Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP11_FL5_G09
(832 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
07_01_0862 - 7172083-7172931 35 0.069
10_01_0100 + 1209424-1209538,1210373-1211073,1211158-1211379,121... 33 0.21
02_05_0686 - 30900748-30902167,30903442-30904742 32 0.64
11_06_0610 - 25449085-25453284 31 1.5
10_08_0847 + 21006842-21007042,21007173-21007261,21012226-210124... 30 2.0
08_02_0743 - 20647440-20647927,20647997-20648426,20650127-206505... 30 2.6
04_01_0001 + 48461-48625,49314-50491,50620-50816,50896-52076 30 2.6
09_04_0430 + 17502387-17503505 29 3.4
01_05_0490 + 22672241-22674679 29 4.5
08_01_0375 - 3307206-3307316,3307870-3307965,3308061-3308132,330... 29 6.0
02_01_0275 - 1828300-1828344,1828396-1828531,1828623-1829317 29 6.0
03_02_0631 + 9969841-9969868,9969965-9970082,9970186-9970828,997... 28 7.9
02_04_0021 + 18975992-18976408 28 7.9
>07_01_0862 - 7172083-7172931
Length = 282
Score = 35.1 bits (77), Expect = 0.069
Identities = 15/31 (48%), Positives = 17/31 (54%)
Frame = +3
Query: 711 PPKKKKXXXGXPXPPQKKXXXXXPXPPPKKK 803
PP+KK P PP+KK P PPKKK
Sbjct: 151 PPRKKAMLFPLPLPPRKKPLLYPPPLPPKKK 181
Score = 31.5 bits (68), Expect = 0.85
Identities = 15/40 (37%), Positives = 17/40 (42%)
Frame = +1
Query: 712 PPKKKXGXXGXXAPPKKKXXXXXXXXPPKKKXXXGXXXPP 831
PP+KK PP+KK PPKKK PP
Sbjct: 151 PPRKKAMLFPLPLPPRKKPLLYPPPLPPKKKPLPPPSPPP 190
Score = 29.5 bits (63), Expect = 3.4
Identities = 13/29 (44%), Positives = 16/29 (55%)
Frame = +3
Query: 711 PPKKKKXXXGXPXPPQKKXXXXXPXPPPK 797
PP+KK P PP+KK P PPP+
Sbjct: 164 PPRKKPLLYPPPLPPKKKPLPP-PSPPPQ 191
>10_01_0100 +
1209424-1209538,1210373-1211073,1211158-1211379,
1211452-1211878,1212091-1213219,1213623-1213746,
1214207-1214278,1215480-1215578,1215617-1215640,
1215704-1215745,1215815-1215895,1215983-1216114,
1216115-1216196,1216271-1216365,1218499-1218570,
1218676-1218792,1219379-1219447,1219521-1219587,
1219886-1220025
Length = 1269
Score = 33.5 bits (73), Expect = 0.21
Identities = 25/107 (23%), Positives = 27/107 (25%)
Frame = -1
Query: 553 PPXPHKGXXRXXKXXXXPPXPPXQXAPXXXPXKKXXXXGXGXAPRXPXRXGXXEXKXKXP 374
PP P K PP PP P P P P P
Sbjct: 546 PPPPPPPPPSGNKPAFSPPPPPPPPPPPPLPQSNYASSQPPPPPPPPPLPNCLVPSPPPP 605
Query: 373 PXPPPLFLXXAAPXXXXXXGPXXXTPPRXXDRXXPXXRXXXXPPXGP 233
P PPP+ + P P PP P PP P
Sbjct: 606 PPPPPILPNRSVPP------PPPPPPPLPNHSVLPPPPPPPPPPSLP 646
Score = 28.3 bits (60), Expect = 7.9
Identities = 20/75 (26%), Positives = 20/75 (26%), Gaps = 1/75 (1%)
Frame = -1
Query: 556 GPPXPHKGXXRXXKXXXXPPXPPXQXAPXXXPXKKXXXXGXGXAPRXPXRXGXXEXKXKX 377
GPP P P P P P AP P K
Sbjct: 688 GPPPPPPPPLPPANRTNGPGVPSAPPPPPPPPPANRSNGPSAPAPPLPPPLPAAANKRNP 747
Query: 376 P-PXPPPLFLXXAAP 335
P P PPPL AP
Sbjct: 748 PAPPPPPLMTGKKAP 762
>02_05_0686 - 30900748-30902167,30903442-30904742
Length = 906
Score = 31.9 bits (69), Expect = 0.64
Identities = 19/59 (32%), Positives = 20/59 (33%), Gaps = 2/59 (3%)
Frame = -3
Query: 368 PXPSXPX--GRRPPXXXXXRAXXXDTAXXXXPXXPXXPXXXXAPXXPXXKKXPPPPXXK 198
P PS P GR P A + P P P P P K PPPP K
