Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP11_FL5_G14
(821 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ026032-1|AAY87891.1| 566|Apis mellifera nicotinic acetylcholi... 50 2e-08
DQ026033-1|AAY87892.1| 569|Apis mellifera nicotinic acetylcholi... 50 3e-08
DQ026034-1|AAY87893.1| 569|Apis mellifera nicotinic acetylcholi... 49 6e-08
DQ026036-1|AAY87895.1| 529|Apis mellifera nicotinic acetylcholi... 48 8e-08
DQ026035-1|AAY87894.1| 529|Apis mellifera nicotinic acetylcholi... 48 8e-08
EF127800-1|ABL67937.1| 461|Apis mellifera nicotinic acetylcholi... 48 1e-07
AY569781-1|AAS75781.1| 461|Apis mellifera neuronal nicotinic ac... 48 1e-07
AF514804-1|AAM51823.1| 537|Apis mellifera neuronal nicotinic ac... 48 1e-07
EF127801-1|ABL67938.1| 461|Apis mellifera nicotinic acetylcholi... 47 2e-07
EF127805-1|ABL67942.1| 461|Apis mellifera nicotinic acetylcholi... 47 2e-07
AY540846-1|AAS48080.1| 541|Apis mellifera neuronal nicotinic ac... 47 2e-07
EF127803-1|ABL67940.1| 461|Apis mellifera nicotinic acetylcholi... 46 4e-07
EF127804-1|ABL67941.1| 461|Apis mellifera nicotinic acetylcholi... 46 6e-07
EF127802-1|ABL67939.1| 461|Apis mellifera nicotinic acetylcholi... 46 6e-07
DQ026038-1|AAY87897.1| 520|Apis mellifera nicotinic acetylcholi... 46 6e-07
DQ026031-1|AAY87890.1| 601|Apis mellifera nicotinic acetylcholi... 46 6e-07
AY500239-1|AAR92109.1| 555|Apis mellifera neuronal nicotinic ac... 46 6e-07
DQ667183-1|ABG75735.1| 463|Apis mellifera GABA-gated ion channe... 45 7e-07
DQ667193-1|ABG75745.1| 510|Apis mellifera cys-loop ligand-gated... 45 1e-06
DQ667184-1|ABG75736.1| 489|Apis mellifera GABA-gated ion channe... 43 4e-06
DQ667182-1|ABG75734.1| 445|Apis mellifera GABA-gated chloride c... 40 4e-05
DQ667181-1|ABG75733.1| 445|Apis mellifera GABA-gated chloride c... 40 4e-05
AF094822-1|AAC63381.1| 365|Apis mellifera GABA receptor Rdl sub... 40 4e-05
DQ667186-1|ABG75738.1| 447|Apis mellifera glutamate-gated chlor... 37 3e-04
DQ667185-1|ABG75737.1| 447|Apis mellifera glutamate-gated chlor... 37 3e-04
DQ667188-1|ABG75740.1| 383|Apis mellifera histamine-gated chlor... 31 0.010
DQ667194-1|ABG75746.1| 391|Apis mellifera cys-loop ligand-gated... 26 0.37
DQ667187-1|ABG75739.1| 428|Apis mellifera histamine-gated chlor... 25 1.1
AB270697-1|BAF75928.1| 735|Apis mellifera FoxP protein protein. 22 7.9
AB161182-1|BAD08344.1| 1040|Apis mellifera metabotropic glutamat... 22 7.9
>DQ026032-1|AAY87891.1| 566|Apis mellifera nicotinic acetylcholine
receptor alpha3subunit protein.
Length = 566
Score = 50.4 bits (115), Expect = 2e-08
Identities = 27/89 (30%), Positives = 44/89 (49%), Gaps = 2/89 (2%)
Frame = +3
Query: 240 LQMNWIDKRLSWNAGEWGCSTWL-VSSERLWRPDVVLL-NAAATTAGDYALRARVSNNGS 413
++ +W D +L W+ E+G L V S+ +WRPD+VL NA A +A ++ G
Sbjct: 77 VEQSWYDYKLKWDPKEYGGVEMLHVPSDHIWRPDIVLYNNADGNFEVTLATKATLNYTGR 136
Query: 414 VSWIKRLDIXTPISMXLDNXPNDXQTCTV 500
V W + + ++ P D QTC +
Sbjct: 137 VEWKPPAIYKSSCEIDVEYFPFDEQTCVM 165
>DQ026033-1|AAY87892.1| 569|Apis mellifera nicotinic acetylcholine
receptor alpha4subunit protein.
