Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP11_FL5_F18
         (739 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

12_01_0033 - 272848-272943,274026-274169,274264-274375,274521-27...    29   3.9  
09_06_0188 - 21441377-21442201                                         29   3.9  
03_05_0067 - 20460206-20460703,20461255-20461530                       29   3.9  
02_05_0686 - 30900748-30902167,30903442-30904742                       29   5.1  
02_01_0458 + 3291563-3291733,3292082-3292769,3292847-3293363,329...    28   6.7  
08_01_0003 + 30085-30195,30289-30365,31080-31136,31668-33560,336...    28   8.9  

>12_01_0033 -
           272848-272943,274026-274169,274264-274375,274521-274702,
           274781-274912,275038-276330,279841-280545,280649-280695,
           280787-280865
          Length = 929

 Score = 29.1 bits (62), Expect = 3.9
 Identities = 12/30 (40%), Positives = 12/30 (40%)
 Frame = +3

Query: 474 PPPPPXXXXXXPPPXXXFXXGGPXXAXXXP 563
           PPPPP      PPP      GGP      P
Sbjct: 614 PPPPPRPPGAPPPPPPPGKPGGPPPPPPRP 643


>09_06_0188 - 21441377-21442201
          Length = 274

 Score = 29.1 bits (62), Expect = 3.9
 Identities = 12/22 (54%), Positives = 12/22 (54%)
 Frame = -1

Query: 538 PPXKKXXXGGGXXXXXXGGGGG 473
           PP KK   GGG      GGGGG
Sbjct: 192 PPSKKSRRGGGSGGGGGGGGGG 213


>03_05_0067 - 20460206-20460703,20461255-20461530
          Length = 257

 Score = 29.1 bits (62), Expect = 3.9
 Identities = 11/23 (47%), Positives = 11/23 (47%)
 Frame = +3

Query: 474 PPPPPXXXXXXPPPXXXFXXGGP 542
           PPPPP      PPP   F  G P
Sbjct: 4   PPPPPQWAMGPPPPPQYFQAGPP 26


>02_05_0686 - 30900748-30902167,30903442-30904742
          Length = 906

 Score = 28.7 bits (61), Expect = 5.1
 Identities = 11/23 (47%), Positives = 11/23 (47%)
 Frame = +3

Query: 474 PPPPPXXXXXXPPPXXXFXXGGP 542
           PPPPP      PPP      GGP
Sbjct: 355 PPPPPKGPSPPPPPPPGGKKGGP 377


>02_01_0458 +
           3291563-3291733,3292082-3292769,3292847-3293363,
           3293438-3293637,3294137-3294372,3294469-3295302
          Length = 881

 Score = 28.3 bits (60), Expect = 6.7
 Identities = 11/26 (42%), Positives = 11/26 (42%)
 Frame = +3

Query: 474 PPPPPXXXXXXPPPXXXFXXGGPXXA 551
           PPPPP      PPP      G P  A
Sbjct: 363 PPPPPPPPPRPPPPPPPIKKGAPPPA 388


>08_01_0003 + 30085-30195,30289-30365,31080-31136,31668-33560,
            33643-34147,34250-34358,34436-34548,34619-34806,
            35481-36129,36169-36691,36760-36911,37042-37141,
            37301-37416
          Length = 1530

 Score = 27.9 bits (59), Expect = 8.9
 Identities = 12/32 (37%), Positives = 12/32 (37%)
 Frame = +3

Query: 468  TXPPPPPXXXXXXPPPXXXFXXGGPXXAXXXP 563
            T PPPPP      PPP       GP      P
Sbjct: 1168 TPPPPPPLSPSLPPPPPPPPLPSGPPPQPAPP 1199


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,687,611
Number of Sequences: 37544
Number of extensions: 261269
Number of successful extensions: 2327
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 911
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1972
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1945321620
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)