Sbjct: 284 PSPSLPLPPGRESPSRPQSIAAAAVASPAPPPPPPPKPAAAAPPPPPPPKAAPPPPPPK 342
Score = 31.1 bits (67), Expect = 1.1
Identities = 21/65 (32%), Positives = 23/65 (35%)
Frame = -1
Query: 553 PPXPHKGXXRXXKXXXXPPXPPXQXAPXXXPXKKXXXXGXGXAPRXPXRXGXXEXKXKXP 374
PP P K PP PP + P P K G +P P G K P
Sbjct: 328 PPPPPKAAPPPPPPKGPPPPPPAKGPPPPPPPK-------GPSPPPPPPPG---GKKGGP 377
Query: 373 PXPPP 359
P PPP
Sbjct: 378 PPPPP 382
Score = 29.9 bits (64), Expect = 2.6
Identities = 15/33 (45%), Positives = 15/33 (45%)
Frame = +3
Query: 708 PPPKKKKXXXGXPXPPQKKXXXXXPXPPPKKKK 806
PPP K G P PP K P PPP KK
Sbjct: 345 PPPPPAK---GPPPPPPPKGPSPPPPPPPGGKK 374
Score = 28.3 bits (60), Expect = 7.9
Identities = 16/48 (33%), Positives = 17/48 (35%)
Frame = -1
Query: 502 PPXPPXQXAPXXXPXKKXXXXGXGXAPRXPXRXGXXEXKXKXPPXPPP 359
PP PP + AP P K P P K PP PPP
Sbjct: 327 PPPPPPKAAPPPPPPKGPPPPPPAKGPPPP-----PPPKGPSPPPPPP 369
>11_06_0610 - 25449085-25453284
Length = 1399
Score = 30.7 bits (66), Expect = 1.5
Identities = 25/105 (23%), Positives = 33/105 (31%), Gaps = 3/105 (2%)
Frame = -3
Query: 512 AXXPPPPAXAXXAPXXPXXKXXXXXXGXXPPXAXXXRXXXXEXXEXXXPXPSXPXGRRPP 333
A PPPPA P P PP + E P S P + PP
Sbjct: 724 ASSPPPPAPEGHTPSPPKSSPPEEKSPPIPPTS-HTSPPTPEEYTPSPPKSSPPEEKSPP 782
Query: 332 XXXXXRAXXXD---TAXXXXPXXPXXPXXXXAPXXPXXKKXPPPP 207
++ + T+ P P +P P +K P PP
Sbjct: 783 PHSPEKSPPSEAHPTSPPPSEKSPPTPAEESSP--PTPEKSPSPP 825
>10_08_0847 +
21006842-21007042,21007173-21007261,21012226-21012429,
21016334-21016568,21016760-21016952,21017472-21017503,
21019172-21019236,21020766-21020985,21021172-21021370,
21021728-21021768,21023366-21023404,21023699-21023734,
21023767-21023798,21024264-21024426,21024602-21024653,
21024699-21024794,21024911-21025023,21026536-21026615,
21027343-21027577,21027765-21027890,21027994-21028092
Length = 849
Score = 30.3 bits (65), Expect = 2.0
Identities = 13/32 (40%), Positives = 18/32 (56%)
Frame = -2
Query: 105 DPDFSGCFFGGIVTKDGESVPVGQPVLEEFQD 10
D DFSG +F G+ T D + P + +E QD
Sbjct: 93 DDDFSGSYFAGLQTWDDPTGPSDEYTFKELQD 124
>08_02_0743 -
20647440-20647927,20647997-20648426,20650127-20650570,
20650639-20650692
Length = 471
Score = 29.9 bits (64), Expect = 2.6
Identities = 19/73 (26%), Positives = 25/73 (34%)
Frame = -1
Query: 553 PPXPHKGXXRXXKXXXXPPXPPXQXAPXXXPXKKXXXXGXGXAPRXPXRXGXXEXKXKXP 374
PP +G + PP PP +P P + + P G K K
Sbjct: 86 PPKRGRGRPPKPRDPNAPPPPPKPSSPR--PRGRPPKSKDPISDAIPKSRGRPPKKAKTA 143
Query: 373 PXPPPLFLXXAAP 335
P PPP +AP
Sbjct: 144 PAPPPAAGDGSAP 156
>04_01_0001 + 48461-48625,49314-50491,50620-50816,50896-52076
Length = 906
Score = 29.9 bits (64), Expect = 2.6
Identities = 23/99 (23%), Positives = 23/99 (23%)
Frame = -3
Query: 503 PPPPAXAXXAPXXPXXKXXXXXXGXXPPXAXXXRXXXXEXXEXXXPXPSXPXGRRPPXXX 324
PPPPA P G PP P P P P
Sbjct: 276 PPPPAGPPPPAPPPLPPSHHHHHGHHPPPPHPLPPGAGAGAGTGAPPPP-PAHPAAPAPP 334
Query: 323 XXRAXXXDTAXXXXPXXPXXPXXXXAPXXPXXKKXPPPP 207
P P P AP P PPPP
Sbjct: 335 PPAPSPSAAGAGSGPPPPPPPAAPAAPRPPGPGPGPPPP 373
>09_04_0430 + 17502387-17503505
Length = 372