Length = 569
Score = 50.0 bits (114), Expect = 3e-08
Identities = 27/89 (30%), Positives = 43/89 (48%), Gaps = 2/89 (2%)
Frame = +3
Query: 240 LQMNWIDKRLSWNAGEWGCSTWL-VSSERLWRPDVVLL-NAAATTAGDYALRARVSNNGS 413
++ +W D +L W E+G L V S+ +WRPD+VL NA A +A + + G
Sbjct: 81 VEQSWYDYKLRWEPKEYGGVKMLHVPSDHIWRPDIVLYNNADGNFEVTLATKATIYHQGL 140
Query: 414 VSWIKRLDIXTPISMXLDNXPNDXQTCTV 500
V W + + ++ P D QTC +
Sbjct: 141 VEWKPPAIYKSSCEIDVEYFPFDEQTCVL 169
>DQ026034-1|AAY87893.1| 569|Apis mellifera nicotinic acetylcholine
receptor alpha4subunit protein.
Length = 569
Score = 48.8 bits (111), Expect = 6e-08
Identities = 30/92 (32%), Positives = 47/92 (51%), Gaps = 5/92 (5%)
Frame = +3
Query: 240 LQMNWIDKRLSWNAGEWGCSTWL-VSSERLWRPDVVLLNAAATTAGDYAL----RARVSN 404
++ +W D +L W E+G L V S+ +WRPD+VL N A G+Y + +A V
Sbjct: 81 VEQSWYDYKLRWEPKEYGGVKMLHVPSDHIWRPDIVLYNNA---DGNYEVTLMTKATVYY 137
Query: 405 NGSVSWIKRLDIXTPISMXLDNXPNDXQTCTV 500
+G V W + S+ ++ P D QTC +
Sbjct: 138 SGLVVWQPPAVYKSSCSIDVEFFPYDVQTCVL 169
>DQ026036-1|AAY87895.1| 529|Apis mellifera nicotinic acetylcholine
receptor alpha6subunit protein.
Length = 529
Score = 48.4 bits (110), Expect = 8e-08
Identities = 24/87 (27%), Positives = 43/87 (49%), Gaps = 2/87 (2%)
Frame = +3
Query: 240 LQMNWIDKRLSWNAGEW-GCSTWLVSSERLWRPDVVLLNAA-ATTAGDYALRARVSNNGS 413
L++ W+D L WN E+ G ++ +LW+PD+++ N+A G Y V++NGS
Sbjct: 107 LKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSADEGFDGTYQTNVVVTHNGS 166
Query: 414 VSWIKRLDIXTPISMXLDNXPNDXQTC 494
++ + + + P D Q C
Sbjct: 167 CLYVPPGIFKSTCKIDITWFPFDDQHC 193
>DQ026035-1|AAY87894.1| 529|Apis mellifera nicotinic acetylcholine
receptor alpha6subunit protein.
Length = 529
Score = 48.4 bits (110), Expect = 8e-08
Identities = 24/87 (27%), Positives = 43/87 (49%), Gaps = 2/87 (2%)
Frame = +3
Query: 240 LQMNWIDKRLSWNAGEW-GCSTWLVSSERLWRPDVVLLNAA-ATTAGDYALRARVSNNGS 413
L++ W+D L WN E+ G ++ +LW+PD+++ N+A G Y V++NGS
Sbjct: 107 LKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSADEGFDGTYQTNVVVTHNGS 166
Query: 414 VSWIKRLDIXTPISMXLDNXPNDXQTC 494
++ + + + P D Q C
Sbjct: 167 CLYVPPGIFKSTCKIDITWFPFDDQHC 193
>EF127800-1|ABL67937.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 1 protein.
