Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP11_FL5_G19
(793 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
07_01_0373 + 2783596-2784933 31 0.79
01_06_0146 + 26969011-26969995,26970878-26970930 31 1.4
08_01_0256 + 2102044-2102883,2104208-2104741,2104838-2104945 29 4.2
02_01_0219 - 1437685-1437723,1437932-1438091,1438385-1438514,143... 29 4.2
07_03_1284 + 25463476-25463557,25465088-25465220,25465307-254653... 29 5.6
04_01_0041 - 464695-464850,467485-469029 29 5.6
03_06_0648 + 35280492-35280645,35281742-35281820,35282491-352825... 29 5.6
02_04_0486 - 23351960-23353093 29 5.6
02_04_0483 - 23305492-23306625 29 5.6
01_07_0117 + 41171919-41172395 29 5.6
01_05_0227 - 19512866-19514983 29 5.6
04_04_1682 + 35332907-35333720,35334583-35335202 28 7.4
01_06_1682 - 39130696-39131705,39132355-39132583 28 7.4
01_06_0654 + 30911416-30912071,30913664-30914348 28 7.4
10_01_0100 + 1209424-1209538,1210373-1211073,1211158-1211379,121... 28 9.8
02_05_0814 - 31970558-31971126,31971242-31971413 28 9.8
02_05_0788 + 31758119-31758384,31758482-31758634,31759385-317595... 28 9.8
>07_01_0373 + 2783596-2784933
Length = 445
Score = 31.5 bits (68), Expect = 0.79
Identities = 12/28 (42%), Positives = 21/28 (75%)
Frame = -3
Query: 92 EEEKALTKEGMAEAAETXKGTISSMNRS 9
E+++ LTK G + +ET KG++ S++RS
Sbjct: 151 EQQQQLTKSGCSSTSETSKGSVLSLSRS 178
>01_06_0146 + 26969011-26969995,26970878-26970930
Length = 345
Score = 30.7 bits (66), Expect = 1.4
Identities = 17/48 (35%), Positives = 23/48 (47%), Gaps = 2/48 (4%)
Frame = +3
Query: 519 PYASSHPPLR--SRATSTRSSNPPIPYTNHPXT*HPFPSIPLTPYXKG 656
P A PPL +R R++ PP P + P P PS+P +P G
Sbjct: 82 PTADPSPPLPHDNRTPQPRAAPPPAPAPDQPAPPSPPPSLPPSPPAPG 129
>08_01_0256 + 2102044-2102883,2104208-2104741,2104838-2104945
Length = 493
Score = 29.1 bits (62), Expect = 4.2
Identities = 12/25 (48%), Positives = 16/25 (64%)
Frame = +3
Query: 516 RPYASSHPPLRSRATSTRSSNPPIP 590
RP+ S PPL + AT+TR + P P
Sbjct: 33 RPHPSPPPPLLATATATRRDDEPAP 57
>02_01_0219 -
1437685-1437723,1437932-1438091,1438385-1438514,
1438627-1438696,1439264-1439407,1439771-1439837,
1439970-1440019,1440386-1440559,1440881-1440934,
1441008-1441112
Length = 330
Score = 29.1 bits (62), Expect = 4.2
Identities = 25/85 (29%), Positives = 38/85 (44%), Gaps = 2/85 (2%)
Frame = +1
Query: 283 TETKSNSVTVQSLPNVSSIIKGYRDAYLVNLEAVVFPSAPSL--KIPVTVDLCWTTADVT 456
TE +N V V L SS GY D + ++ V + K+ V +D TAD++
Sbjct: 167 TEAGANRVLVCDLH--SSQAMGYFDIPVDHVYGQVMNLIGDVRGKVAVMMDDMIDTADIS 224
Query: 457 VEGVNLLATPSSSRITIGGLALMHQ 531
+ +N+L P G L+HQ
Sbjct: 225 LPNINILMKPIKLGTIAKGAELLHQ 249
>07_03_1284 +
25463476-25463557,25465088-25465220,25465307-25465378,
25465476-25465544,25465629-25465700,25465792-25465860,
25466155-25466220,25466299-25466364,25466452-25466786,