Score = 29.5 bits (63), Expect = 3.4
Identities = 16/51 (31%), Positives = 20/51 (39%)
Frame = -1
Query: 394 EXKXKXPPXPPPLFLXXAAPXXXXXXGPXXXTPPRXXDRXXPXXRXXXXPP 242
+ + + PP P P AAP P TPPR + P R PP
Sbjct: 165 QPQPQPPPQPTP---PRAAPLPTPPRAPPQSTPPRAAPQSTPPQRVAPQPP 212
>01_05_0490 + 22672241-22674679
Length = 812
Score = 29.1 bits (62), Expect = 4.5
Identities = 25/99 (25%), Positives = 29/99 (29%)
Frame = -1
Query: 655 PPPXGGFFFXXNKKXXXKXXXGGGXXXLFXFXXGPPXPHKGXXRXXKXXXXPPXPPXQXA 476
PPP F+ KK GG PP P + PP PP + A
Sbjct: 612 PPPPSSIFYNLFKK--------GGSKSRRIHSVAPPQPPPPPPPTTRRSRKPPQPPSRPA 663
Query: 475 PXXXPXKKXXXXGXGXAPRXPXRXGXXEXKXKXPPXPPP 359
P P + PR PP PPP
Sbjct: 664 PPPPPPPQQQPP---FYPRRAVVYYTYPLPPPSPPLPPP 699
>08_01_0375 -
3307206-3307316,3307870-3307965,3308061-3308132,
3308247-3308315,3308427-3308513,3308753-3308858,
3309118-3309237,3309327-3309406,3309497-3309878,
3310746-3310814,3311460-3312202
Length = 644
Score = 28.7 bits (61), Expect = 6.0
Identities = 27/99 (27%), Positives = 29/99 (29%)
Frame = -1
Query: 556 GPPXPHKGXXRXXKXXXXPPXPPXQXAPXXXPXKKXXXXGXGXAPRXPXRXGXXEXKXKX 377
GPP PH+ P PP Q P P P P G +
Sbjct: 61 GPPPPHQPQFNFG------PGPPQQQQPPPPPQMYY------QPPPPPPPYGVNSSQPPP 108
Query: 376 PPXPPPLFLXXAAPXXXXXXGPXXXTPPRXXDRXXPXXR 260
PP PPP A P P PPR P R
Sbjct: 109 PPPPPPSPPPSAPPPPPP---PPTQPPPREAQLAPPPPR 144
>02_01_0275 - 1828300-1828344,1828396-1828531,1828623-1829317
Length = 291
Score = 28.7 bits (61), Expect = 6.0
Identities = 11/32 (34%), Positives = 14/32 (43%)
Frame = +3
Query: 699 FXXPPPKKKKXXXGXPXPPQKKXXXXXPXPPP 794
+ PPP +KK P P + P PPP
Sbjct: 109 YRPPPPPRKKPQFQPPPQPPRAWDPSPPPPPP 140
>03_02_0631 +
9969841-9969868,9969965-9970082,9970186-9970828,
9971146-9971935,9972002-9972051,9972618-9972704
Length = 571
Score = 28.3 bits (60), Expect = 7.9
Identities = 12/30 (40%), Positives = 14/30 (46%)
Frame = +3
Query: 711 PPKKKKXXXGXPXPPQKKXXXXXPXPPPKK 800
PP +K P P QK P PPP+K
Sbjct: 80 PPPPQKPDKVSPPPAQKPSKVSPPPPPPQK 109
Score = 28.3 bits (60), Expect = 7.9
Identities = 12/33 (36%), Positives = 14/33 (42%)
Frame = +3
Query: 708 PPPKKKKXXXGXPXPPQKKXXXXXPXPPPKKKK 806
PPP +K P PP +K P P K K
Sbjct: 91 PPPAQKPSKVSPPPPPPQKSAKVSPPPAAKPPK 123
>02_04_0021 + 18975992-18976408
Length = 138
Score = 28.3 bits (60), Expect = 7.9
Identities = 15/41 (36%), Positives = 15/41 (36%)
Frame = +3
Query: 708 PPPKKKKXXXGXPXPPQKKXXXXXPXPPPKKKKXXGXXXXP 830
PPP K K P P K P PPP K G P
Sbjct: 97 PPPPKPKPTP-PPPAPTPKPPAPSPSPPPPKAAGHGVAGDP 136
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.316 0.143 0.473
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,684,310
Number of Sequences: 37544
Number of extensions: 429940
Number of successful extensions: 1191
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 680
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1074
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2291695380
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (22.0 bits)
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