPGLLAHP 359
>UniRef50_A2QPM0 Cluster: Putative uncharacterized protein; n=1;
Aspergillus niger|Rep: Putative uncharacterized protein
- Aspergillus niger
Length = 391
Score = 34.7 bits (76), Expect = 2.7
Identities = 21/52 (40%), Positives = 25/52 (48%), Gaps = 2/52 (3%)
Frame = +3
Query: 498 HYYWRSRPYASSHPPLRSRATSTRSS--NPPIPYTNHPXT*HPFPSIPLTPY 647
H+ RP PP S +TST +S PP P T P P PS P TP+
Sbjct: 89 HHQLPHRPPTPPPPPPASTSTSTSTSIPTPPAPTTTQPPFPFPSPS-PFTPH 139
>UniRef50_Q2J7J5 Cluster: Putative uncharacterized protein; n=3;
Frankia sp. CcI3|Rep: Putative uncharacterized protein -
Frankia sp. (strain CcI3)
Length = 366
Score = 34.3 bits (75), Expect = 3.6
Identities = 16/44 (36%), Positives = 23/44 (52%), Gaps = 2/44 (4%)
Frame = +3
Query: 564 TRSSNPPI--PYTNHPXT*HPFPSIPLTPYXKGLRXXGLKPSRW 689
T + +PP+ P +HP P P+ P TP+ G R G +P W
Sbjct: 155 TSNGHPPVTGPPPDHPAGAAPTPAPPATPHTHGHRHAGPRPGGW 198
>UniRef50_Q5KNL7 Cluster: ARF guanyl-nucleotide exchange factor,
putative; n=2; Filobasidiella neoformans|Rep: ARF
guanyl-nucleotide exchange factor, putative -
Cryptococcus neoformans (Filobasidiella neoformans)
Length = 1811
Score = 33.5 bits (73), Expect = 6.2
Identities = 21/49 (42%), Positives = 26/49 (53%), Gaps = 1/49 (2%)
Frame = +3
Query: 510 RSRPYASSHPPLRSRATSTRS-SNPPIPYTNHPXT*HPFPSIPLTPYXK 653
RSR + S P RS + S +S S PP+P + PFPS P TP K
Sbjct: 318 RSRSVSRSRPSSRSPSVSVQSPSPPPVPLKPQSVS-SPFPSRPGTPNHK 365
>UniRef50_Q2HEG7 Cluster: Putative uncharacterized protein; n=1;
Chaetomium globosum|Rep: Putative uncharacterized
protein - Chaetomium globosum (Soil fungus)
Length = 831
Score = 33.5 bits (73), Expect = 6.2
Identities = 13/43 (30%), Positives = 23/43 (53%)
Frame = +3
Query: 483 PFILSHYYWRSRPYASSHPPLRSRATSTRSSNPPIPYTNHPXT 611
PF+L + P++++HP R ++ S+ + Y NHP T
Sbjct: 637 PFVLKPTFPYGSPHSATHPSPPGRPLDSQMSHSQVSYINHPLT 679
>UniRef50_UPI0000EBDE86 Cluster: PREDICTED: hypothetical protein;
n=1; Bos taurus|Rep: PREDICTED: hypothetical protein -
Bos taurus
Length = 296
Score = 33.1 bits (72), Expect = 8.2
Identities = 17/53 (32%), Positives = 24/53 (45%)
Frame = +3
Query: 483 PFILSHYYWRSRPYASSHPPLRSRATSTRSSNPPIPYTNHPXT*HPFPSIPLT 641
P + SH W P++ S R+ T + P+T +P T P P PLT
Sbjct: 13 PSLRSHSPWSPSPWSPSPRSPSPRSPLTTEPHSTEPHTQNPSTQSPSPQSPLT 65
>UniRef50_Q0LKT7 Cluster: Cytochrome b/b6-like; n=1; Herpetosiphon
aurantiacus ATCC 23779|Rep: Cytochrome b/b6-like -
Herpetosiphon aurantiacus ATCC 23779
Length = 562
Score = 33.1 bits (72), Expect = 8.2
Identities = 21/50 (42%), Positives = 28/50 (56%), Gaps = 2/50 (4%)
Frame = +1
Query: 361 YLVNLEAVVFPSAPS--LKIPVTVDLCWTTADVTVEGVNLLATPSSSRIT 504
Y + +A F +A L+ VT+D+ WTTA EG NL+ TP SR T
Sbjct: 494 YQQDTDAAGFSTAVDGILQKRVTLDMEWTTAGYDAEG-NLVETPEKSRYT 542
>UniRef50_Q01H49 Cluster: Chromosome 01 contig 1, DNA sequence; n=1;
Ostreococcus tauri|Rep: Chromosome 01 contig 1, DNA
sequence - Ostreococcus tauri
Length = 272
Score = 33.1 bits (72), Expect = 8.2
Identities = 22/73 (30%), Positives = 29/73 (39%), Gaps = 1/73 (1%)
Frame = +3
Query: 510 RSRPYASSHPPLRSRATSTRSSNPPIPYTNHPXT*HPFPSI-PLTPYXKGLRXXGLKPSR 686
R R +S P R + PP P HP T PFPSI P+ + +R + SR
Sbjct: 75 RERAQSSPRVPHLRRDRHAHAQRPPSPRIAHPSTSSPFPSIAPVVRVVRLIRVRFERQSR 134
Query: 687 WXXXXLXSXVSHP 725
+S P
Sbjct: 135 ASVGVAARIISRP 147
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 697,967,462
Number of Sequences: 1657284
Number of extensions: 13642614
Number of successful extensions: 41946
Number of sequences better than 10.0: 25
Number of HSP's better than 10.0 without gapping: 38655
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 41762
length of database: 575,637,011
effective HSP length: 99
effective length of database: 411,565,895
effective search space used: 67496806780
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -