Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP11_FL5_G13
(815 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ026039-1|AAY87898.1| 427|Apis mellifera nicotinic acetylcholi... 44 1e-06
AY540846-1|AAS48080.1| 541|Apis mellifera neuronal nicotinic ac... 44 2e-06
DQ667183-1|ABG75735.1| 463|Apis mellifera GABA-gated ion channe... 43 4e-06
DQ026031-1|AAY87890.1| 601|Apis mellifera nicotinic acetylcholi... 39 6e-05
DQ026036-1|AAY87895.1| 529|Apis mellifera nicotinic acetylcholi... 38 1e-04
DQ026035-1|AAY87894.1| 529|Apis mellifera nicotinic acetylcholi... 38 1e-04
EF127805-1|ABL67942.1| 461|Apis mellifera nicotinic acetylcholi... 37 2e-04
EF127804-1|ABL67941.1| 461|Apis mellifera nicotinic acetylcholi... 37 2e-04
EF127803-1|ABL67940.1| 461|Apis mellifera nicotinic acetylcholi... 37 2e-04
EF127802-1|ABL67939.1| 461|Apis mellifera nicotinic acetylcholi... 37 2e-04
EF127801-1|ABL67938.1| 461|Apis mellifera nicotinic acetylcholi... 37 2e-04
EF127800-1|ABL67937.1| 461|Apis mellifera nicotinic acetylcholi... 37 2e-04
AY569781-1|AAS75781.1| 461|Apis mellifera neuronal nicotinic ac... 37 3e-04
DQ026032-1|AAY87891.1| 566|Apis mellifera nicotinic acetylcholi... 36 3e-04
DQ667193-1|ABG75745.1| 510|Apis mellifera cys-loop ligand-gated... 35 8e-04
AF514804-1|AAM51823.1| 537|Apis mellifera neuronal nicotinic ac... 35 8e-04
DQ667185-1|ABG75737.1| 447|Apis mellifera glutamate-gated chlor... 34 0.001
DQ026038-1|AAY87897.1| 520|Apis mellifera nicotinic acetylcholi... 34 0.001
DQ026037-1|AAY87896.1| 431|Apis mellifera nicotinic acetylcholi... 33 0.002
DQ026034-1|AAY87893.1| 569|Apis mellifera nicotinic acetylcholi... 33 0.002
DQ026033-1|AAY87892.1| 569|Apis mellifera nicotinic acetylcholi... 33 0.002
AY500239-1|AAR92109.1| 555|Apis mellifera neuronal nicotinic ac... 33 0.002
AB270697-1|BAF75928.1| 735|Apis mellifera FoxP protein protein. 23 4.5
DQ667192-1|ABG75744.1| 489|Apis mellifera pH-sensitive chloride... 22 7.8
DQ667191-1|ABG75743.1| 475|Apis mellifera pH-sensitive chloride... 22 7.8
DQ667190-1|ABG75742.1| 509|Apis mellifera pH-sensitive chloride... 22 7.8
DQ667189-1|ABG75741.1| 458|Apis mellifera pH-sensitive chloride... 22 7.8
>DQ026039-1|AAY87898.1| 427|Apis mellifera nicotinic acetylcholine
receptor beta2subunit protein.
Length = 427
Score = 44.4 bits (100), Expect = 1e-06
Identities = 27/92 (29%), Positives = 44/92 (47%), Gaps = 6/92 (6%)
Frame = +1
Query: 79 CENATSLSLMIDS---LLATYDRDSPPDSKIV--VNLTLHLRHANIRESESTVRIQADLQ 243
C++ TS S + L YDRD P+ K ++ L ++H N+ E TV L+
Sbjct: 28 CKDITSTSALYRLKLYLFCDYDRDIIPEQKNATKIDFGLSIQHYNVDEYSHTVDFHVMLK 87
Query: 244 MNWIDKRLSWNAGEW-GCSTWLVSSERLWRPD 336
+ W L+W + E+ ++ V S +W PD
Sbjct: 88 LMWEQSHLTWKSSEFDSINSIRVKSYEIWVPD 119
>AY540846-1|AAS48080.1| 541|Apis mellifera neuronal nicotinic
acetylcholine receptorApisa2 subunit protein.
Length = 541
Score = 43.6 bits (98), Expect = 2e-06
Identities = 41/158 (25%), Positives = 59/158 (37%), Gaps = 9/158 (5%)
Frame = +1
Query: 61 IASAAECENATSLSLMIDSLLATYDRDSPPDSK----IVVNLTLHLRHA---NIRESEST 219
I SA C + D LL+ Y+R P S +VV L L L N+++ T
Sbjct: 9 ILSARICHGNPDAKRLYDDLLSNYNRLIRPVSNNNDTVVVKLGLRLSQLIDLNLKDQILT 68
Query: 220 VRIQADLQMNWIDKRLSWNAGEWGCSTWL-VSSERLWRPDXXXXXXXXXXXGDYALRXRV 396
+ L+ W D + W+ E+G T L V SE +W PD G + +
Sbjct: 69 TNVW--LEHEWQDHKFQWDPAEYGGVTELYVPSEHIWLPDIVLYNNADGEYGVTTMTKAI 126
Query: 397 SN-XGSVXWIKRLDISTXXSIXLXXRPTXXQTARFXXG 507
+ G V W + I + P QT G
Sbjct: 127 LHYTGKVLWTPPAIFKSSCEIDVRYFPFDQQTCFMKFG 164
>DQ667183-1|ABG75735.1| 463|Apis mellifera GABA-gated ion channel
protein.
Length = 463
Score = 42.7 bits (96), Expect = 4e-06
Identities = 23/88 (26%), Positives = 45/88 (51%), Gaps = 4/88 (4%)
Frame = +1
Query: 85 NATSLSLMIDSLLATYDRDSPPD---SKIVVNLTLHLRHAN-IRESESTVRIQADLQMNW 252
N +++S ++D+LL YD PD V + + +R I E + T + + +W
Sbjct: 2 NHSNISELLDNLLRGYDNSVRPDFGGPPATVEVDIMVRSMGPISEVDMTYSMDCYFRQSW 61
Query: 253 IDKRLSWNAGEWGCSTWLVSSERLWRPD 336
+D+RL++ G+ + + R+W+PD
Sbjct: 62 VDRRLAFQGGKETLALSISMLARIWKPD 89
>DQ026031-1|AAY87890.1| 601|Apis mellifera nicotinic acetylcholine
receptor alpha1subunit protein.
Length = 601
Score = 38.7 bits (86), Expect = 6e-05
Identities = 26/104 (25%), Positives = 45/104 (43%), Gaps = 8/104 (7%)
Frame = +1
Query: 49 LTCAIASAAECENATSLSLMIDSLLATYDRDSPP----DSKIVVNLTLHLRH---ANIRE 207
++C +A + + D LL+ Y+R P ++ V + L L N++
Sbjct: 5 ISCLVAPFPGASANSEAKRLYDDLLSNYNRLIRPVGNNSDRLTVKMGLRLSQLIDVNLKN 64
Query: 208 SESTVRIQADLQMNWIDKRLSWNAGEW-GCSTWLVSSERLWRPD 336
T + ++ W D +L WN ++ G T V SE +W PD
Sbjct: 65 QIMTTNVW--VEQEWNDYKLKWNPDDYGGVDTLHVPSEHIWLPD 106
>DQ026036-1|AAY87895.1| 529|Apis mellifera nicotinic acetylcholine
receptor alpha6subunit protein.
Length = 529
Score = 37.5 bits (83), Expect = 1e-04
Identities = 19/78 (24%), Positives = 34/78 (43%), Gaps = 2/78 (2%)
Frame = +1
Query: 196 NIRESESTVRIQADLQMNWIDKRLSWNAGEW-GCSTWLVSSERLWRPD-XXXXXXXXXXX 369
++ E + A L++ W+D L WN E+ G ++ +LW+PD
Sbjct: 93 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSADEGFD 152
Query: 370 GDYALRXRVSNXGSVXWI 423
G Y V++ GS ++
Sbjct: 153 GTYQTNVVVTHNGSCLYV 170
>DQ026035-1|AAY87894.1| 529|Apis mellifera nicotinic acetylcholine
receptor alpha6subunit protein.
Length = 529
Score = 37.5 bits (83), Expect = 1e-04
Identities = 19/78 (24%), Positives = 34/78 (43%), Gaps = 2/78 (2%)
Frame = +1
Query: 196 NIRESESTVRIQADLQMNWIDKRLSWNAGEW-GCSTWLVSSERLWRPD-XXXXXXXXXXX 369
++ E + A L++ W+D L WN E+ G ++ +LW+PD
Sbjct: 93 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSADEGFD 152
Query: 370 GDYALRXRVSNXGSVXWI 423
G Y V++ GS ++
Sbjct: 153 GTYQTNVVVTHNGSCLYV 170
>EF127805-1|ABL67942.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 6 protein.
Length = 461
Score = 37.1 bits (82), Expect = 2e-04
Identities = 19/78 (24%), Positives = 34/78 (43%), Gaps = 2/78 (2%)
Frame = +1
Query: 196 NIRESESTVRIQADLQMNWIDKRLSWNAGEW-GCSTWLVSSERLWRPD-XXXXXXXXXXX 369
++ E + A L++ W+D L WN E+ G ++ +LW+PD
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSADEGFD 84
Query: 370 GDYALRXRVSNXGSVXWI 423
G Y V++ GS ++
Sbjct: 85 GTYQTSVVVTHDGSCLYV 102
>EF127804-1|ABL67941.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 5 protein.
Length = 461
Score = 37.1 bits (82), Expect = 2e-04
Identities = 19/78 (24%), Positives = 34/78 (43%), Gaps = 2/78 (2%)
Frame = +1
Query: 196 NIRESESTVRIQADLQMNWIDKRLSWNAGEW-GCSTWLVSSERLWRPD-XXXXXXXXXXX 369
++ E + A L++ W+D L WN E+ G ++ +LW+PD
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSADEGFD 84
Query: 370 GDYALRXRVSNXGSVXWI 423
G Y V++ GS ++
Sbjct: 85 GTYQTSVVVTHDGSCLYV 102
>EF127803-1|ABL67940.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 4 protein.
Length = 461
Score = 37.1 bits (82), Expect = 2e-04
Identities = 19/78 (24%), Positives = 34/78 (43%), Gaps = 2/78 (2%)
Frame = +1
Query: 196 NIRESESTVRIQADLQMNWIDKRLSWNAGEW-GCSTWLVSSERLWRPD-XXXXXXXXXXX 369
++ E + A L++ W+D L WN E+ G ++ +LW+PD
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSADEGFD 84
Query: 370 GDYALRXRVSNXGSVXWI 423
G Y V++ GS ++
Sbjct: 85 GTYQTSVVVTHDGSCLYV 102
>EF127802-1|ABL67939.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 3 protein.
Length = 461
Score = 37.1 bits (82), Expect = 2e-04
Identities = 19/78 (24%), Positives = 34/78 (43%), Gaps = 2/78 (2%)
Frame = +1
Query: 196 NIRESESTVRIQADLQMNWIDKRLSWNAGEW-GCSTWLVSSERLWRPD-XXXXXXXXXXX 369
++ E + A L++ W+D L WN E+ G ++ +LW+PD
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSADEGFD 84
Query: 370 GDYALRXRVSNXGSVXWI 423
G Y V++ GS ++
Sbjct: 85 GTYQTSVVVTHDGSCLYV 102
>EF127801-1|ABL67938.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 2 protein.
Length = 461
Score = 37.1 bits (82), Expect = 2e-04
Identities = 19/78 (24%), Positives = 34/78 (43%), Gaps = 2/78 (2%)
Frame = +1
Query: 196 NIRESESTVRIQADLQMNWIDKRLSWNAGEW-GCSTWLVSSERLWRPD-XXXXXXXXXXX 369
++ E + A L++ W+D L WN E+ G ++ +LW+PD
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSADEGFD 84
Query: 370 GDYALRXRVSNXGSVXWI 423
G Y V++ GS ++
Sbjct: 85 GTYQTSVVVTHDGSCLYV 102
>EF127800-1|ABL67937.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 1 protein.
Length = 461
Score = 37.1 bits (82), Expect = 2e-04
Identities = 19/78 (24%), Positives = 34/78 (43%), Gaps = 2/78 (2%)
Frame = +1
Query: 196 NIRESESTVRIQADLQMNWIDKRLSWNAGEW-GCSTWLVSSERLWRPD-XXXXXXXXXXX 369
++ E + A L++ W+D L WN E+ G ++ +LW+PD
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSADEGFD 84
Query: 370 GDYALRXRVSNXGSVXWI 423
G Y V++ GS ++
Sbjct: 85 GTYQTSVVVTHNGSCLYV 102
>AY569781-1|AAS75781.1| 461|Apis mellifera neuronal nicotinic
acetylcholine Apisa7-2 subunit protein.
Length = 461
Score = 36.7 bits (81), Expect = 3e-04
Identities = 24/91 (26%), Positives = 35/91 (38%), Gaps = 3/91 (3%)
Frame = +1
Query: 160 IVVNLTLHLRHANIRESESTVRIQADLQMNWIDKRLSWNAGEW-GCSTWLVSSERLWRPD 336
+V L+LH ++ E + + W D L WNA E+ G V R+WRPD
Sbjct: 33 VVFGLSLH-HIIDVDEKNQILTTNCWVTQIWTDHHLKWNASEFAGIRVIRVPYNRVWRPD 91
Query: 337 XXXXXXXXXXXGDYALRXR--VSNXGSVXWI 423
+ VS+ G V W+
Sbjct: 92 TILYNNADPQYSSAVINTNVIVSHTGEVVWL 122
>DQ026032-1|AAY87891.1| 566|Apis mellifera nicotinic acetylcholine
receptor alpha3subunit protein.
Length = 566
Score = 36.3 bits (80), Expect = 3e-04
Identities = 23/94 (24%), Positives = 42/94 (44%), Gaps = 8/94 (8%)
Frame = +1
Query: 79 CENATSLSLMIDSLLATYDRDSPPDSKIVVNLTLHLR-------HANIRESESTVRIQAD 237
C + D LL+ Y++ P + LT+ ++ N++ T +
Sbjct: 19 CSGNPDAKRLYDDLLSNYNKLVRPVVNVTDALTVKIKLKLSQLIDVNLKNQIMTTNLW-- 76
Query: 238 LQMNWIDKRLSWNAGEWGCSTWL-VSSERLWRPD 336
++ +W D +L W+ E+G L V S+ +WRPD
Sbjct: 77 VEQSWYDYKLKWDPKEYGGVEMLHVPSDHIWRPD 110
>DQ667193-1|ABG75745.1| 510|Apis mellifera cys-loop ligand-gated
ion channel subunit protein.
Length = 510
Score = 35.1 bits (77), Expect = 8e-04
Identities = 30/146 (20%), Positives = 57/146 (39%), Gaps = 8/146 (5%)
Frame = +1
Query: 94 SLSLMIDSLLATYDRDSPPD----SKIVVNLTLHLRHAN-IRESESTVRIQADLQMNWID 258
++++++++LL Y+ + P + VV + +R + E + + + +W D
Sbjct: 36 NITMVLENLLMNYENNQLPTHGKGTPTVVKTNILIRSMGPVSELDMDYSMDCYFRQSWRD 95
Query: 259 KRLSWNAGEWGCSTWLVSSERLWRPDXXXXXXXXXXXGDYAL---RXRVSNXGSVXWIKR 429
RLS+ S + ER+WRPD + R+S G + + R
Sbjct: 96 SRLSFLGPIKSLSLSIKMLERIWRPDTYFYNGKHSYVHTITVPNKLLRISQDGDILYSMR 155
Query: 430 LDISTXXSIXLXXRPTXXQTARFXXG 507
L I + L P Q+ G
Sbjct: 156 LTIKAKCPMELRNFPMDRQSCPLILG 181
>AF514804-1|AAM51823.1| 537|Apis mellifera neuronal nicotinic
acetylcholine receptoralpha-3 protein.
Length = 537
Score = 35.1 bits (77), Expect = 8e-04
Identities = 25/85 (29%), Positives = 37/85 (43%), Gaps = 8/85 (9%)
Frame = +1
Query: 106 MIDSLLATYDRDSPPDSKIVVNLTLHLR-------HANIRESESTVRIQADLQMNWIDKR 264
+ D LL+ Y+R P LT+ L N++ T + ++ W D +
Sbjct: 37 LYDDLLSNYNRLIRPVMNNTETLTVQLGLKLSQLIEMNLKNQVMTTNVW--VEQRWNDYK 94
Query: 265 LSWNAGEWGCSTWL-VSSERLWRPD 336
L WN E+G L V SE +W PD
Sbjct: 95 LKWNPEEYGGVEMLYVPSENIWLPD 119
>DQ667185-1|ABG75737.1| 447|Apis mellifera glutamate-gated chloride
channel protein.