Length = 461
Score = 48.0 bits (109), Expect = 1e-07
Identities = 24/87 (27%), Positives = 43/87 (49%), Gaps = 2/87 (2%)
Frame = +3
Query: 240 LQMNWIDKRLSWNAGEW-GCSTWLVSSERLWRPDVVLLNAA-ATTAGDYALRARVSNNGS 413
L++ W+D L WN E+ G ++ +LW+PD+++ N+A G Y V++NGS
Sbjct: 39 LKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSADEGFDGTYQTSVVVTHNGS 98
Query: 414 VSWIKRLDIXTPISMXLDNXPNDXQTC 494
++ + + + P D Q C
Sbjct: 99 CLYVPPGIFKSTCKIDITWFPFDDQHC 125
>AY569781-1|AAS75781.1| 461|Apis mellifera neuronal nicotinic
acetylcholine Apisa7-2 subunit protein.
Length = 461
Score = 47.6 bits (108), Expect = 1e-07
Identities = 26/86 (30%), Positives = 37/86 (43%), Gaps = 3/86 (3%)
Frame = +3
Query: 252 WIDKRLSWNAGEW-GCSTWLVSSERLWRPDVVLLNAAATTAGDYALRAR--VSNNGSVSW 422
W D L WNA E+ G V R+WRPD +L N A + VS+ G V W
Sbjct: 62 WTDHHLKWNASEFAGIRVIRVPYNRVWRPDTILYNNADPQYSSAVINTNVIVSHTGEVVW 121
Query: 423 IKRLDIXTPISMXLDNXPNDXQTCTV 500
+ + + ++ P D Q C +
Sbjct: 122 LSHGIFRSSCDIDVEFFPFDEQRCVL 147
>AF514804-1|AAM51823.1| 537|Apis mellifera neuronal nicotinic
acetylcholine receptoralpha-3 protein.
Length = 537
Score = 47.6 bits (108), Expect = 1e-07
Identities = 29/90 (32%), Positives = 44/90 (48%), Gaps = 5/90 (5%)
Frame = +3
Query: 240 LQMNWIDKRLSWNAGEWGCSTWL-VSSERLWRPDVVLLNAAATTAGDYAL----RARVSN 404
++ W D +L WN E+G L V SE +W PD+VL N A G+Y + +A +
Sbjct: 86 VEQRWNDYKLKWNPEEYGGVEMLYVPSENIWLPDIVLYNNA---DGNYEVTLMTKATLKY 142
Query: 405 NGSVSWIKRLDIXTPISMXLDNXPNDXQTC 494
G VSW + + ++ P D Q+C
Sbjct: 143 TGDVSWKPPAIYKSSCEINVEYFPFDEQSC 172
>EF127801-1|ABL67938.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 2 protein.
Length = 461
Score = 47.2 bits (107), Expect = 2e-07
Identities = 24/87 (27%), Positives = 43/87 (49%), Gaps = 2/87 (2%)
Frame = +3
Query: 240 LQMNWIDKRLSWNAGEW-GCSTWLVSSERLWRPDVVLLNAA-ATTAGDYALRARVSNNGS 413
L++ W+D L WN E+ G ++ +LW+PD+++ N+A G Y V+++GS
Sbjct: 39 LKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSADEGFDGTYQTSVVVTHDGS 98
Query: 414 VSWIKRLDIXTPISMXLDNXPNDXQTC 494
++ + M + P D Q C
Sbjct: 99 CLYVPPGIFKSTCKMDIAWFPFDDQHC 125
>EF127805-1|ABL67942.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 6 protein.
Length = 461
Score = 46.8 bits (106), Expect = 2e-07
Identities = 24/87 (27%), Positives = 43/87 (49%), Gaps = 2/87 (2%)
Frame = +3
Query: 240 LQMNWIDKRLSWNAGEW-GCSTWLVSSERLWRPDVVLLNAA-ATTAGDYALRARVSNNGS 413
L++ W+D L WN E+ G ++ +LW+PD+++ N+A G Y V+++GS
Sbjct: 39 LKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSADEGFDGTYQTSVVVTHDGS 98
Query: 414 VSWIKRLDIXTPISMXLDNXPNDXQTC 494
++ + M + P D Q C
Sbjct: 99 CLYVPPGIFKSTCKMDVAWFPFDDQHC 125
>AY540846-1|AAS48080.1| 541|Apis mellifera neuronal nicotinic
acetylcholine receptorApisa2 subunit protein.
