Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP11_FL5_E04
(769 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
L35013-1|AAA60300.1| 424|Homo sapiens spliceosomal protein prot... 31 3.4
BC090883-1|AAH90883.1| 424|Homo sapiens splicing factor 3b, sub... 31 3.4
BC013886-1|AAH13886.1| 424|Homo sapiens splicing factor 3b, sub... 31 3.4
BC004273-1|AAH04273.1| 424|Homo sapiens splicing factor 3b, sub... 31 3.4
AL591493-2|CAI12554.1| 424|Homo sapiens splicing factor 3b, sub... 31 3.4
AL590487-2|CAI12648.1| 424|Homo sapiens splicing factor 3b, sub... 31 3.4
AK223322-1|BAD97042.1| 424|Homo sapiens splicing factor 3b, sub... 31 3.4
Y08765-1|CAA70018.1| 639|Homo sapiens SF1-Hl1 isoform protein. 30 7.9
L49380-1|AAB04033.1| 639|Homo sapiens transcription factor ZFM1... 30 7.9
BC054516-1|AAH54516.1| 666|Homo sapiens amyloid beta (A4) precu... 30 7.9
BC000773-1|AAH00773.1| 265|Homo sapiens Similar to zinc finger ... 30 7.9
AY152730-1|AAN75525.1| 665|Homo sapiens Rap1-interacting adapto... 30 7.9
AL160287-2|CAH70339.1| 666|Homo sapiens amyloid beta (A4) precu... 30 7.9
AB085852-1|BAC41256.1| 666|Homo sapiens proline-rich protein 73... 30 7.9
>L35013-1|AAA60300.1| 424|Homo sapiens spliceosomal protein
protein.
Length = 424
Score = 31.5 bits (68), Expect = 3.4
Identities = 16/42 (38%), Positives = 17/42 (40%)
Frame = +1
Query: 628 PPXXXXKKIXPPGXKXPXFXRGPPXFXPPPPXXXGXXGGXPP 753
PP + PPG P G P PPPP G G PP
Sbjct: 239 PPGSFPPPVPPPGALPP----GIPPAMPPPPMPPGAAGHGPP 276
>BC090883-1|AAH90883.1| 424|Homo sapiens splicing factor 3b,
subunit 4, 49kDa protein.
Length = 424
Score = 31.5 bits (68), Expect = 3.4
Identities = 16/42 (38%), Positives = 17/42 (40%)
Frame = +1
Query: 628 PPXXXXKKIXPPGXKXPXFXRGPPXFXPPPPXXXGXXGGXPP 753
PP + PPG P G P PPPP G G PP
Sbjct: 239 PPGSFPPPVPPPGALPP----GIPPAMPPPPMPPGAAGHGPP 276
>BC013886-1|AAH13886.1| 424|Homo sapiens splicing factor 3b,
subunit 4, 49kDa protein.
Length = 424
Score = 31.5 bits (68), Expect = 3.4
Identities = 16/42 (38%), Positives = 17/42 (40%)
Frame = +1
Query: 628 PPXXXXKKIXPPGXKXPXFXRGPPXFXPPPPXXXGXXGGXPP 753
PP + PPG P G P PPPP G G PP
Sbjct: 239 PPGSFPPPVPPPGALPP----GIPPAMPPPPMPPGAAGHGPP 276
>BC004273-1|AAH04273.1| 424|Homo sapiens splicing factor 3b,
subunit 4, 49kDa protein.
Length = 424
Score = 31.5 bits (68), Expect = 3.4
Identities = 16/42 (38%), Positives = 17/42 (40%)
Frame = +1
Query: 628 PPXXXXKKIXPPGXKXPXFXRGPPXFXPPPPXXXGXXGGXPP 753
PP + PPG P G P PPPP G G PP
Sbjct: 239 PPGSFPPPVPPPGALPP----GIPPAMPPPPMPPGAAGHGPP 276
>AL591493-2|CAI12554.1| 424|Homo sapiens splicing factor 3b,
subunit 4, 49kDa protein.
Length = 424
Score = 31.5 bits (68), Expect = 3.4
Identities = 16/42 (38%), Positives = 17/42 (40%)
Frame = +1
Query: 628 PPXXXXKKIXPPGXKXPXFXRGPPXFXPPPPXXXGXXGGXPP 753
PP + PPG P G P PPPP G G PP
Sbjct: 239 PPGSFPPPVPPPGALPP----GIPPAMPPPPMPPGAAGHGPP 276
>AL590487-2|CAI12648.1| 424|Homo sapiens splicing factor 3b,
subunit 4, 49kDa protein.