Length = 447
Score = 34.3 bits (75), Expect = 0.001
Identities = 29/113 (25%), Positives = 49/113 (43%), Gaps = 9/113 (7%)
Frame = +1
Query: 25 ILFWLPFLLTCAIASAAECENATSLSLMIDSLLATYDRDSPP------DSKIVVNLTLHL 186
+L L FLL + + + ++D++L YD P D +V + L +
Sbjct: 8 LLVLLTFLLHPSRCTQGKVNYREKEKEVLDNILGGYDARIRPSGENATDGPAIVRVNLFV 67
Query: 187 RH-ANIRESESTVRIQADLQMNWIDKRLSWN--AGEWGCSTWLVSSERLWRPD 336
R A I + + +Q + W+D+RL +N G T L + R+W PD
Sbjct: 68 RSIATISDIKMEYSVQLTFREQWLDERLRFNDFGGRLKYLT-LTDASRVWMPD 119
>DQ026038-1|AAY87897.1| 520|Apis mellifera nicotinic acetylcholine
receptor beta1subunit protein.
Length = 520
Score = 34.3 bits (75), Expect = 0.001
Identities = 26/123 (21%), Positives = 50/123 (40%), Gaps = 6/123 (4%)
Frame = +1
Query: 157 KIVVNLTL-HLRHANIRESESTVRIQADLQMNWIDKRLSWNAGEW-GCSTWLVSSERLWR 330
K+ VN L ++ N+ E ++ L+ W D +L W+ ++ G + +++W+
Sbjct: 51 KVHVNFGLAFVQLINVNEKNQIMKSNVWLRFIWTDYQLQWDEADYGGIGVLRLPPDKVWK 110
Query: 331 PDXXXXXXXXXXXGDYALRXR----VSNXGSVXWIKRLDISTXXSIXLXXRPTXXQTARF 498
PD G+Y +R + + G V W+ + +I + P QT
Sbjct: 111 PD---IVLFNNADGNYEVRYKSNVLIYPNGDVLWVPPAIYQSSCTIDVTYFPFDQQTCIM 167
Query: 499 XXG 507
G
Sbjct: 168 KFG 170
>DQ026037-1|AAY87896.1| 431|Apis mellifera nicotinic acetylcholine
receptor alpha9subunit protein.
Length = 431
Score = 33.5 bits (73), Expect = 0.002
Identities = 27/107 (25%), Positives = 48/107 (44%), Gaps = 5/107 (4%)
Frame = +1
Query: 31 FWLPFLLTCAIASAAECENATSLSLMIDSLLATYDRDSPPDS--KIVVNLTLHL--RHAN 198
F +LL C ++ T+L + L YD + P S +I N+T+ L +
Sbjct: 27 FGFSYLLNCK-----NYDHPTTLLKLKRYLFCEYDPNVRPISSHQIANNVTMQLLPKLME 81
Query: 199 IRESESTVRIQADLQMNWIDKRLSWNAGEW-GCSTWLVSSERLWRPD 336
+ S + + + + + W D LSW ++ G + V S+ +W PD
Sbjct: 82 FDDWTSVMELHSWMTLMWTDSHLSWKPSDFDGINYIYVKSDDIWVPD 128
>DQ026034-1|AAY87893.1| 569|Apis mellifera nicotinic acetylcholine
receptor alpha4subunit protein.
Length = 569
Score = 33.5 bits (73), Expect = 0.002
Identities = 21/83 (25%), Positives = 42/83 (50%), Gaps = 6/83 (7%)
Frame = +1
Query: 106 MIDSLLATYDRDSPP--DSKIVVNLTLHLRHANIRESESTVRIQAD---LQMNWIDKRLS 270
+ D LL+ Y++ P ++ V+ + + L+ + + + +I ++ +W D +L
Sbjct: 32 LYDDLLSNYNKLVRPVVNTSDVLRVCIKLKLSQLIDVNLKNQIMTTNLWVEQSWYDYKLR 91
Query: 271 WNAGEWGCSTWL-VSSERLWRPD 336
W E+G L V S+ +WRPD
Sbjct: 92 WEPKEYGGVKMLHVPSDHIWRPD 114
>DQ026033-1|AAY87892.1| 569|Apis mellifera nicotinic acetylcholine
receptor alpha4subunit protein.
