Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP11_FL5_G19
(793 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
X89894-1|CAA61984.1| 443|Homo sapiens nuclear receptor protein. 31 3.6
S81243-1|AAB36006.1| 684|Homo sapiens CHN protein. 31 3.6
D78579-1|BAA11419.1| 626|Homo sapiens neuron derived orphan rec... 31 3.6
AL359710-3|CAI95139.1| 443|Homo sapiens nuclear receptor subfam... 31 3.6
AL359710-2|CAI95138.1| 626|Homo sapiens nuclear receptor subfam... 31 3.6
AL359710-1|CAM16648.1| 637|Homo sapiens nuclear receptor subfam... 31 3.6
AL358937-4|CAI95320.1| 626|Homo sapiens nuclear receptor subfam... 31 3.6
AL358937-3|CAM22558.1| 637|Homo sapiens nuclear receptor subfam... 31 3.6
AY024361-1|AAK00583.1| 4911|Homo sapiens MLL3 protein. 31 4.8
AF264750-1|AAF74766.2| 4025|Homo sapiens ALR-like protein protein. 31 4.8
AC006474-1|AAS00364.1| 2185|Homo sapiens unknown protein. 31 4.8
AB040939-1|BAA96030.2| 3310|Homo sapiens KIAA1506 protein protein. 31 4.8
Z36714-1|CAA85308.1| 786|Homo sapiens cyclin F protein. 30 8.3
AK128329-1|BAC87386.1| 172|Homo sapiens protein ( Homo sapiens ... 30 8.3
>X89894-1|CAA61984.1| 443|Homo sapiens nuclear receptor protein.
Length = 443
Score = 31.5 bits (68), Expect = 3.6
Identities = 16/54 (29%), Positives = 28/54 (51%)
Frame = +1
Query: 253 FQRLYFDLTGTETKSNSVTVQSLPNVSSIIKGYRDAYLVNLEAVVFPSAPSLKI 414
+ +L DL TE + + T SLP++S+ ++GY Y + V P +K+
Sbjct: 35 YTKLTMDLGSTEITATATT--SLPSISTFVEGYSSNYELKPSCVYQMQRPLIKV 86
>S81243-1|AAB36006.1| 684|Homo sapiens CHN protein.
Length = 684
Score = 31.5 bits (68), Expect = 3.6
Identities = 16/54 (29%), Positives = 28/54 (51%)
Frame = +1
Query: 253 FQRLYFDLTGTETKSNSVTVQSLPNVSSIIKGYRDAYLVNLEAVVFPSAPSLKI 414
+ +L DL TE + + T SLP++S+ ++GY Y + V P +K+
Sbjct: 93 YTKLTMDLGSTEITATATT--SLPSISTFVEGYSSNYELKPSCVYQMQRPLIKV 144
>D78579-1|BAA11419.1| 626|Homo sapiens neuron derived orphan
receptor protein.
Length = 626
Score = 31.5 bits (68), Expect = 3.6
Identities = 16/54 (29%), Positives = 28/54 (51%)
Frame = +1
Query: 253 FQRLYFDLTGTETKSNSVTVQSLPNVSSIIKGYRDAYLVNLEAVVFPSAPSLKI 414
+ +L DL TE + + T SLP++S+ ++GY Y + V P +K+
Sbjct: 35 YTKLTMDLGSTEITATATT--SLPSISTFVEGYSSNYELKPSCVYQMQRPLIKV 86
>AL359710-3|CAI95139.1| 443|Homo sapiens nuclear receptor subfamily
4, group A, member 3 protein.
Length = 443
Score = 31.5 bits (68), Expect = 3.6
Identities = 16/54 (29%), Positives = 28/54 (51%)
Frame = +1
Query: 253 FQRLYFDLTGTETKSNSVTVQSLPNVSSIIKGYRDAYLVNLEAVVFPSAPSLKI 414
+ +L DL TE + + T SLP++S+ ++GY Y + V P +K+
Sbjct: 35 YTKLTMDLGSTEITATATT--SLPSISTFVEGYSSNYELKPSCVYQMQRPLIKV 86
>AL359710-2|CAI95138.1| 626|Homo sapiens nuclear receptor subfamily
4, group A, member 3 protein.
Length = 626
Score = 31.5 bits (68), Expect = 3.6
Identities = 16/54 (29%), Positives = 28/54 (51%)
Frame = +1
Query: 253 FQRLYFDLTGTETKSNSVTVQSLPNVSSIIKGYRDAYLVNLEAVVFPSAPSLKI 414
+ +L DL TE + + T SLP++S+ ++GY Y + V P +K+
Sbjct: 35 YTKLTMDLGSTEITATATT--SLPSISTFVEGYSSNYELKPSCVYQMQRPLIKV 86
>AL359710-1|CAM16648.1| 637|Homo sapiens nuclear receptor subfamily
4, group A, member 3 protein.
Length = 637
Score = 31.5 bits (68), Expect = 3.6
Identities = 16/54 (29%), Positives = 28/54 (51%)
Frame = +1
Query: 253 FQRLYFDLTGTETKSNSVTVQSLPNVSSIIKGYRDAYLVNLEAVVFPSAPSLKI 414
+ +L DL TE + + T SLP++S+ ++GY Y + V P +K+
Sbjct: 46 YTKLTMDLGSTEITATATT--SLPSISTFVEGYSSNYELKPSCVYQMQRPLIKV 97
>AL358937-4|CAI95320.1| 626|Homo sapiens nuclear receptor subfamily
4, group A, member 3 protein.