25466931-25467214,25467796-25468067,25468152-25468287,
25468625-25468755,25468890-25469046,25469185-25469327,
25470105-25470190,25471530-25472962,25474563-25474712,
25475221-25475322,25475467-25475568
Length = 1319
Score = 28.7 bits (61), Expect = 5.6
Identities = 17/37 (45%), Positives = 21/37 (56%), Gaps = 1/37 (2%)
Frame = +2
Query: 533 PPSPAISG-YINPIIKSPDSIHQPPPXLTSISINPPD 640
PP P S Y +P KSP S QP P T+++ NP D
Sbjct: 223 PPPPYQSPPYKSPPYKSPQSR-QPAPPTTTVNNNPSD 258
>04_01_0041 - 464695-464850,467485-469029
Length = 566
Score = 28.7 bits (61), Expect = 5.6
Identities = 18/63 (28%), Positives = 32/63 (50%), Gaps = 1/63 (1%)
Frame = +1
Query: 244 IIPFQRLYFDLTGTETKSNSVTVQSLPNVSSIIKGYRDAYLVNLEAVVFPS-APSLKIPV 420
+I R + D++ T +SN + V +LP VSS + Y D ++ + P P ++ V
Sbjct: 40 LISVFRPFTDVSLTLCRSNYIGVTNLPIVSSECEAYYDDFVSGADFTARPQVVPPWRLAV 99
Query: 421 TVD 429
+D
Sbjct: 100 PLD 102
>03_06_0648 +
35280492-35280645,35281742-35281820,35282491-35282593,
35282695-35282815,35283144-35283232,35283324-35283473,
35285842-35287161
Length = 671
Score = 28.7 bits (61), Expect = 5.6
Identities = 17/57 (29%), Positives = 23/57 (40%)
Frame = +2
Query: 434 VGLLLTSQLKESICWXXXXXXXXXXXXXXXCIKPPSPAISGYINPIIKSPDSIHQPP 604
VG + S+ ES CW P P+ SG +PI +S S+ PP
Sbjct: 245 VGRKVVSEAPESYCWLVLTKLGDSMIKQILGRFPKKPSKSGDKDPIGRSSPSVPNPP 301
>02_04_0486 - 23351960-23353093
Length = 377
Score = 28.7 bits (61), Expect = 5.6
Identities = 13/27 (48%), Positives = 15/27 (55%)
Frame = +1
Query: 436 WTTADVTVEGVNLLATPSSSRITIGGL 516
W D VEG LLA P S+ + GGL
Sbjct: 172 WELTDFDVEGPQLLAAPISNPVLHGGL 198
>02_04_0483 - 23305492-23306625
Length = 377
Score = 28.7 bits (61), Expect = 5.6
Identities = 13/27 (48%), Positives = 15/27 (55%)
Frame = +1
Query: 436 WTTADVTVEGVNLLATPSSSRITIGGL 516
W D VEG LLA P S+ + GGL
Sbjct: 172 WELTDFDVEGPQLLAAPISNPVLHGGL 198
>01_07_0117 + 41171919-41172395
Length = 158
Score = 28.7 bits (61), Expect = 5.6
Identities = 23/78 (29%), Positives = 36/78 (46%), Gaps = 9/78 (11%)
Frame = +2
Query: 527 IKPPSPAISGYINPIIKSP-----DSIHQPPPXLTSISINP----PDXVLXGTSXXGFKA 679
+ PP+PA+S I P++ SP S P + +I +P PD +L ++ F +
Sbjct: 62 VLPPAPALSPDIMPLLPSPGPDSDGSAEAPSDVMPTIPSSPSPPNPDALLPDSALAPFGS 121
Query: 680 LPXXXXXAPXXRXSPPSS 733
P A R PPS+
Sbjct: 122 AP---AVAAQSRAPPPST 136
>01_05_0227 - 19512866-19514983
Length = 705
Score = 28.7 bits (61), Expect = 5.6
Identities = 11/31 (35%), Positives = 19/31 (61%)
Frame = -3
Query: 461 STVTSAVVQQRSTVTGILRLGAEGKTTASRL 369
S +T + +QQ + ++ LG GKTT ++L
Sbjct: 18 SKLTESSIQQNIKIVSVIGLGGSGKTTLAKL 48
>04_04_1682 + 35332907-35333720,35334583-35335202
Length = 477
Score = 28.3 bits (60), Expect = 7.4
Identities = 15/28 (53%), Positives = 16/28 (57%), Gaps = 2/28 (7%)
Frame = +1
