Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP11_FL5_F21
(1084 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
10_07_0134 + 13289641-13290216,13290435-13290914 32 0.91
12_01_0252 + 1868670-1869200,1870167-1871120 31 1.6
10_01_0100 + 1209424-1209538,1210373-1211073,1211158-1211379,121... 31 1.6
01_05_0490 + 22672241-22674679 31 1.6
11_02_0065 - 7938007-7938393,7939292-7939435,7940597-7940665,794... 30 2.8
09_04_0368 + 17005231-17005437,17005707-17005963,17006061-170061... 30 2.8
06_01_0941 + 7241050-7241331 30 3.7
01_06_0604 + 30536172-30537143 30 3.7
07_01_0678 - 5103836-5104613,5104697-5104888,5104994-5105036,510... 29 4.8
06_01_0561 - 3983308-3983564,3983652-3983775 29 6.4
01_07_0188 - 41866689-41866763,41866889-41867155,41867277-418677... 29 6.4
01_03_0005 + 11568545-11569119,11569179-11569191 29 6.4
10_08_0521 + 18500105-18500529,18501216-18501284,18501467-185015... 23 8.7
>10_07_0134 + 13289641-13290216,13290435-13290914
Length = 351
Score = 31.9 bits (69), Expect = 0.91
Identities = 15/39 (38%), Positives = 15/39 (38%)
Frame = -1
Query: 853 PPPPXXXXKKKXXGGGGGGXXXXXXXXXXXXGGGGGXKK 737
PPPP GGGG GGGGG KK
Sbjct: 67 PPPPMYEASGGDGGGGGAASEDEEDGCGGGGGGGGGEKK 105
>12_01_0252 + 1868670-1869200,1870167-1871120
Length = 494
Score = 31.1 bits (67), Expect = 1.6
Identities = 16/37 (43%), Positives = 16/37 (43%)
Frame = -1
Query: 856 PPPPPXXXXKKKXXGGGGGGXXXXXXXXXXXXGGGGG 746
PPPPP GGGGGG GGGGG
Sbjct: 63 PPPPPPPPLNWPTAGGGGGG---SGGGGRGGAGGGGG 96
Score = 29.9 bits (64), Expect = 3.7
Identities = 11/20 (55%), Positives = 12/20 (60%)
Frame = +3
Query: 798 PPPPPPXXFFFXXXXGGGGG 857
PPPPPP + GGGGG
Sbjct: 63 PPPPPPPPLNWPTAGGGGGG 82
>10_01_0100 +
1209424-1209538,1210373-1211073,1211158-1211379,
1211452-1211878,1212091-1213219,1213623-1213746,
1214207-1214278,1215480-1215578,1215617-1215640,
1215704-1215745,1215815-1215895,1215983-1216114,
1216115-1216196,1216271-1216365,1218499-1218570,
1218676-1218792,1219379-1219447,1219521-1219587,
1219886-1220025
Length = 1269
Score = 31.1 bits (67), Expect = 1.6
Identities = 16/55 (29%), Positives = 16/55 (29%)
Frame = +3
Query: 798 PPPPPPXXFFFXXXXGGGGGXKXXXXXXXPPXXXXXXXKKKKXXXXXPPPPXNPP 962
PPPPPP G K PP PPPP PP
Sbjct: 666 PPPPPPPRSSSRTPTGAATSSKGPPPPPPPPLPPANRTNGPGVPSAPPPPPPPPP 720
Score = 29.1 bits (62), Expect = 6.4
Identities = 16/59 (27%), Positives = 16/59 (27%)
Frame = +3
Query: 786 KXXXPPPPPPXXFFFXXXXGGGGGXKXXXXXXXPPXXXXXXXKKKKXXXXXPPPPXNPP 962
K PPPPPP G PP PPPP PP
Sbjct: 661 KFPAPPPPPPPPRSSSRTPTGAATSSKGPPPPPPPPLPPANRTNGPGVPSAPPPPPPPP 719
>01_05_0490 + 22672241-22674679
Length = 812
Score = 31.1 bits (67), Expect = 1.6
Identities = 15/54 (27%), Positives = 16/54 (29%)
Frame = +3
Query: 798 PPPPPPXXFFFXXXXGGGGGXKXXXXXXXPPXXXXXXXKKKKXXXXXPPPPXNP 959
PPPPPP F GG PP + P PP P
Sbjct: 609 PPPPPPPSSIFYNLFKKGGSKSRRIHSVAPPQPPPPPPPTTRRSRKPPQPPSRP 662
Score = 30.7 bits (66), Expect = 2.1
Identities = 17/60 (28%), Positives = 20/60 (33%), Gaps = 5/60 (8%)
Frame = +3
Query: 798 PPPPPPXXFFFXXXXGGGGGXK-----XXXXXXXPPXXXXXXXKKKKXXXXXPPPPXNPP 962
PPPPPP F+ GG + PP +K P PP PP
Sbjct: 610 PPPPPPSSIFYNLFKKGGSKSRRIHSVAPPQPPPPPPPTTRRSRKPPQPPSRPAPPPPPP 669
>11_02_0065 -
7938007-7938393,7939292-7939435,7940597-7940665,
7940762-7940809,7941488-7941584,7941688-7941767,
7941841-7941912,7942256-7942350,7943903-7943984,
7945176-7945209,7945255-7945262,7945657-7946058
Length = 505
Score = 30.3 bits (65), Expect = 2.8
Identities = 11/19 (57%), Positives = 12/19 (63%)
Frame = +3
Query: 801 PPPPPXXFFFXXXXGGGGG 857
PPPPP F + GGGGG
Sbjct: 79 PPPPPPPFEYYPAVGGGGG 97
Score = 29.5 bits (63), Expect = 4.8
Identities = 10/19 (52%), Positives = 12/19 (63%)
Frame = +3
Query: 798 PPPPPPXXFFFXXXXGGGG 854
