Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP11_FL5_G07
         (1017 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY296059-1|AAQ62697.1| 1494|Homo sapiens BCL9-2 protein.               31   8.9  
AK123671-1|BAC85674.1|  520|Homo sapiens protein ( Homo sapiens ...    31   8.9  
AK027872-1|BAB55422.1|  509|Homo sapiens protein ( Homo sapiens ...    31   8.9  
AB094091-1|BAC76045.1| 1499|Homo sapiens DLNB11 protein.               31   8.9  

>AY296059-1|AAQ62697.1| 1494|Homo sapiens BCL9-2 protein.
          Length = 1494

 Score = 30.7 bits (66), Expect = 8.9
 Identities = 14/31 (45%), Positives = 16/31 (51%)
 Frame = -2

Query: 215 GFPKKKXPXXPPPPPXGPXXXGGGAPPXXFP 123
           G P+ + P  PPPPP  P    G APP   P
Sbjct: 292 GTPQSQPPPLPPPPPPAP----GSAPPALPP 318


>AK123671-1|BAC85674.1|  520|Homo sapiens protein ( Homo sapiens
           cDNA FLJ41677 fis, clone HCASM2002918. ).
          Length = 520

 Score = 30.7 bits (66), Expect = 8.9
 Identities = 12/24 (50%), Positives = 12/24 (50%)
 Frame = -2

Query: 194 PXXPPPPPXGPXXXGGGAPPXXFP 123
           P  PPPPP  P    GGA    FP
Sbjct: 459 PPPPPPPPPPPPPTAGGADSKNFP 482


>AK027872-1|BAB55422.1|  509|Homo sapiens protein ( Homo sapiens
           cDNA FLJ14966 fis, clone THYRO1000034, weakly similar to
           TRICHOHYALIN. ).
          Length = 509

 Score = 30.7 bits (66), Expect = 8.9
 Identities = 12/24 (50%), Positives = 12/24 (50%)
 Frame = -2

Query: 194 PXXPPPPPXGPXXXGGGAPPXXFP 123
           P  PPPPP  P    GGA    FP
Sbjct: 272 PPPPPPPPPPPPPTAGGADSKNFP 295


>AB094091-1|BAC76045.1| 1499|Homo sapiens DLNB11 protein.
          Length = 1499

 Score = 30.7 bits (66), Expect = 8.9
 Identities = 14/31 (45%), Positives = 16/31 (51%)
 Frame = -2

Query: 215 GFPKKKXPXXPPPPPXGPXXXGGGAPPXXFP 123
           G P+ + P  PPPPP  P    G APP   P
Sbjct: 297 GTPQSQPPPLPPPPPPAP----GSAPPALPP 323


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 85,895,937
Number of Sequences: 237096
Number of extensions: 1779714
Number of successful extensions: 12143
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 4263
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9401
length of database: 76,859,062
effective HSP length: 91
effective length of database: 55,283,326
effective search space used: 13654981522
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)