Length = 569
Score = 33.5 bits (73), Expect = 0.002
Identities = 21/83 (25%), Positives = 42/83 (50%), Gaps = 6/83 (7%)
Frame = +1
Query: 106 MIDSLLATYDRDSPP--DSKIVVNLTLHLRHANIRESESTVRIQAD---LQMNWIDKRLS 270
+ D LL+ Y++ P ++ V+ + + L+ + + + +I ++ +W D +L
Sbjct: 32 LYDDLLSNYNKLVRPVVNTSDVLRVCIKLKLSQLIDVNLKNQIMTTNLWVEQSWYDYKLR 91
Query: 271 WNAGEWGCSTWL-VSSERLWRPD 336
W E+G L V S+ +WRPD
Sbjct: 92 WEPKEYGGVKMLHVPSDHIWRPD 114
>AY500239-1|AAR92109.1| 555|Apis mellifera neuronal nicotinic
acetylcholine receptoralpha7-1 protein.
Length = 555
Score = 33.5 bits (73), Expect = 0.002
Identities = 28/129 (21%), Positives = 52/129 (40%), Gaps = 7/129 (5%)
Frame = +1
Query: 58 AIASAAECENATSLSLMIDSLLATYDRDSPP----DSKIVVNLTLHLRHA-NIRESESTV 222
A+A++ + +++ LL TY+ P +V++ L L ++ E +
Sbjct: 11 ALAASGLVNGGSHEKRLLNDLLDTYNVLERPVGNESEPLVLSFGLTLMQIIDVDEKNQLL 70
Query: 223 RIQADLQMNWIDKRLSWNAGEWGCSTWL-VSSERLWRPD-XXXXXXXXXXXGDYALRXRV 396
L++ W D + WN ++G L + RLW+PD G Y V
Sbjct: 71 ITNLWLKLEWNDVNMRWNVSDYGGVRDLRIPPHRLWKPDVLMYNSADEGFDGTYPTNVVV 130
Query: 397 SNXGSVXWI 423
N G+ ++
Sbjct: 131 KNNGTCLYV 139
>AB270697-1|BAF75928.1| 735|Apis mellifera FoxP protein protein.
Length = 735
Score = 22.6 bits (46), Expect = 4.5
Identities = 8/14 (57%), Positives = 10/14 (71%)
Frame = -3
Query: 303 PSAAAPLPCVPTQS 262
PSA AP+P +P S
Sbjct: 411 PSAGAPMPPIPNMS 424
>DQ667192-1|ABG75744.1| 489|Apis mellifera pH-sensitive chloride
channel variant 4 protein.
Length = 489
Score = 21.8 bits (44), Expect = 7.8
Identities = 8/17 (47%), Positives = 11/17 (64%)
Frame = -1
Query: 56 QVRRNGNQNNISRRHFI 6
++ RNG N + RRH I
Sbjct: 167 RIYRNGTVNYLMRRHLI 183
>DQ667191-1|ABG75743.1| 475|Apis mellifera pH-sensitive chloride
channel variant 3 protein.
Length = 475
Score = 21.8 bits (44), Expect = 7.8
Identities = 8/17 (47%), Positives = 11/17 (64%)
Frame = -1
Query: 56 QVRRNGNQNNISRRHFI 6
++ RNG N + RRH I
Sbjct: 167 RIYRNGTVNYLMRRHLI 183
>DQ667190-1|ABG75742.1| 509|Apis mellifera pH-sensitive chloride
channel variant 1 protein.
Length = 509
Score = 21.8 bits (44), Expect = 7.8
Identities = 8/17 (47%), Positives = 11/17 (64%)
Frame = -1
Query: 56 QVRRNGNQNNISRRHFI 6
++ RNG N + RRH I
Sbjct: 218 RIYRNGTVNYLMRRHLI 234
>DQ667189-1|ABG75741.1| 458|Apis mellifera pH-sensitive chloride
channel protein.
Length = 458
Score = 21.8 bits (44), Expect = 7.8
Identities = 8/17 (47%), Positives = 11/17 (64%)
Frame = -1
Query: 56 QVRRNGNQNNISRRHFI 6
++ RNG N + RRH I
Sbjct: 167 RIYRNGTVNYLMRRHLI 183
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 179,649
Number of Sequences: 438
Number of extensions: 4233
Number of successful extensions: 38
Number of sequences better than 10.0: 27
Number of HSP's better than 10.0 without gapping: 37
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 37
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 25974678
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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