Length = 541
Score = 46.8 bits (106), Expect = 2e-07
Identities = 28/87 (32%), Positives = 40/87 (45%), Gaps = 2/87 (2%)
Frame = +3
Query: 240 LQMNWIDKRLSWNAGEWGCSTWL-VSSERLWRPDVVLLNAAATTAGDYAL-RARVSNNGS 413
L+ W D + W+ E+G T L V SE +W PD+VL N A G + +A + G
Sbjct: 73 LEHEWQDHKFQWDPAEYGGVTELYVPSEHIWLPDIVLYNNADGEYGVTTMTKAILHYTGK 132
Query: 414 VSWIKRLDIXTPISMXLDNXPNDXQTC 494
V W + + + P D QTC
Sbjct: 133 VLWTPPAIFKSSCEIDVRYFPFDQQTC 159
>EF127803-1|ABL67940.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 4 protein.
Length = 461
Score = 46.0 bits (104), Expect = 4e-07
Identities = 23/87 (26%), Positives = 43/87 (49%), Gaps = 2/87 (2%)
Frame = +3
Query: 240 LQMNWIDKRLSWNAGEW-GCSTWLVSSERLWRPDVVLLNAA-ATTAGDYALRARVSNNGS 413
L++ W+D L WN E+ G ++ +LW+PD+++ N+A G Y V+++GS
Sbjct: 39 LKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSADEGFDGTYQTSVVVTHDGS 98
Query: 414 VSWIKRLDIXTPISMXLDNXPNDXQTC 494
++ + + + P D Q C
Sbjct: 99 CLYVPPGIFKSTCKIDITWFPFDDQHC 125
>EF127804-1|ABL67941.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 5 protein.
Length = 461
Score = 45.6 bits (103), Expect = 6e-07
Identities = 23/87 (26%), Positives = 43/87 (49%), Gaps = 2/87 (2%)
Frame = +3
Query: 240 LQMNWIDKRLSWNAGEW-GCSTWLVSSERLWRPDVVLLNAA-ATTAGDYALRARVSNNGS 413
L++ W+D L WN E+ G ++ +LW+PD+++ N+A G Y V+++GS
Sbjct: 39 LKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSADEGFDGTYQTSVVVTHDGS 98
Query: 414 VSWIKRLDIXTPISMXLDNXPNDXQTC 494
++ + + + P D Q C
Sbjct: 99 CLYVPPGIFKSTCKIDIAWFPFDDQHC 125
>EF127802-1|ABL67939.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 3 protein.
Length = 461
Score = 45.6 bits (103), Expect = 6e-07
Identities = 23/87 (26%), Positives = 43/87 (49%), Gaps = 2/87 (2%)
Frame = +3
Query: 240 LQMNWIDKRLSWNAGEW-GCSTWLVSSERLWRPDVVLLNAA-ATTAGDYALRARVSNNGS 413
L++ W+D L WN E+ G ++ +LW+PD+++ N+A G Y V+++GS
Sbjct: 39 LKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSADEGFDGTYQTSVVVTHDGS 98
Query: 414 VSWIKRLDIXTPISMXLDNXPNDXQTC 494
++ + + + P D Q C
Sbjct: 99 CLYVPPGIFGSTCKIDIAWFPFDDQHC 125
>DQ026038-1|AAY87897.1| 520|Apis mellifera nicotinic acetylcholine
receptor beta1subunit protein.
Length = 520
Score = 45.6 bits (103), Expect = 6e-07
Identities = 25/90 (27%), Positives = 45/90 (50%), Gaps = 5/90 (5%)
Frame = +3
Query: 240 LQMNWIDKRLSWNAGEWG-CSTWLVSSERLWRPDVVLLNAAATTAGDYALRAR----VSN 404
L+ W D +L W+ ++G + +++W+PD+VL N A G+Y +R + +
Sbjct: 79 LRFIWTDYQLQWDEADYGGIGVLRLPPDKVWKPDIVLFNNA---DGNYEVRYKSNVLIYP 135
Query: 405 NGSVSWIKRLDIXTPISMXLDNXPNDXQTC 494
NG V W+ + ++ + P D QTC
Sbjct: 136 NGDVLWVPPAIYQSSCTIDVTYFPFDQQTC 165
>DQ026031-1|AAY87890.1| 601|Apis mellifera nicotinic acetylcholine
receptor alpha1subunit protein.