PPPPPP ++ GGGG
Sbjct: 79 PPPPPPPFEYYPAVGGGGG 97
>09_04_0368 +
17005231-17005437,17005707-17005963,17006061-17006115,
17006196-17006276,17006357-17006453,17006560-17006627,
17006788-17006886,17007008-17007049,17007124-17007263,
17007882-17008018,17008275-17008444
Length = 450
Score = 30.3 bits (65), Expect = 2.8
Identities = 11/20 (55%), Positives = 12/20 (60%)
Frame = -1
Query: 856 PPPPPXXXXKKKXXGGGGGG 797
PPPPP + GGGGGG
Sbjct: 17 PPPPPPGSSSGRGGGGGGGG 36
>06_01_0941 + 7241050-7241331
Length = 93
Score = 29.9 bits (64), Expect = 3.7
Identities = 11/20 (55%), Positives = 12/20 (60%)
Frame = -1
Query: 856 PPPPPXXXXKKKXXGGGGGG 797
PPPP K+ GGGGGG
Sbjct: 20 PPPPSSSSGKRSGGGGGGGG 39
>01_06_0604 + 30536172-30537143
Length = 323
Score = 29.9 bits (64), Expect = 3.7
Identities = 12/22 (54%), Positives = 12/22 (54%)
Frame = +3
Query: 798 PPPPPPXXFFFXXXXGGGGGXK 863
PPPPPP F GG GG K
Sbjct: 43 PPPPPPLAFPSYSRLGGAGGKK 64
>07_01_0678 -
5103836-5104613,5104697-5104888,5104994-5105036,
5105712-5105835,5105924-5106016,5106754-5106931,
5107032-5107138,5108098-5108179,5108277-5108314,
5108409-5108495,5109025-5109135,5109282-5109773
Length = 774
Score = 29.5 bits (63), Expect = 4.8
Identities = 11/25 (44%), Positives = 13/25 (52%)
Frame = -1
Query: 871 KXXXXPPPPPXXXXKKKXXGGGGGG 797
K PPPPP ++ GGG GG
Sbjct: 98 KPKPPPPPPPERPRRRAAAGGGAGG 122
>06_01_0561 - 3983308-3983564,3983652-3983775
Length = 126
Score = 29.1 bits (62), Expect = 6.4
Identities = 14/39 (35%), Positives = 14/39 (35%)
Frame = -1
Query: 856 PPPPPXXXXKKKXXGGGGGGXXXXXXXXXXXXGGGGGXK 740
PPPPP GGG GGGGG K
Sbjct: 33 PPPPPPPPSGAAAGEDNGGGSAIWAGVVAADTGGGGGEK 71
>01_07_0188 -
41866689-41866763,41866889-41867155,41867277-41867722,
41867945-41868033,41868279-41868368,41868661-41868739,
41868979-41869042,41869597-41869684,41869776-41869836,
41869906-41869969,41870134-41870188,41870275-41870346,
41870469-41870551,41870629-41870724,41871279-41871383,
41872159-41872227,41872470-41872561,41872667-41872886
Length = 704
Score = 29.1 bits (62), Expect = 6.4
Identities = 11/20 (55%), Positives = 11/20 (55%)
Frame = -1
Query: 856 PPPPPXXXXKKKXXGGGGGG 797
PPPPP GGGGGG
Sbjct: 10 PPPPPPQHPPPPQAGGGGGG 29
>01_03_0005 + 11568545-11569119,11569179-11569191
Length = 195
Score = 29.1 bits (62), Expect = 6.4
Identities = 15/36 (41%), Positives = 15/36 (41%)
Frame = -1
Query: 853 PPPPXXXXKKKXXGGGGGGXXXXXXXXXXXXGGGGG 746
PPPP GGGGGG GGGGG
Sbjct: 70 PPPPSYP--SGGGGGGGGGTVMYTSPPPPYSGGGGG 103
>10_08_0521 +
18500105-18500529,18501216-18501284,18501467-18501555,
18501726-18501838,18502023-18502124,18502576-18502663,
18502795-18503361,18503766-18504149,18504168-18504384,
18504466-18504548,18505174-18505256,18505796-18506032,
18506481-18506658,18506814-18507328,18507740-18507916,
18508385-18508768,18508885-18509031
Length = 1285
Score = 23.4 bits (48), Expect(2) = 8.7
Identities = 9/20 (45%), Positives = 11/20 (55%)
Frame = -1
Query: 856 PPPPPXXXXKKKXXGGGGGG 797
P PPP ++ GGGG G
Sbjct: 38 PTPPPKDQQQEGQGGGGGVG 57
Score = 23.4 bits (48), Expect(2) = 8.7
Identities = 10/23 (43%), Positives = 10/23 (43%)
Frame = -1
Query: 814 GGGGGGXXXXXXXXXXXXGGGGG 746
GGGGGG GGGG
Sbjct: 80 GGGGGGVGDVEGGGGGGGAGGGG 102
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,845,844
Number of Sequences: 37544
Number of extensions: 556245
Number of successful extensions: 11980
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 1996
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8247
length of database: 14,793,348
effective HSP length: 83
effective length of database: 11,677,196
effective search space used: 3234583292
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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