Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP11_FL5_G02
         (814 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

06_01_1087 + 8901950-8902102,8902960-8903996,8904438-8904586,890...    32   0.62 
03_04_0006 + 16257288-16259522                                         30   1.9  
06_03_0854 + 25400855-25403741,25406174-25407708                       29   3.3  
03_05_0560 + 25636969-25637227,25637744-25637793,25637813-25638748     29   4.4  
02_02_0483 - 10830978-10831284,10831727-10832232,10832770-10832856     29   4.4  
02_05_1242 - 35197944-35198118,35198276-35198332,35198780-351988...    29   5.8  
01_01_0387 + 2999222-2999495,2999834-2999934                           29   5.8  
11_03_0039 - 9145639-9146378,9149199-9149538                           28   7.7  

>06_01_1087 + 8901950-8902102,8902960-8903996,8904438-8904586,
            8905437-8905690,8905785-8908799,8908889-8909001,
            8909975-8910164,8910399-8910512,8910591-8910698,
            8910941-8911073,8911206-8911408,8911626-8911826
          Length = 1889

 Score = 31.9 bits (69), Expect = 0.62
 Identities = 15/51 (29%), Positives = 25/51 (49%)
 Frame = +2

Query: 158  DENSQMPRHLISDAHEWINEIPTVPIYYLAKPQPRERAWENQRGKKTLLSL 310
            D+ +  PR +  D  EW N  PT+   ++ + +PRE     Q+ K  +  L
Sbjct: 1391 DQGNCAPRTVECDEGEWYNNFPTIDENHVQRNKPREEQIFQQKLKPAIFIL 1441


>03_04_0006 + 16257288-16259522
          Length = 744

 Score = 30.3 bits (65), Expect = 1.9
 Identities = 20/54 (37%), Positives = 25/54 (46%), Gaps = 3/54 (5%)
 Frame = -3

Query: 371 AKRSP---TYATXLMSPYNARLESSSTGSSFPADSPKPVPLAVVSLDSR*GQWE 219
           A+RSP    Y T L +   ARL    T    PA SP    +AV S   + G W+
Sbjct: 162 ARRSPWTVVYGTNLRTGETARLTPRGTFDLSPAVSPSGKRVAVASWQGKPGLWD 215


>06_03_0854 + 25400855-25403741,25406174-25407708
          Length = 1473

 Score = 29.5 bits (63), Expect = 3.3
 Identities = 15/42 (35%), Positives = 23/42 (54%)
 Frame = -3

Query: 371 AKRSPTYATXLMSPYNARLESSSTGSSFPADSPKPVPLAVVS 246
           AKR+PT  T    P  AR  +++   +F   +P P P +V+S
Sbjct: 475 AKRAPTAVTVGAPPPQARTPAAAPAKAF-VSAPAPAPSSVIS 515


>03_05_0560 + 25636969-25637227,25637744-25637793,25637813-25638748
          Length = 414

 Score = 29.1 bits (62), Expect = 4.4
 Identities = 11/19 (57%), Positives = 12/19 (63%)
 Frame = -2

Query: 486 WERNPRAPAGYYGPXHRFP 430
           W+RNP  P GYYG    FP
Sbjct: 257 WKRNPPIPQGYYGCCLVFP 275


>02_02_0483 - 10830978-10831284,10831727-10832232,10832770-10832856
          Length = 299

 Score = 29.1 bits (62), Expect = 4.4
 Identities = 17/41 (41%), Positives = 20/41 (48%)
 Frame = -1

Query: 517 GFPPGHXXARXGTKPPGARRILWTGAPVSGPTGVSNETNES 395
           G P     AR  T+PPG R      A  S P G+SNE  E+
Sbjct: 164 GGPRTLSTARKSTRPPGKRPKPDPEATTSEPWGLSNEETET 204


>02_05_1242 -
           35197944-35198118,35198276-35198332,35198780-35198853,
           35198954-35199028,35199295-35199349,35199574-35199647,
           35200446-35200579,35200660-35200746,35200838-35200967
          Length = 286

 Score = 28.7 bits (61), Expect = 5.8
 Identities = 10/16 (62%), Positives = 12/16 (75%)
 Frame = -2

Query: 480 RNPRAPAGYYGPXHRF 433
           R+P AP GYYGP H +
Sbjct: 16  RDPFAPIGYYGPPHGY 31


>01_01_0387 + 2999222-2999495,2999834-2999934
          Length = 124

 Score = 28.7 bits (61), Expect = 5.8
 Identities = 16/42 (38%), Positives = 20/42 (47%), Gaps = 1/42 (2%)
 Frame = -2

Query: 546 HGGXFKGGXXGFRQVTXXHGWERNPRAPAGYYGPXH-RFPAQ 424
           HGG   GG  G+ Q    HG+  +  A  G Y P H  +P Q
Sbjct: 29  HGGGH-GGGHGYEQGYGGHGYPPHAGAAHGAYPPQHGAYPPQ 69


>11_03_0039 - 9145639-9146378,9149199-9149538
          Length = 359

 Score = 28.3 bits (60), Expect = 7.7
 Identities = 9/13 (69%), Positives = 10/13 (76%)
 Frame = -2

Query: 486 WERNPRAPAGYYG 448
           W+RNP  P GYYG
Sbjct: 201 WKRNPPVPQGYYG 213


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,529,398
Number of Sequences: 37544
Number of extensions: 421952
Number of successful extensions: 1046
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 1010
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1046
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2221181676
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)