Length = 601
Score = 45.6 bits (103), Expect = 6e-07
Identities = 28/90 (31%), Positives = 44/90 (48%), Gaps = 5/90 (5%)
Frame = +3
Query: 240 LQMNWIDKRLSWNAGEWG-CSTWLVSSERLWRPDVVLLNAAATTAGDYAL----RARVSN 404
++ W D +L WN ++G T V SE +W PD+VL N A G+Y + +A + +
Sbjct: 73 VEQEWNDYKLKWNPDDYGGVDTLHVPSEHIWLPDIVLYNNA---DGNYEVTIMTKAILHH 129
Query: 405 NGSVSWIKRLDIXTPISMXLDNXPNDXQTC 494
G V W + + ++ P D QTC
Sbjct: 130 TGKVVWKPPAIYKSFCEIDVEYFPFDEQTC 159
>AY500239-1|AAR92109.1| 555|Apis mellifera neuronal nicotinic
acetylcholine receptoralpha7-1 protein.
Length = 555
Score = 45.6 bits (103), Expect = 6e-07
Identities = 25/87 (28%), Positives = 41/87 (47%), Gaps = 2/87 (2%)
Frame = +3
Query: 240 LQMNWIDKRLSWNAGEWGCSTWL-VSSERLWRPDVVLLNAA-ATTAGDYALRARVSNNGS 413
L++ W D + WN ++G L + RLW+PDV++ N+A G Y V NNG+
Sbjct: 76 LKLEWNDVNMRWNVSDYGGVRDLRIPPHRLWKPDVLMYNSADEGFDGTYPTNVVVKNNGT 135
Query: 414 VSWIKRLDIXTPISMXLDNXPNDXQTC 494
++ + + + P D Q C
Sbjct: 136 CLYVPPGIFKSTCKIDITWFPFDDQRC 162
>DQ667183-1|ABG75735.1| 463|Apis mellifera GABA-gated ion channel
protein.
Length = 463
Score = 45.2 bits (102), Expect = 7e-07
Identities = 26/97 (26%), Positives = 43/97 (44%), Gaps = 3/97 (3%)
Frame = +3
Query: 243 QMNWIDKRLSWNAGEWGCSTWLVSSERLWRPDVVLLNAAAT---TAGDYALRARVSNNGS 413
+ +W+D+RL++ G+ + + R+W+PD N + T R+ +G
Sbjct: 58 RQSWVDRRLAFQGGKETLALSISMLARIWKPDTYFYNGKHSYLHTITSPNKFVRLYQDGR 117
Query: 414 VSWIKRLDIXTPISMXLDNXPNDXQTCTVXVRXLGCT 524
V + RL I M L+N P D Q C + G T
Sbjct: 118 VLYSSRLTIKAGCPMNLENFPMDTQRCPLQFGSFGYT 154
>DQ667193-1|ABG75745.1| 510|Apis mellifera cys-loop ligand-gated
ion channel subunit protein.
Length = 510
Score = 44.8 bits (101), Expect = 1e-06
Identities = 27/96 (28%), Positives = 41/96 (42%), Gaps = 3/96 (3%)
Frame = +3
Query: 243 QMNWIDKRLSWNAGEWGCSTWLVSSERLWRPDVVLLNAAATTAGDYALR---ARVSNNGS 413
+ +W D RLS+ S + ER+WRPD N + + R+S +G
Sbjct: 90 RQSWRDSRLSFLGPIKSLSLSIKMLERIWRPDTYFYNGKHSYVHTITVPNKLLRISQDGD 149
Query: 414 VSWIKRLDIXTPISMXLDNXPNDXQTCTVXVRXLGC 521
+ + RL I M L N P D Q+C + + C
Sbjct: 150 ILYSMRLTIKAKCPMELRNFPMDRQSCPLILGSCKC 185
>DQ667184-1|ABG75736.1| 489|Apis mellifera GABA-gated ion channel
protein.
Length = 489
Score = 42.7 bits (96), Expect = 4e-06
Identities = 29/98 (29%), Positives = 43/98 (43%), Gaps = 3/98 (3%)
Frame = +3
Query: 240 LQMNWIDKRLSWNAGEWGCSTWLVSSERLWRPDVVLLNAAATTAGDYALR---ARVSNNG 410
L W D+RL+++ E + +E++W PD N + D R R+S +G
Sbjct: 88 LNQYWKDERLAFSQEEEVLTLSGDFAEKIWVPDTFFANDKNSFLHDVTERNKLVRLSGDG 147
Query: 411 SVSWIKRLDIXTPISMXLDNXPNDXQTCTVXVRXLGCT 524
SV++ R M L P D Q CTV + G T
Sbjct: 148 SVTYGMRFTTTLACMMDLHYYPLDSQNCTVEIESYGYT 185
>DQ667182-1|ABG75734.1| 445|Apis mellifera GABA-gated chloride
channel protein.
