Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP11_FL5_F22
         (852 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

01_05_0423 + 22032940-22033695                                         30   2.7  
04_04_1351 - 32827136-32827984                                         28   8.2  

>01_05_0423 + 22032940-22033695
          Length = 251

 Score = 29.9 bits (64), Expect = 2.7
 Identities = 11/22 (50%), Positives = 11/22 (50%)
 Frame = -2

Query: 551 FFXXPPPPPXGXXFFFFXXPPP 486
           F   PPPPP G     F  PPP
Sbjct: 164 FLPSPPPPPQGQQQLLFLPPPP 185


>04_04_1351 - 32827136-32827984
          Length = 282

 Score = 28.3 bits (60), Expect = 8.2
 Identities = 11/20 (55%), Positives = 11/20 (55%)
 Frame = +3

Query: 6  GGENXXPXGGGGXXPFXGGG 65
          GG    P GGGG  P  GGG
Sbjct: 24 GGSGSAPSGGGGSAPSGGGG 43


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,019,083
Number of Sequences: 37544
Number of extensions: 252240
Number of successful extensions: 10118
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 1555
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4082
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2373961368
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)