Length = 424
Score = 31.5 bits (68), Expect = 3.4
Identities = 16/42 (38%), Positives = 17/42 (40%)
Frame = +1
Query: 628 PPXXXXKKIXPPGXKXPXFXRGPPXFXPPPPXXXGXXGGXPP 753
PP + PPG P G P PPPP G G PP
Sbjct: 239 PPGSFPPPVPPPGALPP----GIPPAMPPPPMPPGAAGHGPP 276
>AK223322-1|BAD97042.1| 424|Homo sapiens splicing factor 3b,
subunit 4 variant protein.
Length = 424
Score = 31.5 bits (68), Expect = 3.4
Identities = 16/42 (38%), Positives = 17/42 (40%)
Frame = +1
Query: 628 PPXXXXKKIXPPGXKXPXFXRGPPXFXPPPPXXXGXXGGXPP 753
PP + PPG P G P PPPP G G PP
Sbjct: 239 PPGSFPPPVPPPGALPP----GIPPAMPPPPMPPGAAGHGPP 276
>Y08765-1|CAA70018.1| 639|Homo sapiens SF1-Hl1 isoform protein.
Length = 639
Score = 30.3 bits (65), Expect = 7.9
Identities = 13/32 (40%), Positives = 14/32 (43%)
Frame = +1
Query: 658 PPGXKXPXFXRGPPXFXPPPPXXXGXXGGXPP 753
PPG + P PP PPPP G PP
Sbjct: 570 PPGVQPPLPPGAPPPPPPPPPGSAGMMYAPPP 601
>L49380-1|AAB04033.1| 639|Homo sapiens transcription factor ZFM1
protein.
Length = 639
Score = 30.3 bits (65), Expect = 7.9
Identities = 13/32 (40%), Positives = 14/32 (43%)
Frame = +1
Query: 658 PPGXKXPXFXRGPPXFXPPPPXXXGXXGGXPP 753
PPG + P PP PPPP G PP
Sbjct: 570 PPGVQPPLPPGAPPPPPPPPPVSAGMMYAPPP 601
>BC054516-1|AAH54516.1| 666|Homo sapiens amyloid beta (A4)
precursor protein-binding, family B, member 1
interacting pro protein.
Length = 666
Score = 30.3 bits (65), Expect = 7.9
Identities = 14/39 (35%), Positives = 16/39 (41%)
Frame = +1
Query: 628 PPXXXXKKIXPPGXKXPXFXRGPPXFXPPPPXXXGXXGG 744
PP ++ PP P F PP F PPPP G
Sbjct: 560 PPPLDDPELPPP---PPDFMEPPPDFVPPPPPSYAGIAG 595
>BC000773-1|AAH00773.1| 265|Homo sapiens Similar to zinc finger
protein 162 protein.
Length = 265
Score = 30.3 bits (65), Expect = 7.9
Identities = 13/32 (40%), Positives = 14/32 (43%)
Frame = +1
Query: 658 PPGXKXPXFXRGPPXFXPPPPXXXGXXGGXPP 753
PPG + P PP PPPP G PP
Sbjct: 196 PPGVQPPLPPGAPPPPPPPPPGSAGMMYAPPP 227
>AY152730-1|AAN75525.1| 665|Homo sapiens Rap1-interacting adaptor
molecule protein.
Length = 665
Score = 30.3 bits (65), Expect = 7.9
Identities = 14/39 (35%), Positives = 16/39 (41%)
Frame = +1
Query: 628 PPXXXXKKIXPPGXKXPXFXRGPPXFXPPPPXXXGXXGG 744
PP ++ PP P F PP F PPPP G
Sbjct: 560 PPPLDDPELPPP---PPDFMEPPPDFVPPPPPSYAGIAG 595
>AL160287-2|CAH70339.1| 666|Homo sapiens amyloid beta (A4)
precursor protein-binding, family B, member 1
interacting pro protein.
Length = 666
Score = 30.3 bits (65), Expect = 7.9
Identities = 14/39 (35%), Positives = 16/39 (41%)
Frame = +1
Query: 628 PPXXXXKKIXPPGXKXPXFXRGPPXFXPPPPXXXGXXGG 744
PP ++ PP P F PP F PPPP G
Sbjct: 560 PPPLDDPELPPP---PPDFMEPPPDFVPPPPPSYAGIAG 595
>AB085852-1|BAC41256.1| 666|Homo sapiens proline-rich protein 73
protein.
Length = 666
Score = 30.3 bits (65), Expect = 7.9
Identities = 14/39 (35%), Positives = 16/39 (41%)
Frame = +1
Query: 628 PPXXXXKKIXPPGXKXPXFXRGPPXFXPPPPXXXGXXGG 744
PP ++ PP P F PP F PPPP G
Sbjct: 560 PPPLDDPELPPP---PPDFMEPPPDFVPPPPPSYAGIAG 595
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 99,046,456
Number of Sequences: 237096
Number of extensions: 2206048
Number of successful extensions: 8007
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 3424
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6263
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 9255747988
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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