Length = 445
Score = 39.5 bits (88), Expect = 4e-05
Identities = 30/100 (30%), Positives = 44/100 (44%), Gaps = 9/100 (9%)
Frame = +3
Query: 252 WIDKRLSWNAGEWGCSTWLVSSE---RLWRPDVVLLNAA------ATTAGDYALRARVSN 404
W D RL++ G T V SE +W PD +N ATT+ ++ R+ +
Sbjct: 67 WTDPRLAFKK-RTGVETLSVGSEFIKNIWVPDTFFVNEKQSYFHIATTSNEFI---RIHH 122
Query: 405 NGSVSWIKRLDIXTPISMXLDNXPNDXQTCTVXVRXLGCT 524
+GS++ RL I M L P D Q C + + G T
Sbjct: 123 SGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYT 162
>DQ667181-1|ABG75733.1| 445|Apis mellifera GABA-gated chloride
channel protein.
Length = 445
Score = 39.5 bits (88), Expect = 4e-05
Identities = 30/100 (30%), Positives = 44/100 (44%), Gaps = 9/100 (9%)
Frame = +3
Query: 252 WIDKRLSWNAGEWGCSTWLVSSE---RLWRPDVVLLNAA------ATTAGDYALRARVSN 404
W D RL++ G T V SE +W PD +N ATT+ ++ R+ +
Sbjct: 67 WTDPRLAFKK-RTGVETLSVGSEFIKNIWVPDTFFVNEKQSYFHIATTSNEFI---RIHH 122
Query: 405 NGSVSWIKRLDIXTPISMXLDNXPNDXQTCTVXVRXLGCT 524
+GS++ RL I M L P D Q C + + G T
Sbjct: 123 SGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYT 162
>AF094822-1|AAC63381.1| 365|Apis mellifera GABA receptor Rdl
subunit protein.
Length = 365
Score = 39.5 bits (88), Expect = 4e-05
Identities = 30/100 (30%), Positives = 44/100 (44%), Gaps = 9/100 (9%)
Frame = +3
Query: 252 WIDKRLSWNAGEWGCSTWLVSSE---RLWRPDVVLLNAA------ATTAGDYALRARVSN 404
W D RL++ G T V SE +W PD +N ATT+ ++ R+ +
Sbjct: 6 WTDPRLAFKK-RTGVETLSVGSEFIKNIWVPDTFFVNEKQSYFHIATTSNEFI---RIHH 61
Query: 405 NGSVSWIKRLDIXTPISMXLDNXPNDXQTCTVXVRXLGCT 524
+GS++ RL I M L P D Q C + + G T
Sbjct: 62 SGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYT 101
>DQ667186-1|ABG75738.1| 447|Apis mellifera glutamate-gated chloride
channel protein.
Length = 447
Score = 36.7 bits (81), Expect = 3e-04
Identities = 27/96 (28%), Positives = 42/96 (43%), Gaps = 5/96 (5%)
Frame = +3
Query: 252 WIDKRLSWN--AGEWGCSTWLVSSERLWRPDVVLLNAAATTAGDYALR---ARVSNNGSV 416
W+D+RL +N G T L + R+W PD+ N + + R+ NGSV
Sbjct: 90 WLDERLRFNDFGGRLKYLT-LTDASRVWMPDLFFSNEKEGHFHNIIMPNVYIRIFPNGSV 148
Query: 417 SWIKRLDIXTPISMXLDNXPNDXQTCTVXVRXLGCT 524
+ R+ + M L P D Q C++ + G T
Sbjct: 149 LYSIRISLTLSCPMNLKLYPLDRQVCSLRMASYGWT 184
>DQ667185-1|ABG75737.1| 447|Apis mellifera glutamate-gated chloride
channel protein.