Length = 626
Score = 31.5 bits (68), Expect = 3.6
Identities = 16/54 (29%), Positives = 28/54 (51%)
Frame = +1
Query: 253 FQRLYFDLTGTETKSNSVTVQSLPNVSSIIKGYRDAYLVNLEAVVFPSAPSLKI 414
+ +L DL TE + + T SLP++S+ ++GY Y + V P +K+
Sbjct: 35 YTKLTMDLGSTEITATATT--SLPSISTFVEGYSSNYELKPSCVYQMQRPLIKV 86
>AL358937-3|CAM22558.1| 637|Homo sapiens nuclear receptor subfamily
4, group A, member 3 protein.
Length = 637
Score = 31.5 bits (68), Expect = 3.6
Identities = 16/54 (29%), Positives = 28/54 (51%)
Frame = +1
Query: 253 FQRLYFDLTGTETKSNSVTVQSLPNVSSIIKGYRDAYLVNLEAVVFPSAPSLKI 414
+ +L DL TE + + T SLP++S+ ++GY Y + V P +K+
Sbjct: 46 YTKLTMDLGSTEITATATT--SLPSISTFVEGYSSNYELKPSCVYQMQRPLIKV 97
>AY024361-1|AAK00583.1| 4911|Homo sapiens MLL3 protein.
Length = 4911
Score = 31.1 bits (67), Expect = 4.8
Identities = 14/45 (31%), Positives = 22/45 (48%)
Frame = +3
Query: 519 PYASSHPPLRSRATSTRSSNPPIPYTNHPXT*HPFPSIPLTPYXK 653
P A S P++ + ++S PP P P + + P P+ PY K
Sbjct: 1856 PPAPSRIPIQDSLSQAQTSQPPSPQVFSPGSSNSRPPSPMDPYAK 1900
>AF264750-1|AAF74766.2| 4025|Homo sapiens ALR-like protein protein.
Length = 4025
Score = 31.1 bits (67), Expect = 4.8
Identities = 14/45 (31%), Positives = 22/45 (48%)
Frame = +3
Query: 519 PYASSHPPLRSRATSTRSSNPPIPYTNHPXT*HPFPSIPLTPYXK 653
P A S P++ + ++S PP P P + + P P+ PY K
Sbjct: 917 PPAPSRIPIQDSLSQAQTSQPPSPQVFSPGSSNSRPPSPMDPYAK 961
>AC006474-1|AAS00364.1| 2185|Homo sapiens unknown protein.
Length = 2185
Score = 31.1 bits (67), Expect = 4.8
Identities = 14/45 (31%), Positives = 22/45 (48%)
Frame = +3
Query: 519 PYASSHPPLRSRATSTRSSNPPIPYTNHPXT*HPFPSIPLTPYXK 653
P A S P++ + ++S PP P P + + P P+ PY K
Sbjct: 917 PPAPSRIPIQDSLSQAQTSQPPSPQVFSPGSSNSRPPSPMDPYAK 961
>AB040939-1|BAA96030.2| 3310|Homo sapiens KIAA1506 protein protein.
Length = 3310
Score = 31.1 bits (67), Expect = 4.8
Identities = 14/45 (31%), Positives = 22/45 (48%)
Frame = +3
Query: 519 PYASSHPPLRSRATSTRSSNPPIPYTNHPXT*HPFPSIPLTPYXK 653
P A S P++ + ++S PP P P + + P P+ PY K
Sbjct: 1301 PPAPSRIPIQDSLSQAQTSQPPSPQVFSPGSSNSRPPSPMDPYAK 1345
>Z36714-1|CAA85308.1| 786|Homo sapiens cyclin F protein.
Length = 786
Score = 30.3 bits (65), Expect = 8.3
Identities = 25/83 (30%), Positives = 36/83 (43%)
Frame = +1
Query: 343 KGYRDAYLVNLEAVVFPSAPSLKIPVTVDLCWTTADVTVEGVNLLATPSSSRITIGGLAL 522
KG +D + L+ + P+ P K P+ DVT G + ++T S + GGL
Sbjct: 663 KGPQDPQALALDTQI-PATPGPK-PLVRTSREPGKDVTTSGYSSVSTASPTSSVDGGLGA 720
Query: 523 MHQATLPCDLGLHQPDHQIPRFH 591
+ Q T L LH H P H
Sbjct: 721 LPQPT--SVLSLHSDSHTQPCHH 741
>AK128329-1|BAC87386.1| 172|Homo sapiens protein ( Homo sapiens
cDNA FLJ46471 fis, clone THYMU3023394. ).
Length = 172
Score = 30.3 bits (65), Expect = 8.3
Identities = 18/38 (47%), Positives = 23/38 (60%)
Frame = +2
Query: 524 CIKPPSPAISGYINPIIKSPDSIHQPPPXLTSISINPP 637
C+KPPS + GY +P SP QPP L IS++PP
Sbjct: 101 CLKPPS-LVLGYSSPRTLSP----QPP--LQQISVSPP 131
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 104,475,590
Number of Sequences: 237096
Number of extensions: 2222532
Number of successful extensions: 9266
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 8837
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9232
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 9701808132
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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