Query: 496 RITIGGLALM--HQATLPCDLGLHQPDH 573
R T G L+ H ATL CDLGLH H
Sbjct: 337 RCTADGNELLRFHCATLSCDLGLHGATH 364
>01_06_1682 - 39130696-39131705,39132355-39132583
Length = 412
Score = 28.3 bits (60), Expect = 7.4
Identities = 12/43 (27%), Positives = 18/43 (41%)
Frame = +3
Query: 519 PYASSHPPLRSRATSTRSSNPPIPYTNHPXT*HPFPSIPLTPY 647
PY PP ++ + P P+ P H +PS P + Y
Sbjct: 193 PYQYPSPPFNYKSPPLPNQFSPPPFNKFPPPSHQYPSPPQSSY 235
>01_06_0654 + 30911416-30912071,30913664-30914348
Length = 446
Score = 28.3 bits (60), Expect = 7.4
Identities = 17/43 (39%), Positives = 21/43 (48%)
Frame = +1
Query: 472 LLATPSSSRITIGGLALMHQATLPCDLGLHQPDHQIPRFHTPT 600
LL PS R + G A +H +T PC LH DH H+ T
Sbjct: 15 LLKLPSVPRPS-SGAAGVHPSTSPCFCTLHLQDHPSAGSHSRT 56
>10_01_0100 +
1209424-1209538,1210373-1211073,1211158-1211379,
1211452-1211878,1212091-1213219,1213623-1213746,
1214207-1214278,1215480-1215578,1215617-1215640,
1215704-1215745,1215815-1215895,1215983-1216114,
1216115-1216196,1216271-1216365,1218499-1218570,
1218676-1218792,1219379-1219447,1219521-1219587,
1219886-1220025
Length = 1269
Score = 27.9 bits (59), Expect = 9.8
Identities = 13/35 (37%), Positives = 17/35 (48%)
Frame = +2
Query: 533 PPSPAISGYINPIIKSPDSIHQPPPXLTSISINPP 637
PP P N ++ SP PPP L + S+ PP
Sbjct: 586 PPPPPPPPLPNCLVPSPPPPPPPPPILPNRSVPPP 620
>02_05_0814 - 31970558-31971126,31971242-31971413
Length = 246
Score = 27.9 bits (59), Expect = 9.8
Identities = 16/43 (37%), Positives = 21/43 (48%)
Frame = +3
Query: 513 SRPYASSHPPLRSRATSTRSSNPPIPYTNHPXT*HPFPSIPLT 641
S P + S P + ST + P P T P T P+PS P+T
Sbjct: 142 STPSSPSSPTPTTPNPSTPTPTTPYPSTPMPTT--PYPSTPMT 182
>02_05_0788 +
31758119-31758384,31758482-31758634,31759385-31759509,
31759650-31759678,31760943-31761008,31761059-31761125,
31761226-31761370,31761404-31761451,31762014-31762182,
31762645-31762779,31762858-31763064,31763608-31763735,
31763815-31763866,31764046-31764060,31764502-31764609
Length = 570
Score = 27.9 bits (59), Expect = 9.8
Identities = 21/86 (24%), Positives = 36/86 (41%)
Frame = +1
Query: 235 QRLIIPFQRLYFDLTGTETKSNSVTVQSLPNVSSIIKGYRDAYLVNLEAVVFPSAPSLKI 414
Q I + ++ L N TV + N + GY+ +N+ + PSLK
Sbjct: 198 QVFCIVLEMFFYQLLQLLKVPNEKTVNVIENAIQTLPGYQPPKHINIGEYISSHVPSLK- 256
Query: 415 PVTVDLCWTTADVTVEGVNLLATPSS 492
D C T ++ +EG++ L S+
Sbjct: 257 ----DFCEPTVEM-LEGMSALKALST 277
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,860,863
Number of Sequences: 37544
Number of extensions: 420869
Number of successful extensions: 1327
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 1233
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1318
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2138915688
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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