Length = 447
Score = 36.7 bits (81), Expect = 3e-04
Identities = 27/96 (28%), Positives = 42/96 (43%), Gaps = 5/96 (5%)
Frame = +3
Query: 252 WIDKRLSWN--AGEWGCSTWLVSSERLWRPDVVLLNAAATTAGDYALR---ARVSNNGSV 416
W+D+RL +N G T L + R+W PD+ N + + R+ NGSV
Sbjct: 90 WLDERLRFNDFGGRLKYLT-LTDASRVWMPDLFFSNEKEGHFHNIIMPNVYIRIFPNGSV 148
Query: 417 SWIKRLDIXTPISMXLDNXPNDXQTCTVXVRXLGCT 524
+ R+ + M L P D Q C++ + G T
Sbjct: 149 LYSIRISLTLSCPMNLKLYPLDRQVCSLRMASYGWT 184
>DQ667188-1|ABG75740.1| 383|Apis mellifera histamine-gated chloride
channel protein.
Length = 383
Score = 31.5 bits (68), Expect = 0.010
Identities = 15/70 (21%), Positives = 35/70 (50%), Gaps = 3/70 (4%)
Frame = +3
Query: 324 LWRPDVVLLNAAATTAGDYALRAR---VSNNGSVSWIKRLDIXTPISMXLDNXPNDXQTC 494
+WRPD NA T + ++ + ++ ++ ++ +L + +M ++ P+D Q C
Sbjct: 87 IWRPDCFFKNAKKVTFHEMSIPNHYLWLYHDKTLLYMSKLTLVLSCAMKFESYPHDTQIC 146
Query: 495 TVXVRXLGCT 524
++ + L T
Sbjct: 147 SMMIESLSHT 156
>DQ667194-1|ABG75746.1| 391|Apis mellifera cys-loop ligand-gated
ion channel subunit protein.
Length = 391
Score = 26.2 bits (55), Expect = 0.37
Identities = 18/68 (26%), Positives = 28/68 (41%), Gaps = 5/68 (7%)
Frame = +3
Query: 318 ERLWRPDVVLLNAAATTAGDYALRARVSN-----NGSVSWIKRLDIXTPISMXLDNXPND 482
+ LW+PD LNA + AL + S+ N +V + R+ M P D
Sbjct: 69 DSLWQPDPYFLNAKVSEIA--ALNHKFSSVTLYRNKTVKYSARMHAIIACQMEFQLYPMD 126
Query: 483 XQTCTVXV 506
Q C + +
Sbjct: 127 IQICPIYI 134
>DQ667187-1|ABG75739.1| 428|Apis mellifera histamine-gated chloride
channel protein.
Length = 428
Score = 24.6 bits (51), Expect = 1.1
Identities = 15/72 (20%), Positives = 31/72 (43%), Gaps = 3/72 (4%)
Frame = +3
Query: 318 ERLWRPDVVLLNAAATTAGDYALRAR---VSNNGSVSWIKRLDIXTPISMXLDNXPNDXQ 488
+ +WRPD NA + T + + + ++ ++ +L + +M P+D Q
Sbjct: 116 KNMWRPDSFFKNAKSVTFQTMTIPNHYLWLYKDKTILYMVKLTLKLSCAMNFLIYPHDTQ 175
Query: 489 TCTVXVRXLGCT 524
C + + L T
Sbjct: 176 ECKLQMESLSHT 187
>AB270697-1|BAF75928.1| 735|Apis mellifera FoxP protein protein.
Length = 735
Score = 21.8 bits (44), Expect = 7.9
Identities = 8/14 (57%), Positives = 9/14 (64%)
Frame = -1
Query: 305 PSAAAPFPCVPTQS 264
PSA AP P +P S
Sbjct: 411 PSAGAPMPPIPNMS 424
>AB161182-1|BAD08344.1| 1040|Apis mellifera metabotropic glutamate
receptor protein.
Length = 1040
Score = 21.8 bits (44), Expect = 7.9
Identities = 10/26 (38%), Positives = 13/26 (50%)
Frame = -2
Query: 103 GQ*CCVFAFCRTSYSTSEEKLVTRII 26
G+ CC F T Y + K VT+ I
Sbjct: 602 GEQCCWHCFNCTQYQIRDHKDVTQCI 627
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 193,691
Number of Sequences: 438
Number of extensions: 4443
Number of successful extensions: 70
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 44
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 46
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 26217432
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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